Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3423 Papaver somniferum HOM05D003749 ORTHO05D004421 6.1e-79 297.4 145 100.0
PSO782G4209 Papaver somniferum HOM05D003749 ORTHO05D004421 5.8e-77 290.8 145 97.2
Nn3g17694 Nelumbo nucifera HOM05D003749 ORTHO05D004421 3.6e-55 218.4 140 75.7
CiPaw.03G059000 Carya illinoinensis HOM05D003749 ORTHO05D004421 8.1e-55 217.2 144 74.3
CiPaw.04G040000 Carya illinoinensis HOM05D003749 ORTHO05D004421 8.1e-55 217.2 140 75.0
Peaxi162Scf00479g00114 Petunia axillaris HOM05D003749 ORTHO05D004421 4.0e-54 214.9 140 72.9
Sed0006006 Sechium edule HOM05D003749 ORTHO05D004421 5.2e-54 214.5 142 72.5
Atru.chr2.1608 Acer truncatum HOM05D003749 ORTHO05D004421 6.8e-54 214.2 140 72.9
Atru.chr8.949 Acer truncatum HOM05D003749 ORTHO05D004421 6.8e-54 214.2 140 73.6
Cfa007953 Carpinus fangiana HOM05D003749 ORTHO05D004421 6.8e-54 214.2 142 71.1
Manes.01G107800 Manihot esculenta HOM05D003749 ORTHO05D004421 1.2e-53 213.4 140 73.6
TAR629G3198 Trochodendron aralioides HOM05D003749 ORTHO05D004421 1.5e-53 213.0 142 73.9
PGR042G1179 Punica granatum HOM05D003749 ORTHO05D004421 2.6e-53 212.2 146 69.9
CsaV3_5G039100 Cucumis sativus L. HOM05D003749 ORTHO05D004421 3.4e-53 211.8 142 71.8
Hund15121 Selenicereus undatus HOM05D003749 ORTHO05D004421 3.4e-53 211.8 146 70.5
MELO3C022086.2 Cucumis melo HOM05D003749 ORTHO05D004421 4.4e-53 211.5 142 71.8
ClCG11G005320 Citrullus lanatus HOM05D003749 ORTHO05D004421 9.9e-53 210.3 142 71.1
Nn4g23700 Nelumbo nucifera HOM05D003749 ORTHO05D004421 1.3e-52 209.9 143 71.3
QL02p052938 Quercus lobata HOM05D003749 ORTHO05D004421 1.7e-52 209.5 139 71.9
Cpa.g.sc179.30 Carica papaya HOM05D003749 ORTHO05D004421 2.9e-52 208.8 140 71.4
Manes.02G066100 Manihot esculenta HOM05D003749 ORTHO05D004421 3.8e-52 208.4 140 72.1
PGSC0003DMG400010046 Solanum tuberosum HOM05D003749 ORTHO05D004421 6.4e-52 207.6 146 68.5
Sopen02g034510 Solanum pennellii HOM05D003749 ORTHO05D004421 8.4e-52 207.2 146 68.5
TAR374G0647 Trochodendron aralioides HOM05D003749 ORTHO05D004421 8.4e-52 207.2 140 74.3
Solyc02g089820.4 Solanum lycopersicum HOM05D003749 ORTHO05D004421 1.1e-51 206.8 146 68.5
Peaxi162Scf01056g00243 Petunia axillaris HOM05D003749 ORTHO05D004421 1.9e-51 206.1 140 68.6
GSVIVG01036450001 Vitis vinifera HOM05D003749 ORTHO05D004421 4.1e-51 204.9 140 70.0
CDE01G0232 Ceratophyllum demersum HOM05D003749 ORTHO05D004421 9.2e-51 203.8 142 70.4
Nitab4.5_0009272g0030 Nicotiana tabacum HOM05D003749 ORTHO05D004421 9.2e-51 203.8 144 68.8
Actinidia18121 Actinidia chinensis HOM05D003749 ORTHO05D004421 1.6e-50 203.0 142 69.0
