Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 0.0e+00 1360.9 735 100.0
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.9e-184 650.2 856 48.8
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 1.2e-183 647.5 863 49.4
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.8e-179 633.6 818 49.1
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.6e-178 629.8 839 48.3
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 1.5e-176 624.0 847 48.1
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 4.5e-170 602.4 842 47.6
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 2.6e-165 586.6 899 44.3
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.4e-163 580.9 837 45.9
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 1.8e-163 580.5 762 48.0
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 4.2e-160 569.3 841 46.1
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 3.4e-157 559.7 837 45.0
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 7.5e-157 558.5 837 44.1
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.3e-156 557.8 853 44.1
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 6.3e-156 555.4 881 42.6
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 5.4e-155 552.4 803 45.6
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 1.7e-153 547.4 836 43.7
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 6.6e-153 545.4 838 43.8
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 2.5e-152 543.5 830 44.1
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 1.2e-151 541.2 824 44.1
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 8.0e-151 538.5 849 43.1
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 1.8e-150 537.3 815 47.5
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 4.4e-149 532.7 827 43.7
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 2.9e-148 530.0 813 43.7
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 3.7e-148 529.6 825 43.6
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 2.4e-147 526.9 797 44.3
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 2.4e-147 526.9 803 43.3
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 4.6e-146 522.7 733 45.8
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 4.6e-146 522.7 846 45.6
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 1.0e-145 521.5 844 42.7
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 1.5e-144 517.7 791 44.6
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 2.5e-144 516.9 832 42.1
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 1.6e-143 514.2 860 41.6
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 2.8e-143 513.5 856 42.1
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 6.2e-143 512.3 830 41.1
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 1.1e-142 511.5 844 42.8
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 1.4e-142 511.1 830 42.7
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 3.1e-142 510.0 838 41.4
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 6.8e-142 508.8 818 41.8
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 1.3e-140 504.6 840 41.1
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 1.4e-139 501.1 853 40.9
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 2.4e-139 500.4 850 41.6
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 1.6e-138 497.7 811 42.9
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 2.1e-138 497.3 853 40.9
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 2.7e-138 496.9 824 40.2
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 1.0e-137 495.0 833 39.9
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 1.1e-136 491.5 834 40.4
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 1.5e-136 491.1 846 40.1
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 1.5e-136 491.1 832 40.4
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 2.5e-136 490.3 838 41.2
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 4.3e-136 489.6 842 41.1
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 5.6e-136 489.2 801 41.2
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 9.5e-136 488.4 827 44.7
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 2.8e-135 486.9 851 39.6
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.4e-134 484.6 827 44.7
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 2.3e-134 483.8 806 40.6
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 5.2e-134 482.6 791 41.0
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 6.8e-134 482.3 764 43.3
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 8.9e-134 481.9 832 44.2
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 9.9e-133 478.4 875 40.1
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.7e-132 477.6 813 40.2
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 1.4e-131 474.6 834 40.5
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 1.9e-131 474.2 815 41.2
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 3.2e-131 473.4 842 43.2
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 5.4e-131 472.6 710 44.8
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 4.6e-130 469.5 832 40.5
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.0e-129 468.4 771 45.0
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 8.6e-129 465.3 823 39.7
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 1.5e-128 464.5 811 39.5
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 1.2e-127 461.5 841 40.0
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.6e-127 461.1 773 42.3
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.1e-126 458.4 823 39.7
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 1.1e-126 458.4 807 39.5
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 1.8e-126 457.6 813 40.7
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 2.4e-126 457.2 853 38.0
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 5.2e-126 456.1 816 39.1
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 6.8e-126 455.7 816 40.6
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 8.9e-126 455.3 813 39.5
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 9.9e-125 451.8 751 39.3
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.9e-124 450.3 833 41.7
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 6.4e-124 449.1 767 40.2
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 2.4e-123 447.2 884 38.3
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.6e-122 444.5 837 43.0
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 2.7e-122 443.7 773 40.5
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 7.8e-122 442.2 814 39.6
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.3e-121 441.4 751 40.7
