Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3665 Papaver somniferum HOM05D007919 ORTHO05D006738 3.8e-111 404.8 201 100.0
PSO675G2167 Papaver somniferum HOM05D007919 ORTHO05D006738 1.8e-68 263.1 197 64.5
PSO170G1038 Papaver somniferum HOM05D007919 ORTHO05D006738 3.0e-68 262.3 197 64.0
PSO170G4707 Papaver somniferum HOM05D007919 ORTHO05D006738 5.2e-68 261.5 186 66.1
PSO170G2249 Papaver somniferum HOM05D007919 ORTHO05D006738 7.8e-56 221.1 181 60.2
PSO339G4317 Papaver somniferum HOM05D007919 ORTHO05D006738 3.3e-54 215.7 194 54.6
PSO017G1384 Papaver somniferum HOM05D007919 ORTHO05D006738 2.3e-52 209.5 191 52.4
PSO339G5584 Papaver somniferum HOM05D007919 ORTHO05D006738 3.5e-48 195.7 162 58.0
PSO782G3402 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-47 193.4 196 49.5
PSO210G2509 Papaver somniferum HOM05D007919 ORTHO05D006738 2.1e-45 186.4 194 49.0
PSO461G0002 Papaver somniferum HOM05D007919 ORTHO05D006738 2.3e-44 183.0 197 45.7
PSO210G3055 Papaver somniferum HOM05D007919 ORTHO05D006738 5.2e-44 181.8 169 53.8
PSO017G4699 Papaver somniferum HOM05D007919 ORTHO05D006738 1.5e-43 180.3 197 43.7
PSO210G4929 Papaver somniferum HOM05D007919 ORTHO05D006738 1.5e-43 180.3 123 69.9
PSO675G7368 Papaver somniferum HOM05D007919 ORTHO05D006738 7.5e-43 177.9 192 44.8
PSO161G0093 Papaver somniferum HOM05D007919 ORTHO05D006738 3.9e-39 165.6 169 50.3
PSO210G2580 Papaver somniferum HOM05D007919 ORTHO05D006738 8.6e-39 164.5 133 56.4
PSO339G5920 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-37 160.6 174 44.3
PSO478G2225 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-35 154.1 175 42.3
PSO541G3792 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-34 150.6 197 42.1
PSO170G5626 Papaver somniferum HOM05D007919 ORTHO05D006738 1.4e-33 147.1 133 54.1
PSO339G6096 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-32 144.1 174 43.7
PSO724G1229 Papaver somniferum HOM05D007919 ORTHO05D006738 1.1e-28 131.0 145 42.1
PSO210G3676 Papaver somniferum HOM05D000003 ORTHO05D006738 2.2e-26 123.2 111 54.1
PSO384G0027 Papaver somniferum HOM05D007919 ORTHO05D006738 4.6e-24 115.5 104 52.9
PSO675G0578 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-23 113.6 128 45.3
PSO832G0011 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-23 113.6 96 52.1
PSO478G0556 Papaver somniferum HOM05D007919 ORTHO05D006738 5.1e-23 112.1 124 43.5
PSO017G1601 Papaver somniferum HOM05D007919 ORTHO05D006738 1.4e-20 104.0 102 49.0
PSO339G2937 Papaver somniferum HOM05D007919 ORTHO05D006738 6.9e-20 101.7 88 52.3
PSO339G0361 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-19 100.9 198 33.3
PSO210G4402 Papaver somniferum HOM05D007919 ORTHO05D006738 9.9e-19 97.8 148 37.2
PSO832G2737 Papaver somniferum HOM05D007919 ORTHO05D006738 2.9e-18 96.3 200 29.5
PSO339G2402 Papaver somniferum HOM05D007919 ORTHO05D006738 4.9e-18 95.5 77 57.1
PSO478G1611 Papaver somniferum HOM05D007919 ORTHO05D006738 8.4e-18 94.7 128 40.6
PSO384G1061 Papaver somniferum HOM05D007919 ORTHO05D006738 9.3e-17 91.3 195 30.3
PSO210G7492 Papaver somniferum HOM05D007919 ORTHO05D006738 2.1e-16 90.1 194 30.9
PSO528G0097 Papaver somniferum HOM05D007919 ORTHO05D006738 2.1e-16 90.1 186 28.0
PSO832G2095 Papaver somniferum HOM05D007919 ORTHO05D006738 7.8e-16 88.2 88 47.7
PSO675G5235 Papaver somniferum HOM05D029977 ORTHO05D006738 2.3e-15 86.7 172 32.6