Hma1.2p1_0550F.1_g177200 Hydrangea macrophylla HOM05D003749 ORTHO05D004421 1.6e-50 203.0 140 70.7
Hma1.2p1_0550F.1_g177205 Hydrangea macrophylla HOM05D003749 ORTHO05D004421 1.6e-50 203.0 140 70.7
THA.LOC104823870 Tarenaya hassleriana HOM05D003749 ORTHO05D004421 2.1e-50 202.6 142 67.6
CANSAT64G0170 Cannabis sativa HOM05D003749 ORTHO05D004421 2.7e-50 202.2 140 70.0
Dinv33926 Davidia involucrata HOM05D003749 ORTHO05D004421 2.7e-50 202.2 140 70.0
CSS0022784 Camellia sinensis var. sinensis HOM05D003749 ORTHO05D004421 3.5e-50 201.8 142 69.7
CAN.G497.5 Capsicum annuum HOM05D003749 ORTHO05D004421 3.5e-50 201.8 146 65.8
CSS0014522 Camellia sinensis var. sinensis HOM05D003749 ORTHO05D004421 4.6e-50 201.4 142 69.7
arahy.Tifrunner.gnm1.ann1.G4J1DJ Arachis hypogaea HOM05D003749 ORTHO05D004421 7.8e-50 200.7 146 68.5
Lalb_Chr09g0320331 Lupinus albus HOM05D003749 ORTHO05D004421 7.8e-50 200.7 146 68.5
THA.LOC104805552 Tarenaya hassleriana HOM05D003749 ORTHO05D004421 7.8e-50 200.7 142 66.2
arahy.Tifrunner.gnm1.ann1.M5A7E6 Arachis hypogaea HOM05D003749 ORTHO05D004421 1.7e-49 199.5 144 68.8
CDE02G3838 Ceratophyllum demersum HOM05D003749 ORTHO05D004421 1.7e-49 199.5 142 69.7
LjContig00222g0005460 Lotus japonicus HOM05D003749 ORTHO05D004421 1.7e-49 199.5 146 69.2
Lalb_Chr16g0376641 Lupinus albus HOM05D003749 ORTHO05D004421 1.7e-49 199.5 146 67.8
Duzib268G0352 Durio zibethinus HOM05D003749 ORTHO05D004421 3.0e-49 198.7 144 70.1
Gorai.004G054900 Gossypium raimondii HOM05D003749 ORTHO05D004421 3.9e-49 198.4 140 70.0
Gohir.A08G044800 Gossypium hirsutum HOM05D003749 ORTHO05D004421 5.1e-49 198.0 140 70.7
Nitab4.5_0003461g0020 Nicotiana tabacum HOM05D003749 ORTHO05D004421 5.1e-49 198.0 144 66.0
Prupe.3G240300 Prunus persica HOM05D003749 ORTHO05D004421 5.1e-49 198.0 140 67.9
Duzib138G1497 Durio zibethinus HOM05D003749 ORTHO05D004421 8.7e-49 197.2 144 70.1
Thecc.04G138900 Theobroma cacao HOM05D003749 ORTHO05D004421 8.7e-49 197.2 140 70.0
Carub.0007s3721 Capsella rubella HOM05D003749 ORTHO05D004421 1.1e-48 196.8 142 66.2
EL10Ac5g11727 Beta vulgaris HOM05D003749 ORTHO05D004421 1.5e-48 196.4 146 67.1
Thhalv10027984m.g Eutrema salsugineum HOM05D003749 ORTHO05D004421 1.5e-48 196.4 142 66.2
MD17G1073500 Malus domestica HOM05D003749 ORTHO05D004421 1.5e-48 196.4 140 67.1
Aa31LG2G3620 Aethionema arabicum HOM05D003749 ORTHO05D004421 2.5e-48 195.7 142 65.5
Ca_24455_v3 Cicer arietinum L. HOM05D003749 ORTHO05D004421 2.5e-48 195.7 146 67.1
Ca_04934_v3 Cicer arietinum L. HOM05D003749 ORTHO05D004421 3.3e-48 195.3 146 67.8
