Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 3016.9 1501 100.0
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 2933.7 1501 97.4
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 0.0e+00 1805.4 1531 60.7
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 0.0e+00 1800.8 1525 60.9
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 0.0e+00 1745.7 1561 58.2
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 0.0e+00 1737.2 1412 63.3
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 0.0e+00 1710.7 1528 59.0
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 0.0e+00 1697.2 1517 57.7
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 0.0e+00 1676.8 1520 57.5
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 0.0e+00 1671.0 1518 57.3
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 0.0e+00 1664.0 1568 57.1
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 0.0e+00 1662.9 1519 57.7
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 0.0e+00 1659.8 1556 56.7
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 0.0e+00 1640.2 1516 56.3
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 0.0e+00 1636.7 1525 57.0
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 0.0e+00 1625.9 1515 56.4
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 0.0e+00 1613.2 1470 57.6
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1611.7 1537 56.0
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 0.0e+00 1610.1 1515 55.8
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 0.0e+00 1606.3 1522 56.0
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 0.0e+00 1605.5 1477 57.7
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 0.0e+00 1599.3 1523 56.0
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1597.8 1495 56.4
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1595.5 1524 56.0
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1591.2 1516 55.9
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1588.2 1541 54.8
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 0.0e+00 1583.5 1516 55.7
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 0.0e+00 1578.1 1529 55.3
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 0.0e+00 1560.0 1559 54.5
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1557.0 1619 51.9
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 0.0e+00 1545.0 1551 54.4
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1519.6 1611 51.5
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 0.0e+00 1518.1 1517 53.1
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 0.0e+00 1515.4 1511 53.5
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 0.0e+00 1508.8 1558 53.1
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1508.4 1542 53.0
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 0.0e+00 1508.4 1530 52.5
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 0.0e+00 1503.0 1533 51.6
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 0.0e+00 1502.3 1520 52.5
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1499.2 1523 52.7
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1493.4 1521 52.7
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 0.0e+00 1493.4 1537 52.7
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 0.0e+00 1493.0 1541 52.8
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 0.0e+00 1486.5 1519 53.4
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1485.3 1528 52.2
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 0.0e+00 1484.5 1524 52.2
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 0.0e+00 1480.7 1539 51.9
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 0.0e+00 1478.0 1517 52.3
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 0.0e+00 1477.6 1539 51.9
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 0.0e+00 1474.1 1532 52.7
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 0.0e+00 1464.9 1547 51.9
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1459.5 1527 51.7
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1457.6 1514 51.8
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1456.8 1521 51.7
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 0.0e+00 1455.3 1517 52.1
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1451.8 1515 51.7
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 0.0e+00 1449.9 1533 51.7
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 0.0e+00 1448.3 1580 50.8
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 0.0e+00 1445.3 1588 50.6
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 0.0e+00 1439.9 1517 51.5
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1436.4 1509 51.5
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 0.0e+00 1435.6 1508 52.1
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1434.5 1507 51.8
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 0.0e+00 1433.7 1489 52.0
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 0.0e+00 1431.4 1500 51.3
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1426.8 1495 50.4
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 0.0e+00 1426.8 1528 50.9
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1423.7 1523 50.0
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 0.0e+00 1419.8 1518 51.2
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1408.3 1508 51.0
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1408.3 1508 51.0
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1406.7 1527 50.9
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 0.0e+00 1406.7 1536 51.0
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 0.0e+00 1406.0 1508 51.0
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1405.6 1519 50.6
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 0.0e+00 1402.1 1544 49.7
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 0.0e+00 1399.8 1527 50.4
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1387.9 1521 50.0
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1385.9 1356 55.4
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 0.0e+00 1384.8 1518 50.4
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 0.0e+00 1381.3 1512 49.9
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 0.0e+00 1380.9 1577 49.3
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 0.0e+00 1377.5 1521 49.1
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 0.0e+00 1372.8 1523 50.0
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 0.0e+00 1364.0 1540 49.7
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1310.8 1351 53.4
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 0.0e+00 1310.0 1408 50.6
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 0.0e+00 1278.1 1535 48.1
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 0.0e+00 1276.2 1546 46.6
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 0.0e+00 1268.4 1353 51.3
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 0.0e+00 1246.5 1297 52.3
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1189.5 1456 47.0
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 0.0e+00 1157.1 1551 44.0
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 0.0e+00 1140.9 1130 54.4
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 1.6e-307 1060.1 1091 53.2
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 2.6e-273 946.4 991 51.1
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 2.9e-272 943.0 1634 37.3
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 2.8e-206 723.8 908 45.5
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 3.5e-185 653.7 1516 31.1
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.4e-178 631.7 483 67.3
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 3.2e-178 630.6 483 65.8
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 3.9e-176 623.6 1031 38.2
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 1.1e-149 535.8 680 44.7
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 1.0e-104 386.3 403 50.9
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 3.6e-81 308.1 593 34.2
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 5.1e-51 208.0 190 53.2
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 6.4e-46 191.0 163 61.3
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 5.1e-35 154.8 107 65.4
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 4.6e-28 131.7 91 62.6
SEGI_11223 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 4.8e-25 121.7 86 70.9
SEGI_38420 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 4.8e-25 121.7 86 70.9
Actinidia27361 Actinidia chinensis HOM05D006693 ORTHO05D008092 3.4e-23 115.5 107 54.2
CAN.G532.47 Capsicum annuum HOM05D006693 ORTHO05D008092 8.4e-22 110.9 93 54.8
Cpa.g.sc180.3 Carica papaya HOM05D006693 ORTHO05D008092 3.5e-20 105.5 81 65.4
Cpa.g.c42974 Carica papaya HOM05D006693 ORTHO05D008092 4.6e-20 105.1 98 55.1
Actinidia33728 Actinidia chinensis HOM05D006693 ORTHO05D008092 2.0e-15 89.7 67 77.6
Actinidia33727 Actinidia chinensis HOM05D006693 ORTHO05D008092 5.9e-07 61.6 87 42.5
Sabra01G0074000 Salix brachista HOM05D000115 ORTHO05D000464 3.8e-06 58.9 85 44.7


User provided reference genes

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