PSO541G4554 Papaver somniferum HOM05D007919 ORTHO05D006738 5.1e-15 85.5 158 34.2
PSO832G1772 Papaver somniferum HOM05D007919 ORTHO05D006738 8.7e-15 84.7 146 32.2
RcHm_v2.0_Chr1g0356971 Rosa chinensis HOM05D000003 ORTHO05D000022 2.1e-13 80.1 143 36.4
PSO478G3405 Papaver somniferum HOM05D007919 ORTHO05D006738 2.8e-13 79.7 181 30.4
PSO541G0088 Papaver somniferum HOM05D029977 ORTHO05D006738 6.2e-13 78.6 159 30.8
PSO782G4427 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-12 77.4 174 25.9
PSO339G5774 Papaver somniferum HOM05D007919 ORTHO05D006738 2.4e-12 76.6 186 29.0
PSO478G1834 Papaver somniferum HOM05D008740 ORTHO05D006738 5.3e-12 75.5 170 29.4
PSO478G4658 Papaver somniferum HOM05D007919 ORTHO05D006738 5.3e-12 75.5 188 28.7
PSO761G0259 Papaver somniferum HOM05D008740 ORTHO05D006738 6.9e-12 75.1 148 32.4
FvH4_2g04612 Fragaria vesca HOM05D008133 ORTHO05D009449 1.5e-11 73.9 158 28.5
PSO541G4887 Papaver somniferum HOM05D007919 ORTHO05D006738 2.0e-11 73.6 194 27.8
PSO017G6133 Papaver somniferum HOM05D007919 ORTHO05D006738 2.6e-11 73.2 190 28.4
PSO675G2249 Papaver somniferum HOM05D007919 ORTHO05D006738 4.5e-11 72.4 156 30.8
PSO675G4995 Papaver somniferum HOM05D007919 ORTHO05D006738 5.8e-11 72.0 186 28.0
PSO782G4810 Papaver somniferum HOM05D007919 ORTHO05D006738 7.6e-11 71.6 179 27.4
PSO170G1593 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-10 70.5 184 27.2
PSO357G0702 Papaver somniferum HOM05D008740 ORTHO05D006738 1.7e-10 70.5 148 31.8
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 2.2e-10 70.1 163 26.4
PSO675G5251 Papaver somniferum HOM05D008740 ORTHO05D006738 2.2e-10 70.1 111 33.3
PSO017G0823 Papaver somniferum HOM05D003407 ORTHO05D001026 3.8e-10 69.3 150 29.3
PSO210G1893 Papaver somniferum HOM05D007919 ORTHO05D006738 3.8e-10 69.3 182 26.9
Aqoxy1G02620 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.9e-10 68.9 157 33.1
PSO210G1914 Papaver somniferum HOM05D003407 ORTHO05D001026 4.9e-10 68.9 162 25.9
Aqoxy2G00807 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 6.4e-10 68.6 157 33.1
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 6.4e-10 68.6 180 26.7
PSO063G1305 Papaver somniferum HOM05D003407 ORTHO05D001026 8.4e-10 68.2 163 27.6
PSO675G5848 Papaver somniferum HOM05D003407 ORTHO05D001026 1.1e-09 67.8 154 26.6
PSO724G0332 Papaver somniferum HOM05D008740 ORTHO05D006738 1.9e-09 67.0 162 28.4
PSO832G3082 Papaver somniferum HOM05D007919 ORTHO05D006738 1.9e-09 67.0 148 28.4
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 3.2e-09 66.2 134 37.3
FvH4_6g16961 Fragaria vesca HOM05D000003 ORTHO05D000022 4.2e-09 65.9 152 28.3
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 4.2e-09 65.9 160 30.6
SEGI_21104 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 5.4e-09 65.5 138 34.8
Aqoxy1G03074 Aquilegia oxysepala HOM05D000068 ORTHO05D008897 9.3e-09 64.7 159 31.4
PSO063G0028 Papaver somniferum HOM05D007919 ORTHO05D006738 9.3e-09 64.7 141 29.1
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.3e-09 64.7 195 27.2
Prupe.2G216600 Prunus persica HOM05D008133 ORTHO05D009449 1.2e-08 64.3 177 25.4
FvH4_4g25931 Fragaria vesca HOM05D011624 ORTHO05D014221 1.6e-08 63.9 115 27.8
PSO017G3839 Papaver somniferum HOM05D007919 ORTHO05D006738 1.6e-08 63.9 188 25.0
PSO732G0569 Papaver somniferum HOM05D008740 ORTHO05D006738 1.6e-08 63.9 115 29.6
PSO063G2448 Papaver somniferum HOM05D007919 ORTHO05D006738 2.1e-08 63.5 146 30.8