BcaB03g15341 Brassica carinata HOM05D003749 ORTHO05D004421 4.3e-48 194.9 142 64.8
CARHR214090 Cardamine hirsuta HOM05D003749 ORTHO05D004421 4.3e-48 194.9 142 64.8
Gohir.D08G054500 Gossypium hirsutum HOM05D003749 ORTHO05D004421 4.3e-48 194.9 140 68.6
Phvul.011G021700 Phaseolus vulgaris HOM05D003749 ORTHO05D004421 4.3e-48 194.9 147 66.7
Rhsim10G0064100 Rhododendron simsii HOM05D003749 ORTHO05D004421 4.3e-48 194.9 158 62.0
AT5G38650 Arabidopsis thaliana HOM05D003749 ORTHO05D004421 5.6e-48 194.5 142 66.2
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 5.6e-48 194.5 145 65.5
CARHR059720 Cardamine hirsuta HOM05D003749 ORTHO05D004421 5.6e-48 194.5 142 65.5
Carub.0002s1352 Capsella rubella HOM05D003749 ORTHO05D004421 7.3e-48 194.1 142 64.1
Glyma.11G093000 Glycine max HOM05D003749 ORTHO05D004421 7.3e-48 194.1 147 66.0
MD09G1083200 Malus domestica HOM05D003749 ORTHO05D004421 7.3e-48 194.1 140 66.4
SEGI_14095 Sequoiadendron giganteum HOM05D003749 ORTHO05D004421 9.6e-48 193.7 143 63.6
BcaB05g24251 Brassica carinata HOM05D003749 ORTHO05D004421 1.2e-47 193.4 142 64.1
AUR62042069 Chenopodium quinoa HOM05D003749 ORTHO05D004421 1.2e-47 193.4 146 67.1
AUR62044332 Chenopodium quinoa HOM05D003749 ORTHO05D004421 1.2e-47 193.4 146 67.1
AUR62040335 Chenopodium quinoa HOM05D003749 ORTHO05D004421 1.6e-47 193.0 146 67.1
MBI16_g33829_MAGBIO Magnolia biondii HOM05D003749 ORTHO05D004421 1.6e-47 193.0 146 65.1
A07p33850 Brassica napus HOM05D003749 ORTHO05D004421 2.1e-47 192.6 142 65.5
BolC6t39133H Brassica oleracea HOM05D003749 ORTHO05D004421 2.1e-47 192.6 142 65.5
BraA07t31011Z Brassica rapa HOM05D003749 ORTHO05D004421 2.1e-47 192.6 142 65.5
Sp5g22180 Schrenkiella parvula HOM05D003749 ORTHO05D004421 2.1e-47 192.6 142 64.1
A07p32660 Brassica napus HOM05D003749 ORTHO05D004421 2.8e-47 192.2 142 64.1
C06p38830 Brassica napus HOM05D003749 ORTHO05D004421 2.8e-47 192.2 142 64.1
BolC6t38976H Brassica oleracea HOM05D003749 ORTHO05D004421 2.8e-47 192.2 142 64.1
BraA07t30890Z Brassica rapa HOM05D003749 ORTHO05D004421 2.8e-47 192.2 142 64.1
Glyma.12G019300 Glycine max HOM05D003749 ORTHO05D004421 2.8e-47 192.2 147 65.3
TWI38G0650 Tripterygium wilfordii HOM05D003749 ORTHO05D004421 2.8e-47 192.2 144 67.4
AT1G67250 Arabidopsis thaliana HOM05D003749 ORTHO05D004421 4.7e-47 191.4 142 62.0
BcaC03g14820 Brassica carinata HOM05D003749 ORTHO05D004421 4.7e-47 191.4 142 64.1
A02p14100 Brassica napus HOM05D003749 ORTHO05D004421 4.7e-47 191.4 142 64.1
C02p22710 Brassica napus HOM05D003749 ORTHO05D004421 4.7e-47 191.4 142 64.1
BolC2t08424H Brassica oleracea HOM05D003749 ORTHO05D004421 4.7e-47 191.4 142 64.1
