Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 1.3e-82 309.7 159 100.0
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 6.1e-80 300.8 159 96.9
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 5.7e-54 214.5 160 68.1
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 3.7e-53 211.8 159 66.7
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.8e-52 209.5 156 67.3
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 1.2e-51 206.8 159 66.0
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 2.7e-51 205.7 150 71.3
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 5.9e-51 204.5 150 67.3
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.3e-50 203.4 159 64.8
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 2.3e-50 202.6 155 65.8
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 6.6e-50 201.1 155 63.9
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.1e-49 200.3 160 65.0
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.1e-49 200.3 161 65.2
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 1.5e-49 199.9 158 64.6
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.5e-49 199.9 157 63.7
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 9.5e-49 197.2 155 64.5
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 1.6e-48 196.4 159 62.9
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 2.8e-48 195.7 149 65.8
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 3.6e-48 195.3 159 59.7
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 6.2e-48 194.5 157 61.1
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 6.2e-48 194.5 159 62.9
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 1.0e-47 193.7 153 63.4
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 1.0e-47 193.7 153 62.7
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 1.8e-47 193.0 159 59.1
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 2.3e-47 192.6 155 63.2
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 4.0e-47 191.8 147 65.3
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 6.8e-47 191.0 159 63.5
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 6.8e-47 191.0 159 61.0
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 8.9e-47 190.7 157 60.5
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 8.9e-47 190.7 159 62.9
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 8.9e-47 190.7 150 62.0
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 1.2e-46 190.3 155 61.3
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 1.2e-46 190.3 150 62.7
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 1.2e-46 190.3 152 61.8
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 2.6e-46 189.1 155 62.6
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 3.4e-46 188.7 144 65.3
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 4.4e-46 188.3 155 60.6
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 5.8e-46 188.0 159 57.9
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 7.5e-46 187.6 159 62.3
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 1.3e-45 186.8 151 62.3
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 2.2e-45 186.0 158 59.5
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 3.7e-45 185.3 146 63.0
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 3.7e-45 185.3 169 59.2
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 8.3e-45 184.1 152 61.8
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.1e-44 183.7 155 60.0
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 1.9e-44 183.0 150 62.0
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 2.4e-44 182.6 159 59.1
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 3.2e-44 182.2 135 67.4
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 4.1e-44 181.8 184 55.4
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 7.0e-44 181.0 148 62.2
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 9.2e-44 180.6 154 59.1
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 1.6e-43 179.9 155 58.1
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 2.0e-43 179.5 153 60.1
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 3.5e-43 178.7 131 68.7
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.0e-42 177.2 144 63.2
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 1.0e-42 177.2 183 54.1
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 3.9e-42 175.3 156 57.7
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 5.0e-42 174.9 127 69.3
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 6.6e-42 174.5 177 53.7
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 1.5e-41 173.3 147 57.8
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 1.9e-41 172.9 121 69.4
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 1.9e-41 172.9 144 60.4
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 3.3e-41 172.2 153 56.9
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 5.6e-41 171.4 159 55.3
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 5.6e-41 171.4 150 58.7
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 7.3e-41 171.0 159 54.7
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 7.3e-41 171.0 159 54.7
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 7.3e-41 171.0 159 54.7
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 9.5e-41 170.6 134 64.9
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 2.1e-40 169.5 147 57.1
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.8e-40 169.1 175 52.6
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 4.7e-40 168.3 148 57.4
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 1.1e-39 167.2 159 55.3
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 1.4e-39 166.8 149 55.7
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 1.4e-39 166.8 151 56.3
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 1.8e-39 166.4 159 54.7
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 1.8e-39 166.4 149 57.0
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 2.3e-39 166.0 137 64.2
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 5.2e-39 164.9 135 63.0
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 1.2e-38 163.7 146 56.2
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 2.0e-38 162.9 121 66.1
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 7.5e-38 161.0 149 54.4
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 1.3e-37 160.2 159 52.8
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 4.9e-37 158.3 152 52.0
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 1.9e-36 156.4 146 54.8
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 1.9e-36 156.4 146 54.8
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 4.1e-36 155.2 143 56.6
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 4.6e-35 151.8 118 62.7
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 4.6e-35 151.8 117 64.1
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 6.0e-35 151.4 113 65.5
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 7.3e-33 144.4 106 64.2
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 6.2e-32 141.4 124 58.9
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 3.1e-31 139.0 159 48.4
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 1.3e-29 133.7 111 61.3
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 2.9e-29 132.5 152 49.3
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.1e-28 130.6 149 43.6
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 4.1e-28 128.6 150 39.3
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 7.1e-28 127.9 160 47.5
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 3.5e-27 125.6 118 53.4
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 8.1e-24 114.4 88 63.6
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.8e-23 113.2 133 44.4
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 8.9e-23 110.9 127 41.7
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 7.6e-22 107.8 80 68.8
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 3.8e-21 105.5 130 37.7
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 3.2e-20 102.4 83 63.9
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 7.1e-20 101.3 88 60.2
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 9.3e-20 100.9 74 64.9
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 5.1e-18 95.1 70 62.9
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 8.7e-18 94.4 119 39.5
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.1e-17 94.0 80 58.8
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 4.8e-16 88.6 69 63.8
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 5.8e-14 81.6 82 52.4
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.0e-10 70.9 96 41.7
Cre03.g201500 Chlamydomonas reinhardtii HOM05D006886 ORTHO05D008494 8.7e-10 67.8 133 30.8
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.5e-09 67.0 68 55.9
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 1.1e-07 60.8 44 63.6
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.4e-07 60.5 58 56.9


User provided reference genes

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