Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 6.8e-273 943.3 463 100.0
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 3.0e-268 927.9 463 98.5
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 1.3e-183 646.7 428 72.2
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 2.9e-183 645.6 427 70.0
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 2.9e-183 645.6 440 70.0
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 3.8e-183 645.2 417 72.7
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.1e-182 643.7 428 70.3
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.4e-180 636.7 430 67.9
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 2.0e-179 632.9 425 71.3
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 4.4e-179 631.7 445 66.7
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.4e-177 626.7 424 69.6
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 1.8e-177 626.3 436 67.9
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 4.1e-177 625.2 435 67.1
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 9.2e-177 624.0 447 66.2
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.6e-176 623.2 434 68.4
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.6e-176 623.2 442 67.9
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 7.7e-176 620.9 434 67.1
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 7.7e-176 620.9 444 67.3
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 1.7e-175 619.8 445 66.1
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 3.3e-174 615.5 447 65.8
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 3.3e-174 615.5 425 67.8
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 7.3e-174 614.4 433 66.1
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 2.1e-173 612.8 425 67.5
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 1.4e-172 610.1 460 63.9
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 8.9e-172 607.4 448 65.2
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 2.0e-171 606.3 451 63.2
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 4.4e-171 605.1 422 68.0
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 7.5e-171 604.4 455 64.0
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 7.5e-171 604.4 448 64.1
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 7.5e-171 604.4 433 66.5
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 9.8e-171 604.0 448 64.1
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 9.8e-171 604.0 453 63.8
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 2.2e-170 602.8 415 68.2
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 3.7e-170 602.1 393 69.7
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.8e-169 599.7 400 69.8
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.4e-169 599.4 425 65.9
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 4.1e-169 598.6 432 65.7
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.4e-169 598.2 400 69.5
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 9.2e-169 597.4 463 62.9
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 1.6e-168 596.7 454 62.8
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 1.6e-168 596.7 450 63.8
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 2.0e-168 596.3 455 62.6
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 7.8e-168 594.3 442 62.9
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 7.8e-168 594.3 448 62.3
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 1.0e-167 594.0 423 65.7
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 2.3e-167 592.8 422 65.9
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 5.0e-167 591.7 455 62.6
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.6e-167 591.3 425 66.1
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 1.1e-166 590.5 418 65.3
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.5e-166 590.1 426 66.9
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 9.5e-166 587.4 424 64.9
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 1.2e-165 587.0 430 64.0
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 4.7e-165 585.1 432 64.1
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 6.2e-165 584.7 432 63.2
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 1.4e-164 583.6 484 59.3
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 3.1e-164 582.4 429 65.7
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 2.0e-163 579.7 423 64.1
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 2.6e-163 579.3 435 62.5
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 5.8e-163 578.2 418 65.6
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 2.4e-161 572.8 408 66.7
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 5.0e-159 565.1 374 69.8
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 8.6e-159 564.3 429 63.6
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 2.1e-157 559.7 460 59.6
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 3.6e-157 558.9 443 59.4
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 4.7e-157 558.5 460 60.0
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 4.0e-156 555.4 429 61.3
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 5.2e-156 555.1 452 59.1
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.0e-155 553.1 428 63.6
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 2.5e-150 536.2 398 62.1
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 3.3e-150 535.8 398 61.8
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.6e-149 533.5 427 61.1
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 6.2e-149 531.6 400 62.5
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.1e-148 530.8 455 58.9
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.2e-147 527.3 425 60.2
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.0e-147 526.6 425 60.9
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 3.9e-143 512.3 332 70.2
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 2.5e-142 509.6 417 56.4
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 6.2e-141 505.0 436 60.6
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 5.2e-140 501.9 356 68.5
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 7.6e-139 498.0 399 57.4
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 4.6e-136 488.8 241 98.8
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 6.0e-136 488.4 447 52.3
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 1.3e-135 487.3 425 58.4
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 5.1e-135 485.3 414 57.5
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.9e-134 483.4 397 61.0
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 1.9e-134 483.4 332 69.9
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-133 480.7 415 58.6
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 2.4e-132 476.5 449 53.7
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 2.9e-130 469.5 334 66.8
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-127 460.7 416 57.2
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 5.3e-124 448.7 338 63.9
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 6.9e-124 448.4 343 63.3
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.9e-122 443.0 338 63.0
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.1e-112 410.2 422 48.1
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.9e-105 387.1 226 77.0
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 2.1e-80 303.9 240 62.9
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 3.2e-73 280.0 198 65.7
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 2.0e-67 260.8 239 56.5
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 2.8e-56 223.8 382 32.5
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-51 208.4 130 78.5
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-51 208.4 130 78.5
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 3.6e-48 196.8 164 56.7
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 7.0e-44 182.6 386 32.6
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 3.7e-37 160.2 161 50.3
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 2.5e-33 147.5 134 51.5
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.9e-31 139.0 140 52.9
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.9e-31 139.0 140 52.9
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 7.1e-28 129.4 70 84.3
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 4.3e-25 120.2 120 51.7
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 1.4e-20 105.1 63 74.6
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 1.2e-19 102.1 76 61.8
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 2.6e-14 84.3 212 27.8
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 3.4e-14 84.0 204 28.9
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 4.5e-14 83.6 221 28.5
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 1.0e-10 72.4 537 18.8
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 8.7e-10 69.3 75 44.0
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.2e-06 58.9 77 39.0


User provided reference genes

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