Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 2.8e-42 174.9 88 100.0
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 3.4e-40 167.9 88 96.6
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 1.6e-34 149.1 86 84.9
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.6e-34 149.1 86 82.6
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 3.7e-34 147.9 86 83.7
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 3.7e-34 147.9 85 84.7
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 3.7e-34 147.9 87 81.6
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 6.2e-34 147.1 85 80.0
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 1.4e-33 146.0 86 81.4
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.4e-33 146.0 85 83.5
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 2.4e-33 145.2 85 82.4
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 3.1e-33 144.8 86 81.4
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 3.1e-33 144.8 86 81.4
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 4.0e-33 144.4 87 79.3
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 4.0e-33 144.4 87 79.3
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 4.0e-33 144.4 87 79.3
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 5.3e-33 144.1 87 79.3
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 6.9e-33 143.7 86 80.2
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 6.9e-33 143.7 86 79.1
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 9.0e-33 143.3 85 80.0
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 1.2e-32 142.9 86 79.1
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 1.2e-32 142.9 86 81.4
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 1.5e-32 142.5 86 79.1
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 1.5e-32 142.5 85 78.8
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.5e-32 142.5 86 80.2
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 1.5e-32 142.5 86 80.2
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 2.0e-32 142.1 86 79.1
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 2.0e-32 142.1 86 77.9
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 2.0e-32 142.1 87 78.2
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 2.6e-32 141.7 86 77.9
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 2.6e-32 141.7 86 79.1
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.6e-32 141.7 86 79.1
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.6e-32 141.7 86 79.1
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 2.6e-32 141.7 87 79.3
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 3.4e-32 141.4 86 80.2
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 3.4e-32 141.4 85 81.2
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 3.4e-32 141.4 84 78.6
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 3.4e-32 141.4 87 78.2
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 4.5e-32 141.0 86 76.7
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 5.8e-32 140.6 87 75.9
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 5.8e-32 140.6 85 77.6
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 5.8e-32 140.6 85 77.6
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 5.8e-32 140.6 85 77.6
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 5.8e-32 140.6 86 77.9
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 7.6e-32 140.2 86 77.9
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 7.6e-32 140.2 87 81.6
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 7.6e-32 140.2 86 77.9
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 7.6e-32 140.2 85 80.0
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 7.6e-32 140.2 84 81.0
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 7.6e-32 140.2 86 76.7
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 9.9e-32 139.8 86 76.7
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 9.9e-32 139.8 86 79.1
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 1.3e-31 139.4 85 78.8
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 1.7e-31 139.0 86 77.9
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 1.7e-31 139.0 86 77.9
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 2.2e-31 138.7 87 77.0
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 3.8e-31 137.9 86 76.7
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 4.9e-31 137.5 87 77.0
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 4.9e-31 137.5 85 76.5
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 4.9e-31 137.5 87 75.9
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 6.4e-31 137.1 87 73.6
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 1.9e-30 135.6 81 77.8
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 2.5e-30 135.2 84 77.4
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 2.5e-30 135.2 86 75.6
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 2.5e-30 135.2 84 77.4
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 3.2e-30 134.8 86 75.6
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 7.1e-30 133.7 85 72.9
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 7.1e-30 133.7 85 75.3
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 9.3e-30 133.3 97 70.1
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 1.2e-29 132.9 85 75.3
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 1.6e-29 132.5 84 76.2
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 1.6e-29 132.5 86 72.1
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 2.7e-29 131.7 84 75.0
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 2.7e-29 131.7 84 75.0
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 2.7e-29 131.7 84 75.0
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 2.7e-29 131.7 84 75.0
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 2.7e-29 131.7 84 75.0
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 3.5e-29 131.3 84 75.0
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 4.6e-29 131.0 84 73.8
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 4.6e-29 131.0 86 74.4
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 1.3e-28 129.4 84 73.8
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.9e-28 127.9 98 66.3
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 4.3e-27 124.4 123 53.7
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 9.6e-27 123.2 69 84.1
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 2.8e-26 121.7 74 78.4
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 1.1e-25 119.8 69 82.6
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 2.4e-25 118.6 68 85.3
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.5e-24 115.9 67 82.1
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 7.6e-24 113.6 67 79.1
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 3.8e-23 111.3 66 81.8
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 4.9e-23 110.9 62 83.9
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 6.5e-23 110.5 71 73.2
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 8.4e-23 110.2 69 72.5
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 8.4e-23 110.2 68 76.5
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 8.4e-23 110.2 68 76.5
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 1.1e-22 109.8 68 76.5
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 5.5e-22 107.5 63 82.5
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 7.1e-22 107.1 64 78.1
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 9.3e-22 106.7 64 76.6
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 2.1e-21 105.5 67 71.6
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 6.1e-21 104.0 65 76.9
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 2.3e-20 102.1 79 58.2
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 8.7e-20 100.1 84 58.3
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 8.7e-20 100.1 63 73.0
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 2.8e-18 95.1 77 59.7
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 2.2e-15 85.5 67 67.2
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 6.5e-15 84.0 63 60.3
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 7.2e-14 80.5 45 77.8
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 4.3e-11 71.2 86 50.0
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 1.1e-09 66.6 70 44.3
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 9.1e-09 63.5 70 47.1


User provided reference genes

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