Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3796 Papaver somniferum HOM05D005505 ORTHO05D006974 6.6e-290 1000.0 497 100.0
PSO017G4123 Papaver somniferum HOM05D005505 ORTHO05D006974 1.2e-280 969.1 497 97.0
TAR636G3130 Trochodendron aralioides HOM05D005505 ORTHO05D006974 3.1e-199 698.7 510 69.0
Nn8g40056 Nelumbo nucifera HOM05D005505 ORTHO05D006974 4.7e-195 684.9 504 67.3
MBI10_g16825_MAGBIO Magnolia biondii HOM05D005505 ORTHO05D006974 2.0e-193 679.5 525 66.7
QL09p050425 Quercus lobata HOM05D005505 ORTHO05D006974 1.6e-190 669.8 510 65.1
Aqoxy2G03778 Aquilegia oxysepala HOM05D005505 ORTHO05D006974 3.8e-189 665.2 497 66.6
Ciclev10004754m.g Citrus clementina HOM05D005505 ORTHO05D006974 5.0e-189 664.8 506 64.2
Actinidia35954 Actinidia chinensis HOM05D005505 ORTHO05D006974 8.6e-189 664.1 509 65.4
Prupe.5G110900 Prunus persica HOM05D005505 ORTHO05D006974 1.1e-188 663.7 512 63.5
Thecc.04G209900 Theobroma cacao HOM05D005505 ORTHO05D006974 1.9e-188 662.9 504 64.5
CiPaw.02G067600 Carya illinoinensis HOM05D005505 ORTHO05D006974 2.5e-188 662.5 510 64.9
RcHm_v2.0_Chr7g0196051 Rosa chinensis HOM05D005505 ORTHO05D006974 1.5e-185 653.3 507 63.9
COL.COLO4_20306 Corchorus olitorius HOM05D005505 ORTHO05D006974 2.6e-185 652.5 502 63.5
Atru.chr4.1761 Acer truncatum HOM05D005505 ORTHO05D006974 1.7e-184 649.8 492 63.8
Gorai.006G220300 Gossypium raimondii HOM05D005505 ORTHO05D006974 3.7e-184 648.7 508 62.8
Manes.03G149700 Manihot esculenta HOM05D005505 ORTHO05D006974 3.7e-184 648.7 469 67.6
Gohir.A09G202800 Gossypium hirsutum HOM05D005505 ORTHO05D006974 8.3e-184 647.5 502 63.5
FAN18G0472 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.8e-183 646.4 507 63.9
vmacro00503 Vaccinium macrocarpon HOM05D005505 ORTHO05D006974 1.8e-183 646.4 507 63.1
TWI53G0062 Tripterygium wilfordii HOM05D005505 ORTHO05D006974 3.2e-183 645.6 508 63.8
Potri.001G051200 Populus trichocarpa HOM05D005505 ORTHO05D006974 5.4e-183 644.8 511 63.6
FAN13G1424 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.6e-182 643.3 507 63.5
MD06G1096300 Malus domestica HOM05D005505 ORTHO05D006974 2.0e-182 642.9 506 62.8
BcaB06g26566 Brassica carinata HOM05D005505 ORTHO05D006974 1.0e-181 640.6 500 63.4
Gohir.D09G196900 Gossypium hirsutum HOM05D005505 ORTHO05D006974 1.7e-181 639.8 502 62.7
Lalb_Chr19g0126031 Lupinus albus HOM05D005505 ORTHO05D006974 1.5e-180 636.7 508 62.2
FvH4_5g03680 Fragaria vesca HOM05D005505 ORTHO05D006974 2.5e-180 636.0 507 63.3
FAN13G2718 Fragaria x ananassa HOM05D005505 ORTHO05D006974 3.3e-180 635.6 515 62.7
DCAR_030788 Daucus carota HOM05D005505 ORTHO05D006974 9.5e-180 634.0 477 63.3
Rhsim09G0051500 Rhododendron simsii HOM05D005505 ORTHO05D006974 1.2e-179 633.6 565 57.7
TPR.G26848 Trifolium pratense HOM05D005505 ORTHO05D006974 1.2e-179 633.6 506 61.5
BcaC06g35602 Brassica carinata HOM05D005505 ORTHO05D006974 1.6e-179 633.3 504 62.3
BolC7t41801H Brassica oleracea HOM05D005505 ORTHO05D006974 2.1e-179 632.9 503 62.4
MELO3C016329.2 Cucumis melo HOM05D005505 ORTHO05D006974 2.1e-179 632.9 506 63.0