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 5.1e-121 439.5 802 39.8
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 6.6e-121 439.1 837 42.8
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 1.1e-120 438.3 730 39.9
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 1.5e-120 438.0 809 39.9
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 7.3e-120 435.6 829 37.9
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 3.6e-119 433.3 765 41.2
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 3.6e-119 433.3 785 40.5
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 8.1e-119 432.2 837 42.4
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 8.1e-119 432.2 799 39.0
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 1.8e-118 431.0 793 38.5
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 4.0e-118 429.9 739 41.1
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 5.3e-118 429.5 813 39.2
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 3.2e-115 420.2 838 41.2
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 5.4e-115 419.5 692 42.1
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 4.6e-114 416.4 816 41.7
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 1.9e-112 411.0 701 41.1
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 3.3e-112 410.2 755 38.8
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 5.6e-112 409.5 763 38.3
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 2.1e-111 407.5 706 40.1
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 2.8e-111 407.1 766 38.3
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 4.8e-111 406.4 696 41.2
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 2.0e-109 401.0 775 39.2
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 2.0e-109 401.0 838 37.2
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 1.3e-108 398.3 741 39.5
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 1.3e-105 388.3 783 37.0
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 8.7e-105 385.6 687 40.6
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 2.1e-103 380.9 809 36.3
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 5.3e-102 376.3 820 36.7
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 5.8e-101 372.9 643 40.7
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 1.2e-98 365.2 633 40.1
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 3.0e-97 360.5 712 39.0
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 1.9e-96 357.8 687 39.2
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 7.4e-96 355.9 654 38.8
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 8.2e-95 352.4 659 38.4
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.8e-94 351.3 691 39.4
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 5.3e-94 349.7 669 38.1
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 3.4e-93 347.1 659 39.5
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 2.8e-87 327.4 677 36.5
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 5.3e-86 323.2 669 37.1
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 1.3e-84 318.5 637 36.7
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 3.9e-81 307.0 167 96.4
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 7.4e-80 302.8 309 54.0
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 7.4e-80 302.8 309 54.0
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 2.2e-79 301.2 633 36.8
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 1.1e-78 298.9 635 36.4
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 3.1e-78 297.4 675 35.6
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 1.9e-75 288.1 635 36.2
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 5.5e-75 286.6 675 35.4
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 5.3e-70 270.0 676 33.7
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 2.2e-68 264.6 628 35.2
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 5.2e-65 253.4 414 41.1
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 7.7e-61 239.6 938 27.9
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 2.1e-58 231.5 819 29.1
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 2.6e-56 224.6 791 28.8
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 7.0e-54 216.5 597 31.7
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 4.7e-50 203.8 658 30.2
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 7.0e-46 189.9 373 34.3
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 1.0e-44 186.0 681 33.8
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 2.5e-43 181.4 595 28.6
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 4.1e-38 164.1 476 32.4
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 3.3e-35 154.5 309 40.1
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 2.1e-34 151.8 352 35.5
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 4.6e-29 134.0 253 37.2
RcHm_v2.0_Chr1g0382641 Rosa chinensis HOM05D003640 ORTHO05D004439 4.6e-29 134.0 128 59.4
BraA03t10789Z Brassica rapa HOM05D003640 ORTHO05D004439 6.0e-29 133.7 175 47.4
A03p14940 Brassica napus HOM05D003640 ORTHO05D004439 1.3e-28 132.5 175 47.4
CDE04G2700 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 3.0e-28 131.3 129 56.6
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea HOM05D003640 ORTHO05D004439 4.7e-26 124.0 401 29.4
HanXRQChr03g0061701 Helianthus annuus HOM05D003640 ORTHO05D004439 2.4e-22 111.7 174 40.2
Potri.016G069900 Populus trichocarpa HOM05D003640 ORTHO05D034990 3.9e-20 104.4 83 66.3
HanXRQChr06g0170111 Helianthus annuus HOM05D003640 ORTHO05D004439 7.6e-16 90.1 118 42.4
HanXRQChr15g0479781 Helianthus annuus HOM05D003640 ORTHO05D004439 9.9e-16 89.7 118 42.4
BolC9t57241H Brassica oleracea HOM05D003640 ORTHO05D004439 1.9e-11 75.5 88 46.6
C09p43560 Brassica napus HOM05D003640 ORTHO05D004439 7.3e-11 73.6 102 45.1
BolC9t57239H Brassica oleracea HOM05D003640 ORTHO05D004439 1.6e-10 72.4 102 44.1
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 1.6e-10 72.4 45 73.3
PSO017G5262 Papaver somniferum HOM05D003640 ORTHO05D004439 1.6e-10 72.4 169 32.5
PGR042G3558 Punica granatum HOM05D000045 ORTHO05D000611 6.2e-10 70.5 134 38.8
Dinv35373 Davidia involucrata HOM05D003640 ORTHO05D004439 1.1e-09 69.7 69 56.5
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.4e-09 68.6 131 43.5
PSO170G6851 Papaver somniferum HOM05D003640 ORTHO05D004439 5.2e-09 67.4 141 33.3
HanXRQChr11g0343691 Helianthus annuus HOM05D000954 ORTHO05D016146 7.6e-08 63.5 34 79.4
HanXRQChr09g0246151 Helianthus annuus HOM05D003640 ORTHO05D016146 1.4e-06 59.3 33 75.8


User provided reference genes

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