Ah.02g115680 Amaranthus hybridus HOM05D003749 ORTHO05D004421 6.2e-47 191.0 144 67.4
BcaB03g15214 Brassica carinata HOM05D003749 ORTHO05D004421 6.2e-47 191.0 142 64.1
MBI10_g08551_MAGBIO Magnolia biondii HOM05D003749 ORTHO05D004421 6.2e-47 191.0 146 64.4
Sc10g0001340 Simmondsia chinensis HOM05D003749 ORTHO05D004421 8.1e-47 190.7 144 64.6
BcaC08g46151 Brassica carinata HOM05D003749 ORTHO05D004421 1.1e-46 190.3 142 64.8
C06p43020 Brassica napus HOM05D003749 ORTHO05D004421 1.1e-46 190.3 142 64.8
TWI39G0894 Tripterygium wilfordii HOM05D003749 ORTHO05D004421 1.1e-46 190.3 144 65.3
FAN14G1502 Fragaria x ananassa HOM05D003749 ORTHO05D004421 1.8e-46 189.5 138 66.7
BraA02t06473Z Brassica rapa HOM05D003749 ORTHO05D004421 2.4e-46 189.1 142 63.4
VMungo1127G1849 Vigna mungo HOM05D003749 ORTHO05D004421 2.4e-46 189.1 144 63.2
Aqoxy3G03894 Aquilegia oxysepala HOM05D003749 ORTHO05D004421 4.0e-46 188.3 147 64.6
Lj3g0004703 Lotus japonicus HOM05D003749 ORTHO05D004421 5.2e-46 188.0 146 64.4
MBI16_g46925_MAGBIO Magnolia biondii HOM05D003749 ORTHO05D004421 5.2e-46 188.0 137 67.9
TPR.G29477 Trifolium pratense HOM05D003749 ORTHO05D004421 5.2e-46 188.0 146 65.1
FAN05G0572 Fragaria x ananassa HOM05D003749 ORTHO05D004421 6.9e-46 187.6 138 66.7
Haze_14116 Corylus avellana HOM05D003749 ORTHO05D004421 1.5e-45 186.4 191 53.4
Haze_14122 Corylus avellana HOM05D003749 ORTHO05D004421 1.5e-45 186.4 191 53.4
Thhalv10019303m.g Eutrema salsugineum HOM05D003749 ORTHO05D004421 2.0e-45 186.0 142 63.4
Medtr4g077240 Medicago truncatula HOM05D003749 ORTHO05D004421 2.0e-45 186.0 146 64.4
FAN02G1560 Fragaria x ananassa HOM05D003749 ORTHO05D004421 2.6e-45 185.7 138 65.2
MSTRG.3390 Avicennia marina HOM05D003749 ORTHO05D004421 3.4e-45 185.3 141 62.4
Nitab4.5_0002108g0070 Nicotiana tabacum HOM05D003749 ORTHO05D004421 3.4e-45 185.3 170 57.1
Ciclev10013059m.g Citrus clementina HOM05D003749 ORTHO05D004421 4.4e-45 184.9 143 62.2
Lalb_Chr19g0139861 Lupinus albus HOM05D003749 ORTHO05D004421 4.4e-45 184.9 146 65.1
SalBow1G5732 Salvia bowleyana HOM05D003749 ORTHO05D004421 5.8e-45 184.5 132 64.4
SEGI_36613 Sequoiadendron giganteum HOM05D003749 ORTHO05D004421 9.9e-45 183.7 136 63.2
ATR0053G008 Amborella trichopoda HOM05D003749 ORTHO05D004421 2.9e-44 182.2 143 65.0
SalBow6G0369 Salvia bowleyana HOM05D003749 ORTHO05D004421 2.9e-44 182.2 132 63.6
HanXRQChr14g0448851 Helianthus annuus HOM05D003749 ORTHO05D004421 3.8e-44 181.8 140 62.9
Migut.K00859 Erythranthe guttata HOM05D003749 ORTHO05D004421 6.4e-44 181.0 141 61.0
