Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 7.0e-143 510.8 288 100.0
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 1.4e-71 273.9 242 75.6
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 3.0e-69 266.2 239 75.3
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 2.0e-25 120.6 107 71.0
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 3.6e-22 109.8 166 50.0
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.8e-21 107.5 237 44.7
PSO339G1213 Papaver somniferum HOM05D003570 ORTHO05D004207 2.3e-21 107.1 108 64.8
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 1.2e-20 104.8 237 44.3
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 1.3e-19 101.3 240 37.9
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 1.3e-19 101.3 254 39.8
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 2.2e-19 100.5 248 38.3
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 2.9e-19 100.1 243 40.7
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.4e-18 97.1 244 36.5
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 2.4e-18 97.1 237 43.0
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 3.2e-18 96.7 245 38.8
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 4.1e-18 96.3 250 40.4
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 1.2e-17 94.7 234 41.9
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 1.2e-17 94.7 241 40.2
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 1.6e-17 94.4 241 40.2
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 2.0e-17 94.0 239 42.3
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 3.5e-17 93.2 243 38.7
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 1.1e-15 88.2 236 35.6
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 7.3e-15 85.5 250 36.4
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.2e-14 84.7 242 35.1
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 1.2e-14 84.7 257 32.7
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 2.8e-14 83.6 118 44.9
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 2.8e-14 83.6 239 39.7
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 4.7e-14 82.8 245 37.6
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.1e-13 81.6 243 36.2
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 1.4e-13 81.3 271 31.4
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 1.4e-13 81.3 240 37.5
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 1.8e-13 80.9 114 41.2
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 1.8e-13 80.9 237 39.2
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 2.3e-13 80.5 244 34.0
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.2e-12 78.2 243 38.3
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 1.2e-12 78.2 237 35.9
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 1.2e-12 78.2 247 35.6
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 1.5e-12 77.8 232 34.9
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 2.0e-12 77.4 238 35.3
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.6e-12 77.0 241 34.0
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 3.4e-12 76.6 106 41.5
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 5.8e-12 75.9 241 34.0
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 5.8e-12 75.9 233 30.5
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 9.8e-12 75.1 269 35.7
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 9.8e-12 75.1 241 33.6
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 2.2e-11 73.9 233 36.5
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.2e-11 73.9 274 29.6
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 2.2e-11 73.9 114 42.1
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 2.9e-11 73.6 241 33.6
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 3.7e-11 73.2 249 34.5
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 4.9e-11 72.8 243 32.9
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 4.9e-11 72.8 114 43.0
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 4.9e-11 72.8 247 35.2
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 1.1e-10 71.6 243 33.7
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 1.9e-10 70.9 232 39.7
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 2.4e-10 70.5 110 40.0
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 2.4e-10 70.5 239 31.8
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 3.2e-10 70.1 251 32.7
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 3.2e-10 70.1 250 36.8
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 4.1e-10 69.7 233 36.5
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 4.1e-10 69.7 271 33.9
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 7.1e-10 68.9 239 33.1
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 9.2e-10 68.6 110 40.0
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 9.2e-10 68.6 233 34.8
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 1.6e-09 67.8 228 38.2
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 2.1e-09 67.4 244 32.8
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.7e-09 67.0 111 36.9
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 2.7e-09 67.0 225 37.3
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 3.5e-09 66.6 251 31.5
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 3.5e-09 66.6 107 41.1
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.5e-09 66.6 251 29.5
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 3.5e-09 66.6 109 39.4
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 4.6e-09 66.2 233 33.9
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 6.0e-09 65.9 233 35.2
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 7.8e-09 65.5 233 36.1
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 7.8e-09 65.5 245 31.8
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.3e-08 64.7 112 39.3
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.3e-08 64.7 239 31.8
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 3.0e-08 63.5 111 38.7
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 5.1e-08 62.8 37 83.8
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 5.1e-08 62.8 283 31.8
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 1.1e-07 61.6 110 36.4
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 1.1e-07 61.6 229 37.1
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 1.1e-07 61.6 205 38.5
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 1.5e-07 61.2 230 29.6
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 1.5e-07 61.2 109 37.6
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 1.9e-07 60.8 232 33.2
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 4.3e-07 59.7 212 34.9
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 5.6e-07 59.3 74 40.5
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 7.3e-07 58.9 107 34.6
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.1e-06 57.4 244 27.0
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 2.8e-06 57.0 91 39.6
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 3.6e-06 56.6 239 27.6
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 6.2e-06 55.8 101 37.6
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 6.2e-06 55.8 250 30.8


User provided reference genes

Program Settings