Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 9.3e-181 636.7 317 100.0
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 6.2e-124 448.0 307 72.6
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.0e-123 447.2 312 73.1
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 1.9e-120 436.4 314 70.7
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 2.3e-118 429.5 311 70.1
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.5e-117 426.8 286 75.9
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 7.3e-117 424.5 312 70.2
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 2.8e-116 422.5 311 69.8
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 8.1e-116 421.0 310 68.1
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 1.1e-115 420.6 310 69.7
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 8.9e-115 417.5 312 67.0
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 2.6e-114 416.0 309 67.3
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 2.6e-114 416.0 314 69.1
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 2.2e-113 412.9 312 68.3
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 2.9e-113 412.5 315 65.7
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 3.7e-113 412.1 308 68.8
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 4.9e-113 411.8 319 66.5
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 8.3e-113 411.0 313 66.8
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 2.4e-112 409.5 308 68.2
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 3.2e-112 409.1 311 68.2
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 3.2e-112 409.1 319 65.2
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 9.2e-112 407.5 315 64.8
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 1.2e-111 407.1 315 66.7
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 3.0e-110 402.5 313 66.8
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 3.9e-110 402.1 315 67.0
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 3.9e-110 402.1 315 67.0
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 1.1e-109 400.6 271 74.2
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 7.3e-109 397.9 300 68.3
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 1.6e-108 396.7 309 66.0
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 6.2e-108 394.8 309 68.6
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 6.2e-108 394.8 300 67.3
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 3.1e-107 392.5 307 65.8
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 5.2e-107 391.7 299 67.9
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 8.9e-107 391.0 309 64.1
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 1.2e-106 390.6 309 64.1
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 1.2e-106 390.6 306 66.3
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 1.5e-106 390.2 291 69.1
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 1.5e-106 390.2 304 66.4
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 7.6e-106 387.9 314 64.3
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 1.3e-105 387.1 324 63.6
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 1.3e-105 387.1 312 65.4
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 1.7e-105 386.7 311 66.2
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 6.4e-105 384.8 309 64.1
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 8.4e-105 384.4 311 65.6
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 1.4e-104 383.6 271 73.1
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.9e-104 383.3 312 63.8
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 2.4e-104 382.9 287 66.6
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 4.1e-104 382.1 268 70.9
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 2.7e-103 379.4 267 71.5
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 3.5e-103 379.0 328 62.2
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 4.6e-103 378.6 309 63.1
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 2.3e-102 376.3 319 60.5
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.3e-102 376.3 303 64.4
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 5.1e-102 375.2 267 69.7
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.1e-102 375.2 303 64.7
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 6.6e-102 374.8 312 63.5
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 8.6e-102 374.4 267 69.7
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 1.9e-101 373.2 306 63.1
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 2.5e-101 372.9 267 67.8
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 4.3e-101 372.1 315 61.0
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 7.3e-101 371.3 342 59.1
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 9.6e-101 370.9 307 61.6
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 2.8e-100 369.4 307 60.9
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 3.6e-100 369.0 301 63.1
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 3.6e-100 369.0 289 67.8
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 1.4e-99 367.1 318 59.4
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 1.4e-99 367.1 308 63.6
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 2.4e-99 366.3 260 71.9
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.4e-99 366.3 300 64.7
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 2.4e-99 366.3 319 59.9
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 3.1e-99 365.9 255 71.4
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 4.0e-99 365.5 267 68.9
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 5.2e-99 365.2 302 62.3
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 8.9e-99 364.4 307 60.6
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 1.5e-98 363.6 304 61.5
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 5.8e-98 361.7 292 64.0
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 1.7e-97 360.1 278 66.2
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 4.9e-97 358.6 330 57.9
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 1.4e-96 357.1 306 60.8
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 1.9e-96 356.7 298 61.4
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 1.9e-96 356.7 270 68.9
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 1.9e-96 356.7 312 60.3
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 2.4e-96 356.3 304 60.5
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 3.0e-94 349.4 319 59.6
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 5.1e-94 348.6 313 58.8
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 3.3e-93 345.9 317 59.6
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 9.6e-93 344.4 293 61.4
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 9.6e-93 344.4 298 60.7
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 1.3e-92 344.0 289 61.6
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 1.3e-92 344.0 257 68.9
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 1.3e-92 344.0 264 63.6
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 2.4e-88 329.7 315 55.6
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 5.4e-88 328.6 316 55.7
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 2.7e-87 326.2 300 57.0
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 1.2e-82 310.8 321 54.2
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 2.2e-81 306.6 373 49.9
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 1.6e-79 300.4 247 61.5
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 3.9e-78 295.8 267 55.8
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 3.9e-78 295.8 353 49.6
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 1.1e-75 287.7 252 60.3
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 1.8e-75 287.0 238 60.9
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 7.6e-74 281.6 192 71.4
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 1.2e-71 274.2 243 60.1
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.0e-65 254.6 214 64.5
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 9.3e-64 248.1 265 49.1
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 2.1e-63 246.9 281 48.0
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 2.7e-63 246.5 176 71.0
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.8e-62 243.8 167 73.7
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 2.5e-61 240.0 306 45.1
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 1.3e-60 237.7 166 71.7
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 7.9e-55 218.4 275 41.5
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.3e-51 205.7 150 70.0
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 1.2e-50 204.5 162 64.8
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 5.0e-49 199.1 174 61.5
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.6e-34 151.0 166 53.6
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 1.5e-32 144.4 149 51.7
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 3.2e-32 143.3 115 63.5
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 9.4e-32 141.7 280 33.9
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.5e-29 134.4 167 49.1
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 5.7e-29 132.5 110 61.8
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 1.6e-26 124.4 85 70.6
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 2.7e-26 123.6 168 44.6
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.1e-24 118.2 85 67.1
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 3.2e-24 116.7 208 35.1
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 2.8e-23 113.6 79 72.2
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 1.4e-22 111.3 296 32.1
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.0e-22 110.2 112 55.4
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 5.7e-21 105.9 73 69.9
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 2.2e-20 104.0 72 69.4
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 2.5e-08 63.9 95 41.1


User provided reference genes

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