FvH4_6g45420 Fragaria vesca HOM05D003749 ORTHO05D004421 6.4e-44 181.0 134 65.7
RcHm_v2.0_Chr2g0163251 Rosa chinensis HOM05D003749 ORTHO05D004421 6.4e-44 181.0 138 63.8
COL.COLO4_16198 Corchorus olitorius HOM05D003749 ORTHO05D004421 2.4e-43 179.1 142 62.7
unitig_32.g10762 Utricularia gibba HOM05D003749 ORTHO05D004421 5.4e-43 177.9 132 64.4
Lsat_1_v5_gn_2_90800 Lactuca sativa HOM05D003749 ORTHO05D004421 1.6e-42 176.4 140 62.9
Potri.017G111900 Populus trichocarpa HOM05D003749 ORTHO05D004421 1.6e-42 176.4 137 60.6
ECA238G2303 Erigeron canadensis HOM05D003749 ORTHO05D004421 2.1e-42 176.0 146 60.3
Migut.H00529 Erythranthe guttata HOM05D003749 ORTHO05D004421 2.7e-42 175.6 141 60.3
HanXRQChr12g0385611 Helianthus annuus HOM05D003749 ORTHO05D004421 2.7e-42 175.6 145 60.7
AL2G25760 Arabidopsis lyrata HOM05D003749 ORTHO05D004421 4.6e-42 174.9 189 48.1
unitig_748.g8406 Utricularia gibba HOM05D003749 ORTHO05D004421 7.8e-42 174.1 132 62.9
Potri.006G249600 Populus trichocarpa HOM05D003749 ORTHO05D004421 1.3e-41 173.3 139 58.3
Cc07_g05070 Coffea canephora HOM05D003749 ORTHO05D004421 3.0e-41 172.2 145 60.7
Psat7g171120 Pisum sativum HOM05D003749 ORTHO05D004421 1.5e-40 169.9 148 61.5
SGA_v2.0_scaffold62G21545 Striga asiatica HOM05D003749 ORTHO05D004421 1.9e-40 169.5 147 55.8
HPP92_000270 Vanilla planifolia HOM05D003749 ORTHO05D004421 4.3e-40 168.3 139 59.0
Atru.chr2.1922 Acer truncatum HOM05D003749 ORTHO05D004421 3.6e-39 165.2 115 69.6
Sp7g03260 Schrenkiella parvula HOM05D003749 ORTHO05D004421 1.8e-38 162.9 142 58.5
Nitab4.5_0004487g0040 Nicotiana tabacum HOM05D003749 ORTHO05D004421 2.4e-38 162.5 175 51.4
TWI38G0800 Tripterygium wilfordii HOM05D003749 ORTHO05D004421 2.4e-38 162.5 144 58.3
Os02g0800100 Oryza sativa ssp. japonica HOM05D003749 ORTHO05D004421 4.0e-38 161.8 141 56.0
Zm00001eb258090 Zea mays HOM05D003749 ORTHO05D004421 4.5e-37 158.3 137 55.5
Pp3c23_15440 Physcomitrium patens HOM05D003749 ORTHO05D004421 7.6e-37 157.5 137 56.2
Os03g0583700 Oryza sativa ssp. japonica HOM05D003749 ORTHO05D004421 2.9e-36 155.6 141 53.9
Pp3c20_8310 Physcomitrium patens HOM05D003749 ORTHO05D004421 2.9e-36 155.6 137 55.5
Os09g0314900 Oryza sativa ssp. japonica HOM05D003749 ORTHO05D004421 3.8e-36 155.2 141 53.9
Medtr5g008020 Medicago truncatula HOM05D003749 ORTHO05D004421 1.2e-34 150.2 146 54.8
AagrBONN_evm.TU.Sc2ySwM_344.3948 Anthoceros agrestis HOM05D003749 ORTHO05D004421 1.6e-34 149.8 143 50.3
Mapoly0073s0035 Marchantia polymorpha HOM05D003749 ORTHO05D004421 2.8e-31 139.0 138 49.3
Dinv34854 Davidia involucrata HOM05D003749 ORTHO05D004421 3.7e-31 138.7 102 64.7