C07p13070 Brassica napus HOM05D005505 ORTHO05D006974 2.8e-179 632.5 503 62.4
A07p08370 Brassica napus HOM05D005505 ORTHO05D006974 3.6e-179 632.1 506 62.1
CANSAT21G2364 Cannabis sativa HOM05D005505 ORTHO05D006974 4.7e-179 631.7 508 62.0
THA.LOC104821613 Tarenaya hassleriana HOM05D005505 ORTHO05D006974 4.7e-179 631.7 469 65.9
C09p75660 Brassica napus HOM05D005505 ORTHO05D006974 6.2e-179 631.3 506 61.9
arahy.Tifrunner.gnm1.ann1.QX4MR3 Arachis hypogaea HOM05D005505 ORTHO05D006974 1.4e-178 630.2 502 62.0
arahy.Tifrunner.gnm1.ann1.ZRDJ5X Arachis hypogaea HOM05D005505 ORTHO05D006974 1.4e-178 630.2 502 62.2
Phvul.008G135500 Phaseolus vulgaris HOM05D005505 ORTHO05D006974 1.8e-178 629.8 508 61.0
CsaV3_4G006210 Cucumis sativus L. HOM05D005505 ORTHO05D006974 2.3e-178 629.4 506 62.8
Ca_07402_v3 Cicer arietinum L. HOM05D005505 ORTHO05D006974 4.0e-178 628.6 507 60.0
Duzib212G0911 Durio zibethinus HOM05D005505 ORTHO05D006974 5.2e-178 628.2 502 62.4
Thhalv10002522m.g Eutrema salsugineum HOM05D005505 ORTHO05D006974 5.2e-178 628.2 460 66.1
Lj1g0020537 Lotus japonicus HOM05D005505 ORTHO05D006974 1.2e-177 627.1 506 61.1
arahy.Tifrunner.gnm1.ann1.H9DAM7 Arachis hypogaea HOM05D005505 ORTHO05D006974 1.5e-177 626.7 502 61.8
BraA07t28623Z Brassica rapa HOM05D005505 ORTHO05D006974 1.5e-177 626.7 504 61.7
SalBow2G0189 Salvia bowleyana HOM05D005505 ORTHO05D006974 2.0e-177 626.3 460 66.5
Glyma.08G345200 Glycine max HOM05D005505 ORTHO05D006974 2.6e-177 625.9 507 60.9
FAN08G1440 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.3e-176 623.6 511 62.4
ATR0787G156 Amborella trichopoda HOM05D005505 ORTHO05D006974 3.7e-176 622.1 470 65.3
Sed0009691 Sechium edule HOM05D005505 ORTHO05D006974 6.4e-176 621.3 508 61.4
Medtr2g060550 Medicago truncatula HOM05D005505 ORTHO05D006974 1.9e-175 619.8 506 59.7
ClCG07G007730 Citrullus lanatus HOM05D005505 ORTHO05D006974 2.4e-175 619.4 530 59.8
Carub.0003s2430 Capsella rubella HOM05D005505 ORTHO05D006974 3.2e-175 619.0 509 61.1
Eucgr.H00086 Eucalyptus grandis HOM05D005505 ORTHO05D006974 3.2e-175 619.0 456 66.2
Sabra01G0035800 Salix brachista HOM05D005505 ORTHO05D006974 4.1e-175 618.6 593 55.6
CARHR099990 Cardamine hirsuta HOM05D005505 ORTHO05D006974 5.4e-175 618.2 497 62.2
Lj5g0018216 Lotus japonicus HOM05D005505 ORTHO05D006974 7.0e-175 617.8 505 60.6
Cc03_g07370 Coffea canephora HOM05D005505 ORTHO05D006974 9.2e-175 617.5 498 61.8
MSTRG.9830 Avicennia marina HOM05D005505 ORTHO05D006974 1.6e-174 616.7 505 62.2
HanXRQChr10g0278391 Helianthus annuus HOM05D005505 ORTHO05D006974 2.0e-174 616.3 509 60.5
PGR142G3770 Punica granatum HOM05D005505 ORTHO05D006974 2.0e-174 616.3 506 59.9
Psat7g176120 Pisum sativum HOM05D005505 ORTHO05D006974 2.7e-174 615.9 506 59.7
AT3G24200 Arabidopsis thaliana HOM05D005505 ORTHO05D006974 4.6e-174 615.1 469 64.4
Sopen09g034490 Solanum pennellii HOM05D005505 ORTHO05D006974 1.0e-173 614.0 483 64.6
Lalb_Chr03g0041191 Lupinus albus HOM05D005505 ORTHO05D006974 1.7e-173 613.2 510 60.8
