Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 2.9e-62 242.3 179 100.0
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 5.1e-51 204.9 179 79.3
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 1.1e-48 197.2 179 79.3
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 5.9e-47 191.4 173 72.8
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 1.3e-46 190.3 173 79.2
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 1.7e-46 189.9 173 78.0
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 1.7e-46 189.9 173 76.3
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 1.7e-46 189.9 173 78.0
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 6.5e-46 188.0 173 79.8
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 8.5e-46 187.6 175 73.7
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 1.4e-45 186.8 173 78.0
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 1.4e-45 186.8 173 84.4
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 2.5e-45 186.0 175 77.7
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 3.2e-45 185.7 173 82.1
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 5.5e-45 184.9 173 77.5
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 9.4e-45 184.1 175 74.9
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 1.2e-44 183.7 175 74.3
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 2.7e-44 182.6 181 71.8
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 2.7e-44 182.6 173 78.0
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 3.6e-44 182.2 173 78.0
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 4.6e-44 181.8 176 73.3
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 4.6e-44 181.8 176 72.2
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 6.1e-44 181.4 176 73.3
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 6.1e-44 181.4 173 76.3
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 7.9e-44 181.0 173 76.9
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 1.0e-43 180.6 176 73.9
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 1.0e-43 180.6 174 54.0
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 1.0e-43 180.6 173 76.3
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 1.4e-43 180.3 176 73.9
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 2.3e-43 179.5 175 75.4
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 2.3e-43 179.5 173 75.7
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 2.3e-43 179.5 173 76.3
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 3.0e-43 179.1 177 74.0
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 3.0e-43 179.1 173 76.3
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 3.0e-43 179.1 174 76.4
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 3.9e-43 178.7 175 74.9
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 3.9e-43 178.7 175 74.9
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 8.8e-43 177.6 173 74.6
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 8.8e-43 177.6 173 72.8
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 8.8e-43 177.6 173 75.7
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 8.8e-43 177.6 173 75.7
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 8.8e-43 177.6 173 76.3
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 1.1e-42 177.2 173 80.9
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 1.1e-42 177.2 175 74.9
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 1.1e-42 177.2 175 73.7
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 1.1e-42 177.2 175 73.7
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 1.5e-42 176.8 175 74.3
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 2.0e-42 176.4 173 75.7
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 3.3e-42 175.6 175 76.0
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 4.3e-42 175.3 173 72.3
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 4.3e-42 175.3 175 75.4
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 4.3e-42 175.3 173 75.7
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 5.7e-42 174.9 181 72.4
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 7.4e-42 174.5 173 52.0
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 7.4e-42 174.5 173 72.8
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 9.7e-42 174.1 173 73.4
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 9.7e-42 174.1 176 71.6
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 1.7e-41 173.3 173 68.8
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 1.7e-41 173.3 173 72.8
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 1.7e-41 173.3 173 74.6
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 2.2e-41 172.9 175 72.6
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 2.8e-41 172.6 173 75.1
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 3.7e-41 172.2 173 72.8
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 8.2e-41 171.0 173 72.3
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 1.1e-40 170.6 173 73.4
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 1.4e-40 170.2 175 71.4
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 1.4e-40 170.2 176 70.5
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 1.8e-40 169.9 176 70.5
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 2.4e-40 169.5 176 69.3
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 3.1e-40 169.1 175 73.1
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 1.2e-39 167.2 176 51.1
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 1.5e-39 166.8 181 69.6
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 1.5e-39 166.8 173 71.1
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 2.0e-39 166.4 173 75.1
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 7.7e-39 164.5 176 50.6
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 7.7e-39 164.5 176 50.6
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 7.7e-39 164.5 173 74.6
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 7.7e-39 164.5 175 72.6
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 1.3e-38 163.7 175 70.9
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 5.0e-38 161.8 173 68.8
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 1.1e-37 160.6 173 73.4
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.9e-37 159.8 196 44.9
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 2.5e-37 159.5 173 50.3
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 1.6e-36 156.8 191 72.3
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 7.9e-36 154.5 177 46.9
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 3.0e-35 152.5 246 38.6
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 3.0e-35 152.5 195 43.1
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 1.5e-34 150.2 155 75.5
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 7.4e-34 147.9 173 74.0
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 7.4e-34 147.9 204 56.9
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 1.4e-32 143.7 179 44.1
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.4e-32 143.7 169 46.2
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 2.0e-31 139.8 173 48.0
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 4.5e-31 138.7 159 71.1
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 4.5e-31 138.7 178 39.3
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 2.2e-30 136.3 177 42.4
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 3.2e-29 132.5 151 45.0
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 4.2e-29 132.1 175 41.7
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 6.1e-28 128.3 137 65.7
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 3.0e-27 125.9 76 73.7
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 2.0e-26 123.2 137 77.4
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 3.3e-26 122.5 137 70.8
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 1.7e-25 120.2 76 73.7
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 2.2e-25 119.8 175 40.6
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 8.2e-25 117.9 137 73.0
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 4.1e-24 115.5 77 71.4
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 9.1e-24 114.4 122 71.3
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 1.2e-23 114.0 77 70.1
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 4.5e-23 112.1 77 66.2
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 1.7e-22 110.2 77 64.9
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 2.9e-22 109.4 167 59.9
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 1.1e-21 107.5 77 63.6
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 8.0e-20 101.3 76 60.5
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 1.3e-17 94.0 118 44.1
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 2.8e-17 92.8 212 33.0
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 4.8e-17 92.0 119 43.7
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 2.0e-15 86.7 165 35.8
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 7.7e-15 84.7 133 39.1
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 1.4e-11 73.9 48 75.0
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 2.0e-10 70.1 115 35.7
CsaV3_1G031100 Cucumis sativus L. HOM05D006436 ORTHO05D008011 4.4e-10 68.9 48 70.8
QL03p022571 Quercus lobata HOM05D006436 ORTHO05D008011 3.5e-07 59.3 36 75.0


User provided reference genes

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