CSS0049372 Camellia sinensis var. sinensis HOM05D003749 ORTHO05D004421 6.2e-31 137.9 147 51.0
vmacro05576 Vaccinium macrocarpon HOM05D003749 ORTHO05D004421 4.5e-29 131.7 286 32.5
CBR_g34012 Chara braunii HOM05D003749 ORTHO05D004421 1.1e-27 127.1 127 49.6
SMO119G0338 Selaginella moellendorffii HOM05D003749 ORTHO05D004421 1.9e-24 116.3 128 46.1
ATR0693G122 Amborella trichopoda HOM05D003749 ORTHO05D004421 8.2e-23 110.9 75 68.0
Os02g0800500 Oryza sativa ssp. japonica HOM05D003749 ORTHO05D004421 1.2e-21 107.1 105 49.5
Os02g0801200 Oryza sativa ssp. japonica HOM05D003749 ORTHO05D004421 1.2e-21 107.1 105 49.5
Os02g0801300 Oryza sativa ssp. japonica HOM05D003749 ORTHO05D004421 1.2e-21 107.1 105 49.5
CAN.G512.5 Capsicum annuum HOM05D003749 ORTHO05D004421 4.2e-19 98.6 69 65.2
DCAR_007518 Daucus carota HOM05D003749 ORTHO05D004421 4.6e-18 95.1 69 65.2
unitig_748.g8606 Utricularia gibba HOM05D000345 ORTHO05D000215 7.9e-18 94.4 87 56.3
Oeu027946.1 Olea europaea HOM05D003749 ORTHO05D004421 2.3e-17 92.8 78 55.1
Oeu049326.1 Olea europaea HOM05D003749 ORTHO05D004421 3.9e-17 92.0 78 55.1
Cre16.g665000 Chlamydomonas reinhardtii HOM05D003749 ORTHO05D004421 6.9e-14 81.3 120 37.5
BcaC02g12028 Brassica carinata HOM05D003749 ORTHO05D004421 9.0e-14 80.9 115 45.2
MCO04G514 Micromonas commoda HOM05D003749 ORTHO05D004421 9.0e-14 80.9 123 40.7
Sabra11G0068300 Salix brachista HOM05D000487 ORTHO05D004421 1.2e-13 80.5 57 63.2
Sabra16G0120200 Salix brachista HOM05D000487 ORTHO05D004421 1.2e-13 80.5 57 63.2
SalBow1G0221 Salvia bowleyana HOM05D003749 ORTHO05D004421 4.5e-13 78.6 65 53.8
C04p08860 Brassica napus HOM05D003749 ORTHO05D004421 3.2e-11 72.4 104 45.2
MD01G1088800 Malus domestica HOM05D003749 ORTHO05D004421 2.7e-10 69.3 76 52.6
MSTRG.15417 Avicennia marina HOM05D003749 ORTHO05D004421 1.0e-09 67.4 62 45.2
MD05G1212600 Malus domestica HOM05D003749 ORTHO05D004421 1.0e-09 67.4 70 51.4
BolC1t05893H Brassica oleracea HOM05D003749 ORTHO05D016434 6.7e-09 64.7 107 42.1
Oeu049327.1 Olea europaea HOM05D003749 ORTHO05D004421 8.8e-09 64.3 38 73.7
PRCOL_00003426 Prasinoderma coloniale HOM05D003749 ORTHO05D004421 2.0e-08 63.2 121 39.7
Zm00001eb353660 Zea mays HOM05D003749 ORTHO05D004421 4.3e-08 62.0 79 40.5
Gorai.008G075700 Gossypium raimondii HOM05D000140 ORTHO05D008077 1.1e-06 57.4 34 70.6
Gohir.D12G069201 Gossypium hirsutum HOM05D000140 ORTHO05D008077 2.4e-06 56.2 34 67.6
Gorai.009G403900 Gossypium raimondii HOM05D003749 ORTHO05D004421 4.1e-06 55.5 39 64.1


User provided reference genes

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