Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 1.2e-208 729.9 454 100.0
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 7.4e-171 604.4 457 86.0
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 2.7e-56 223.8 410 44.4
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 9.9e-51 205.3 409 37.7
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 1.1e-49 201.8 412 38.6
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 2.7e-48 197.2 416 37.7
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 1.8e-47 194.5 410 38.0
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 1.8e-47 194.5 426 38.3
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 8.2e-45 185.7 426 41.1
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 4.0e-44 183.3 421 36.6
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 5.3e-44 183.0 420 35.2
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 3.4e-43 180.3 408 36.0
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 4.5e-43 179.9 453 31.3
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 1.3e-42 178.3 434 35.3
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 2.9e-42 177.2 412 40.3
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 1.6e-40 171.4 448 33.7
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 3.5e-40 170.2 477 35.8
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 4.6e-40 169.9 407 35.1
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 1.3e-39 168.3 430 41.4
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 1.3e-39 168.3 472 36.7
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 6.7e-39 166.0 405 34.6
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 1.5e-38 164.9 425 38.8
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 4.3e-38 163.3 422 38.4
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 4.3e-38 163.3 435 35.9
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 9.7e-38 162.2 445 31.0
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 2.2e-37 161.0 416 41.1
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 2.2e-37 161.0 416 41.1
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 1.1e-36 158.7 431 38.3
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 1.8e-36 157.9 408 34.8
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 2.4e-36 157.5 418 38.0
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 3.1e-36 157.1 426 33.3
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 6.9e-36 156.0 417 36.5
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 3.4e-35 153.7 460 33.7
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 4.5e-35 153.3 445 31.5
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 5.9e-35 152.9 446 31.8
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 1.1e-33 148.7 427 39.6
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 1.4e-33 148.3 416 37.0
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 4.2e-33 146.7 454 35.9
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 7.2e-33 146.0 429 37.5
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 7.2e-33 146.0 429 37.5
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 3.6e-32 143.7 401 30.9
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 6.1e-32 142.9 429 37.3
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.0e-31 142.1 403 38.5
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 1.8e-31 141.4 436 39.4
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 5.1e-31 139.8 406 32.5
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 8.8e-31 139.0 368 32.1
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 8.8e-31 139.0 408 35.3
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 1.5e-30 138.3 416 32.7
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 2.5e-30 137.5 402 33.8
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 5.7e-30 136.3 424 36.1
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.3e-29 135.2 429 34.0
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 2.8e-29 134.0 421 35.2
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 2.8e-29 134.0 413 38.5
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 2.8e-29 134.0 151 52.3
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 2.8e-29 134.0 411 36.0
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 4.8e-29 133.3 402 34.8
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 4.8e-29 133.3 415 38.1
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 6.3e-29 132.9 414 33.6
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 1.1e-28 132.1 433 29.1
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 3.1e-28 130.6 422 31.3
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 5.3e-28 129.8 453 28.0
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 1.2e-27 128.6 407 36.9
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 1.2e-27 128.6 151 57.6
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 2.0e-27 127.9 135 50.4
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 2.6e-27 127.5 447 28.2
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 2.6e-27 127.5 447 28.2
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 3.4e-27 127.1 145 72.4
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 4.5e-27 126.7 174 45.4
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 7.7e-27 125.9 144 47.2
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 7.7e-27 125.9 137 72.3
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 1.0e-26 125.6 189 42.9
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.7e-26 124.8 124 80.6
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.9e-26 124.0 148 63.5
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 3.8e-26 123.6 414 35.3
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 3.8e-26 123.6 564 30.5
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 5.0e-26 123.2 391 31.7
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 6.5e-26 122.9 135 52.6
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 1.1e-25 122.1 416 37.0
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 1.1e-25 122.1 143 52.4
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 1.4e-25 121.7 406 35.5
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 1.4e-25 121.7 402 30.1
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 1.9e-25 121.3 136 70.6
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 3.2e-25 120.6 436 29.1
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 3.2e-25 120.6 502 32.9
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 7.2e-25 119.4 155 58.7
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 7.2e-25 119.4 135 54.8
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.2e-24 118.6 362 32.6
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 1.2e-24 118.6 210 51.9
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 1.6e-24 118.2 390 41.5
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 1.6e-24 118.2 416 39.7
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 3.6e-24 117.1 420 31.7
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 6.1e-24 116.3 147 48.3
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 7.9e-24 115.9 137 51.8
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.4e-23 115.2 413 32.0
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 8.8e-23 112.5 561 30.3
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 8.8e-23 112.5 130 46.2
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 1.5e-22 111.7 459 34.9
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 2.6e-22 110.9 557 29.6
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 4.4e-22 110.2 557 30.0
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 4.4e-22 110.2 149 48.3
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 7.4e-22 109.4 557 29.8
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 1.3e-21 108.6 516 27.3
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.7e-21 108.2 411 35.3
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 2.8e-21 107.5 358 31.8
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 8.2e-21 105.9 136 69.1
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.8e-20 104.8 149 52.3
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 1.8e-20 104.8 328 29.9
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 5.9e-19 99.8 176 44.9
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.2e-18 97.8 126 42.9
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.9e-18 97.4 187 35.3
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 2.9e-18 97.4 426 30.5
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 6.5e-18 96.3 449 33.9
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 2.5e-17 94.4 166 39.8
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 3.2e-17 94.0 145 49.0
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 7.2e-17 92.8 138 41.3
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 9.4e-17 92.4 166 44.0
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.7e-16 90.9 413 29.1
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 6.1e-16 89.7 171 41.5
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 3.0e-15 87.4 446 25.1
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 3.9e-15 87.0 409 26.9
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 2.6e-14 84.3 48 79.2
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 5.7e-14 83.2 129 39.5
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 8.2e-13 79.3 301 28.2
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 3.5e-11 73.9 320 34.7
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 1.7e-10 71.6 123 43.9
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 2.2e-10 71.2 124 38.7
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 2.9e-10 70.9 152 57.9
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 9.4e-09 65.9 410 24.9
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 1.0e-07 62.4 98 38.8
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 2.6e-06 57.8 137 43.8
CDE05G3071 Ceratophyllum demersum HOM05D000186 ORTHO05D002329 3.4e-06 57.4 194 27.3


User provided reference genes

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