Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 0.0e+00 1327.0 669 100.0
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 0.0e+00 1284.2 671 97.0
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 3.1e-117 426.8 704 43.9
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 6.1e-97 359.4 635 42.7
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 8.5e-83 312.4 624 39.1
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 1.0e-80 305.4 630 37.6
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 1.0e-80 305.4 661 37.2
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 1.6e-76 291.6 618 38.7
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 5.2e-72 276.6 624 36.4
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 6.3e-70 269.6 627 36.4
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 5.4e-69 266.5 646 35.9
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 4.2e-66 256.9 640 35.5
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 5.5e-66 256.5 644 36.2
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 7.2e-66 256.1 672 35.1
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.2e-65 255.4 640 35.2
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 2.8e-65 254.2 618 37.5
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 4.7e-65 253.4 632 33.7
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 8.0e-65 252.7 624 36.2
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 3.4e-63 247.3 651 34.4
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 1.7e-62 245.0 616 35.6
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 9.2e-61 239.2 621 34.1
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 3.5e-60 237.3 649 31.7
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 3.5e-60 237.3 651 34.1
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 3.8e-59 233.8 650 32.3
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 6.6e-59 233.0 666 34.7
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 1.5e-58 231.9 620 32.9
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 2.1e-57 228.0 666 32.9
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 1.0e-56 225.7 632 32.3
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 2.6e-55 221.1 674 30.7
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 5.8e-55 219.9 619 33.1
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.3e-54 218.8 630 33.5
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 2.9e-54 217.6 670 31.6
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 8.3e-54 216.1 615 32.2
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.1e-53 215.7 625 33.3
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 2.4e-53 214.5 361 39.9
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 2.4e-53 214.5 677 31.3
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 7.0e-53 213.0 677 31.0
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 7.0e-53 213.0 627 32.2
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 1.6e-52 211.8 673 30.3
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 2.7e-52 211.1 674 31.0
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 4.6e-52 210.3 677 31.8
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 7.8e-52 209.5 627 32.5
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.0e-51 209.1 657 31.1
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 1.3e-51 208.8 653 31.7
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 1.7e-51 208.4 323 42.4
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 8.6e-51 206.1 640 30.5
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 3.3e-50 204.1 622 32.6
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 4.3e-50 203.8 607 31.3
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 6.2e-49 199.9 589 31.4
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 6.8e-48 196.4 563 33.4
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.8e-48 196.4 701 30.4
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 2.0e-47 194.9 609 32.2
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 5.8e-47 193.4 703 28.0
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 5.8e-47 193.4 623 30.0
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.7e-46 191.8 700 30.1
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 2.2e-46 191.4 609 31.5
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 6.4e-46 189.9 626 30.0
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 1.1e-45 189.1 355 35.8
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 1.4e-45 188.7 319 37.6
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 7.0e-45 186.4 697 30.3
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 1.6e-44 185.3 626 29.9
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.5e-44 184.1 695 29.5
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 4.6e-44 183.7 285 39.3
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 4.6e-44 183.7 351 36.5
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 7.8e-44 183.0 622 31.2
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 1.7e-43 181.8 616 28.7
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 3.9e-43 180.6 625 31.2
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 2.1e-41 174.9 302 36.8
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 4.7e-41 173.7 309 34.6
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 6.2e-41 173.3 385 34.8
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 1.8e-40 171.8 310 38.4
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 2.3e-40 171.4 623 29.1
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 4.0e-40 170.6 328 35.7
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 6.8e-40 169.9 322 36.0
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 1.5e-39 168.7 616 30.7
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 2.0e-39 168.3 670 27.6
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 5.8e-39 166.8 684 27.8
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 2.9e-38 164.5 511 29.0
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 4.9e-38 163.7 352 33.5
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 1.9e-37 161.8 297 37.0
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 3.2e-37 161.0 571 30.8
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 3.2e-37 161.0 266 37.6
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 4.1e-37 160.6 611 28.6
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 5.4e-37 160.2 305 37.7
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 7.1e-37 159.8 297 36.7
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 9.2e-37 159.5 597 30.0
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 1.6e-36 158.7 679 27.5
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 4.6e-36 157.1 367 33.0
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 4.6e-36 157.1 464 31.0
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 7.8e-36 156.4 492 30.5
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 7.8e-36 156.4 652 27.8
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 1.3e-35 155.6 570 30.4
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 1.7e-35 155.2 347 33.7
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 2.3e-35 154.8 509 30.3
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 3.0e-35 154.5 578 28.2
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 3.9e-35 154.1 297 36.0
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 3.9e-35 154.1 489 29.4
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 5.1e-35 153.7 347 33.4
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 6.6e-35 153.3 486 30.9
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 6.6e-35 153.3 322 32.6
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 8.6e-35 152.9 508 30.1
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 1.1e-34 152.5 361 34.9
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 2.5e-34 151.4 491 30.3
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 5.6e-34 150.2 490 30.6
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 7.3e-34 149.8 513 30.0
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 1.6e-33 148.7 307 32.6
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 6.2e-33 146.7 478 28.5
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 1.1e-32 146.0 513 29.8
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 1.1e-32 146.0 651 28.3
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 2.0e-31 141.7 341 32.8
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 3.4e-31 141.0 298 35.6
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 6.4e-30 136.7 300 34.7
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 7.1e-29 133.3 656 28.0
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 8.7e-27 126.3 446 30.5
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 1.2e-20 105.9 151 42.4
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 2.8e-17 94.7 440 23.6
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 7.6e-15 86.7 141 39.0
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 3.2e-13 81.3 471 27.4
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 4.2e-13 80.9 168 34.5
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 1.3e-11 75.9 250 26.0
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 1.9e-10 72.0 256 27.0
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.4e-08 65.9 70 47.1


User provided reference genes

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