PSO732G0669 Papaver somniferum HOM05D008740 ORTHO05D006738 2.1e-08 63.5 115 29.6
Haze_03983 Corylus avellana HOM05D009031 ORTHO05D000167 2.7e-08 63.2 162 29.6
Gorai.009G352100 Gossypium raimondii HOM05D008766 ORTHO05D010886 3.5e-08 62.8 142 33.1
PSO063G1165 Papaver somniferum HOM05D008740 ORTHO05D006738 3.5e-08 62.8 156 28.8
PSO210G1365 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-08 62.8 125 32.0
FvH4_3g24291 Fragaria vesca HOM05D008133 ORTHO05D009449 4.6e-08 62.4 135 26.7
RcHm_v2.0_Chr4g0404581 Rosa chinensis HOM05D000003 ORTHO05D000022 4.6e-08 62.4 139 31.7
Duzib147G1660 Durio zibethinus HOM05D000003 ORTHO05D000167 6.0e-08 62.0 141 29.1
FvH4_3g22731 Fragaria vesca HOM05D000005 ORTHO05D000294 6.0e-08 62.0 168 29.8
PSO478G1651 Papaver somniferum HOM05D007919 ORTHO05D006738 6.0e-08 62.0 152 29.6
CANSAT25G0840 Cannabis sativa HOM05D000003 ORTHO05D009135 7.9e-08 61.6 134 30.6
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 1.0e-07 61.2 159 31.4
PSO081G0063 Papaver somniferum HOM05D003407 ORTHO05D001026 1.0e-07 61.2 137 30.7
EL10Ac8g20356 Beta vulgaris HOM05D004408 ORTHO05D000006 1.3e-07 60.8 165 30.9
AUR62033796 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.3e-07 60.8 128 32.0
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 1.8e-07 60.5 145 31.7
MD13G1019000 Malus domestica HOM05D000155 ORTHO05D000022 1.8e-07 60.5 159 32.1
Atru.chr2.2552 Acer truncatum HOM05D005989 ORTHO05D000022 2.3e-07 60.1 150 29.3
CANSAT01G0111 Cannabis sativa HOM05D000003 ORTHO05D009135 2.3e-07 60.1 141 28.4
CANSAT80G0055 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-07 60.1 134 32.1
PSO210G4902 Papaver somniferum HOM05D003407 ORTHO05D001026 2.3e-07 60.1 155 25.2
PSO210G5051 Papaver somniferum HOM05D000003 ORTHO05D001026 2.3e-07 60.1 140 27.1
TWI38G0639 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 3.0e-07 59.7 165 29.1
CANSAT54G1284 Cannabis sativa HOM05D000003 ORTHO05D009135 3.9e-07 59.3 130 30.0
MD02G1050700 Malus domestica HOM05D000155 ORTHO05D000022 3.9e-07 59.3 159 30.8
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-07 59.3 140 26.4
CANSAT11G2108 Cannabis sativa HOM05D000003 ORTHO05D009135 5.1e-07 58.9 136 32.4
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 5.1e-07 58.9 159 27.0
CANSAT54G0730 Cannabis sativa HOM05D000003 ORTHO05D009135 6.7e-07 58.5 139 33.8
CANSAT80G2469 Cannabis sativa HOM05D000003 ORTHO05D009135 6.7e-07 58.5 134 29.9
Lj3g0008362 Lotus japonicus HOM05D000003 ORTHO05D000004 6.7e-07 58.5 188 26.1
PSO210G7233 Papaver somniferum HOM05D007919 ORTHO05D006738 6.7e-07 58.5 159 24.5
QL12p001891 Quercus lobata HOM05D000003 ORTHO05D000167 6.7e-07 58.5 158 27.2
Aqoxy6G02062 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 8.7e-07 58.2 147 27.9
CANSAT56G3372 Cannabis sativa HOM05D000003 ORTHO05D009135 8.7e-07 58.2 134 32.1
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 8.7e-07 58.2 163 27.6
FvH4_5g26254 Fragaria vesca HOM05D011824 ORTHO05D009449 8.7e-07 58.2 156 25.6
CANSAT54G1958 Cannabis sativa HOM05D000003 ORTHO05D009135 1.1e-06 57.8 151 29.8
PSO017G1699 Papaver somniferum HOM05D000003 ORTHO05D001026 1.1e-06 57.8 159 27.0
PSO782G1037 Papaver somniferum HOM05D000017 ORTHO05D000013 1.1e-06 57.8 115 30.4
CANSAT11G2638 Cannabis sativa HOM05D000003 ORTHO05D009135 1.5e-06 57.4 151 31.1