Lsat_1_v5_gn_2_43080 Lactuca sativa HOM05D005505 ORTHO05D006974 3.9e-173 612.1 503 60.2
ECA233G0503 Erigeron canadensis HOM05D005505 ORTHO05D006974 5.0e-173 611.7 509 59.5
Solyc09g091570.2 Solanum lycopersicum HOM05D005505 ORTHO05D006974 5.0e-173 611.7 503 62.4
Psat3g151840 Pisum sativum HOM05D005505 ORTHO05D006974 8.6e-173 610.9 504 58.7
GSVIVG01012536001 Vitis vinifera HOM05D005505 ORTHO05D006974 8.6e-173 610.9 492 65.4
CAN.G500.70 Capsicum annuum HOM05D005505 ORTHO05D006974 9.5e-172 607.4 464 64.9
Migut.G00632 Erythranthe guttata HOM05D005505 ORTHO05D006974 3.6e-171 605.5 509 62.1
FAN04G0744 Fragaria x ananassa HOM05D005505 ORTHO05D006974 4.7e-171 605.1 507 60.2
FAN04G1715 Fragaria x ananassa HOM05D005505 ORTHO05D006974 4.7e-171 605.1 507 60.2
Sc24g0002560 Simmondsia chinensis HOM05D005505 ORTHO05D006974 1.4e-170 603.6 475 61.9
Nitab4.5_0000306g0020 Nicotiana tabacum HOM05D005505 ORTHO05D006974 1.8e-170 603.2 475 62.9
SGA_v2.0_scaffold380G50374 Striga asiatica HOM05D005505 ORTHO05D006974 3.1e-170 602.4 510 60.4
Aa31LG8G10580 Aethionema arabicum HOM05D005505 ORTHO05D006974 5.2e-170 601.7 509 59.1
Oeu026858.1 Olea europaea HOM05D005505 ORTHO05D006974 2.0e-169 599.7 452 65.9
SGA_v2.0_scaffold57G20149 Striga asiatica HOM05D005505 ORTHO05D006974 7.5e-169 597.8 515 60.2
Nitab4.5_0004881g0030 Nicotiana tabacum HOM05D005505 ORTHO05D006974 1.7e-168 596.7 468 63.0
AUR62025680 Chenopodium quinoa HOM05D005505 ORTHO05D006974 2.4e-167 592.8 458 64.6
Zm00001eb211070 Zea mays HOM05D005505 ORTHO05D006974 3.0e-165 585.9 489 59.9
AUR62001295 Chenopodium quinoa HOM05D005505 ORTHO05D006974 5.1e-165 585.1 454 63.7
Cpa.g.sc59.105 Carica papaya HOM05D005505 ORTHO05D006974 3.3e-164 582.4 557 54.9
Os03g0839100 Oryza sativa ssp. japonica HOM05D005505 ORTHO05D006974 5.6e-164 581.6 463 61.8
EL10Ac7g18096 Beta vulgaris HOM05D005505 ORTHO05D006974 1.6e-163 580.1 469 61.2
Medtr7g051960 Medicago truncatula HOM05D005505 ORTHO05D006974 1.6e-163 580.1 434 63.4
Peaxi162Scf00047g01039 Petunia axillaris HOM05D005505 ORTHO05D006974 5.2e-162 575.1 502 59.4
Sp3g21750 Schrenkiella parvula HOM05D005505 ORTHO05D006974 9.9e-161 570.9 457 62.4
PGSC0003DMG400029626 Solanum tuberosum HOM05D005505 ORTHO05D006974 2.9e-160 569.3 433 65.1
unitig_32.g10868 Utricularia gibba HOM05D005505 ORTHO05D006974 8.4e-160 567.8 462 58.7
Lj3C565G3 Lonicera japonica HOM05D005505 ORTHO05D006974 5.4e-159 565.1 435 63.2
Hund05658 Selenicereus undatus HOM05D005505 ORTHO05D006974 1.6e-158 563.5 511 56.9
Duzib151G0717 Durio zibethinus HOM05D005505 ORTHO05D006974 2.1e-158 563.1 501 57.5
Lj3A577G5 Lonicera japonica HOM05D005505 ORTHO05D006974 2.3e-157 559.7 544 54.0
SHI00938 Sapria himalayana HOM05D005505 ORTHO05D006974 1.9e-151 540.0 449 58.8
SEGI_35699 Sequoiadendron giganteum HOM05D005505 ORTHO05D006974 5.4e-151 538.5 475 57.1
MD14G1116500 Malus domestica HOM05D005505 ORTHO05D006974 3.5e-150 535.8 424 62.3
Haze_11578 Corylus avellana HOM05D005505 ORTHO05D006974 3.0e-141 506.1 355 69.6
Dinv38263 Davidia involucrata HOM05D005505 ORTHO05D006974 7.1e-135 485.0 379 65.7
BcaC05g30344 Brassica carinata HOM05D005505 ORTHO05D007330 9.3e-135 484.6 507 51.3
Lj3A578G8 Lonicera japonica HOM05D005505 ORTHO05D006974 2.8e-131 473.0 367 62.9
Lj3A579T16 Lonicera japonica HOM05D005505 ORTHO05D006974 2.0e-129 466.8 411 57.7
SpUn0001_0240 Schrenkiella parvula HOM05D005505 ORTHO05D006974 6.0e-126 455.3 446 52.7
CDE02G0375 Ceratophyllum demersum HOM05D005505 ORTHO05D006974 2.5e-124 449.9 387 58.9
Mapoly0028s0013 Marchantia polymorpha HOM05D005505 ORTHO05D006974 1.3e-117 427.6 492 45.9
Pp3c26_12110 Physcomitrium patens HOM05D005505 ORTHO05D006974 1.1e-116 424.5 457 49.5
SMO351G0576 Selaginella moellendorffii HOM05D005505 ORTHO05D006974 9.4e-111 404.8 439 48.3
SpUn0001_0260 Schrenkiella parvula HOM05D005505 ORTHO05D006974 3.8e-104 382.9 505 43.4
arahy.Tifrunner.gnm1.ann1.NU2AG4 Arachis hypogaea HOM05D005505 ORTHO05D006974 7.2e-103 378.6 360 53.6
Lj3A580T64 Lonicera japonica HOM05D005505 ORTHO05D006974 3.3e-100 369.8 387 52.2
Gohir.D09G197033 Gossypium hirsutum HOM05D005505 ORTHO05D006974 3.5e-89 333.2 277 58.5
Lj3A565G17 Lonicera japonica HOM05D005505 ORTHO05D006974 8.0e-86 322.0 320 53.8
MCO15G051 Micromonas commoda HOM05D005505 ORTHO05D006974 5.9e-81 305.8 461 39.3
Cre02.g112850 Chlamydomonas reinhardtii HOM05D005505 ORTHO05D006974 5.2e-69 266.2 463 36.1
HPP92_019865 Vanilla planifolia HOM05D005505 ORTHO05D006974 8.9e-69 265.4 464 38.1
CAN.G220.36 Capsicum annuum HOM05D005505 ORTHO05D006974 1.5e-68 264.6 395 42.8
AL3G39020 Arabidopsis lyrata HOM05D005505 ORTHO05D006974 3.2e-66 256.9 225 57.8
PRCOL_00000308 Prasinoderma coloniale HOM05D005505 ORTHO05D006974 6.2e-62 242.7 361 39.6
BolC5t35086H Brassica oleracea HOM05D005505 ORTHO05D006974 3.4e-60 236.9 219 54.8
Cfa022008 Carpinus fangiana HOM05D005505 ORTHO05D006974 1.1e-55 221.9 496 33.5
Lj3A566G16 Lonicera japonica HOM05D005505 ORTHO05D006974 5.2e-45 186.4 154 63.6
CBR_g34015 Chara braunii HOM05D005505 ORTHO05D006974 1.7e-40 171.4 248 41.5
CBR_g34017 Chara braunii HOM05D005505 ORTHO05D006974 2.1e-38 164.5 208 41.8
SpUn0242_NC2199 Schrenkiella parvula HOM05D005505 ORTHO05D006974 3.9e-32 143.7 100 67.0
Lj3A578G7 Lonicera japonica HOM05D005505 ORTHO05D006974 6.9e-29 132.9 89 71.9
Ca_29365_v3 Cicer arietinum L. HOM05D005505 ORTHO05D006974 1.7e-27 128.3 331 27.8
Haze_11577 Corylus avellana HOM05D005505 ORTHO05D006974 7.1e-26 122.9 148 50.7
Actinidia34626 Actinidia chinensis HOM05D005505 ORTHO05D006974 7.1e-18 96.3 106 52.8
Lj3A579T17 Lonicera japonica HOM05D005505 ORTHO05D006974 1.8e-13 81.6 64 65.6
CDE09G0201 Ceratophyllum demersum HOM05D000090 ORTHO05D001584 4.9e-11 73.6 49 75.5
AL3G39220 Arabidopsis lyrata HOM05D005505 ORTHO05D000101 1.4e-10 72.0 48 62.5
Cfa025560 Carpinus fangiana HOM05D005075 ORTHO05D122628 3.0e-08 64.3 409 23.2
Lj3A565T20 Lonicera japonica HOM05D005505 ORTHO05D006974 1.1e-07 62.4 65 55.4
HanXRQChr09g0238391 Helianthus annuus HOM05D000686 ORTHO05D000512 2.2e-06 58.2 402 21.4


User provided reference genes

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