CANSAT56G3239 Cannabis sativa HOM05D000003 ORTHO05D009135 1.5e-06 57.4 135 30.4
CANSAT56G3921 Cannabis sativa HOM05D000003 ORTHO05D009135 1.5e-06 57.4 131 33.6
CANSAT64G0259 Cannabis sativa HOM05D000003 ORTHO05D009135 1.5e-06 57.4 145 31.7
FvH4_6g11620 Fragaria vesca HOM05D008133 ORTHO05D009449 1.5e-06 57.4 156 23.7
SEGI_39148 Sequoiadendron giganteum HOM05D000352 ORTHO05D000260 1.5e-06 57.4 158 29.7
CANSAT54G1882 Cannabis sativa HOM05D000003 ORTHO05D009135 1.9e-06 57.0 136 32.4
PSO339G4411 Papaver somniferum HOM05D003407 ORTHO05D001026 1.9e-06 57.0 138 28.3
PSO832G3172 Papaver somniferum HOM05D003407 ORTHO05D001026 1.9e-06 57.0 162 26.5
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-06 57.0 130 32.3
SEGI_30262 Sequoiadendron giganteum HOM05D000399 ORTHO05D000022 1.9e-06 57.0 144 29.2
TAR628G0770 Trochodendron aralioides HOM05D009417 ORTHO05D011990 1.9e-06 57.0 181 26.5
Ah.12g061120 Amaranthus hybridus HOM05D000003 ORTHO05D000167 2.5e-06 56.6 159 28.3
CANSAT56G1897 Cannabis sativa HOM05D000003 ORTHO05D009135 2.5e-06 56.6 144 30.6
CANSAT80G1247 Cannabis sativa HOM05D000003 ORTHO05D009135 2.5e-06 56.6 139 33.1
Haze_13551 Corylus avellana HOM05D000003 ORTHO05D000167 2.5e-06 56.6 156 28.8
FvH4_6g16031 Fragaria vesca HOM05D000003 ORTHO05D009449 2.5e-06 56.6 103 29.1
PSO761G0093 Papaver somniferum HOM05D000003 ORTHO05D001026 2.5e-06 56.6 171 25.7
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-06 56.6 131 33.6
Hund07702 Selenicereus undatus HOM05D001688 ORTHO05D001571 2.5e-06 56.6 161 27.3
SEGI_14515 Sequoiadendron giganteum HOM05D004798 ORTHO05D005809 2.5e-06 56.6 151 29.8
Sopen10g027690 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-06 56.6 137 26.3
CANSAT35G0782 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 56.2 132 32.6
Haze_18233 Corylus avellana HOM05D009031 ORTHO05D000167 3.3e-06 56.2 117 29.9
CANSAT21G2469 Cannabis sativa HOM05D000003 ORTHO05D009135 4.3e-06 55.8 136 32.4
CANSAT80G2845 Cannabis sativa HOM05D000003 ORTHO05D009135 4.3e-06 55.8 127 31.5
PSO063G7282 Papaver somniferum HOM05D000003 ORTHO05D001026 4.3e-06 55.8 133 29.3
SEGI_40390 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 4.3e-06 55.8 161 28.0
CANSAT11G1930 Cannabis sativa HOM05D000003 ORTHO05D009135 5.6e-06 55.5 130 30.8
SEGI_15436 Sequoiadendron giganteum HOM05D001690 ORTHO05D013089 5.6e-06 55.5 149 25.5
SEGI_20826 Sequoiadendron giganteum HOM05D000208 ORTHO05D000022 5.6e-06 55.5 144 29.9
CANSAT78G2330 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-06 55.1 132 32.6
Haze_05910 Corylus avellana HOM05D012052 ORTHO05D013566 7.4e-06 55.1 100 34.0
QL04p023221 Quercus lobata HOM05D015023 ORTHO05D014255 7.4e-06 55.1 108 29.6
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.4e-06 55.1 161 28.0
CANSAT80G1739 Cannabis sativa HOM05D000003 ORTHO05D009135 9.6e-06 54.7 130 30.8
Cfa000480 Carpinus fangiana HOM05D000003 ORTHO05D000167 9.6e-06 54.7 136 34.6
Lj9P307T25 Lonicera japonica HOM05D000003 ORTHO05D000167 9.6e-06 54.7 140 27.9
PSO210G6702 Papaver somniferum HOM05D007979 ORTHO05D008897 9.6e-06 54.7 144 28.5
PSO384G0532 Papaver somniferum HOM05D000003 ORTHO05D001026 9.6e-06 54.7 115 27.0
RcHm_v2.0_Chr4g0422501 Rosa chinensis HOM05D000003 ORTHO05D000022 9.6e-06 54.7 147 29.9
SEGI_02397 Sequoiadendron giganteum HOM05D007626 ORTHO05D009633 9.6e-06 54.7 132 29.5


User provided reference genes

Program Settings