Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 0.0e+00 2226.1 1154 100.0
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 0.0e+00 2147.9 1154 96.3
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 0.0e+00 1340.1 1149 61.9
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 0.0e+00 1297.3 1159 59.7
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 0.0e+00 1240.7 1154 57.7
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 0.0e+00 1224.9 1170 56.6
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 0.0e+00 1219.5 1156 56.5
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 0.0e+00 1164.8 1222 52.8
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 0.0e+00 1161.0 1153 55.0
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 0.0e+00 1147.9 1146 54.7
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 0.0e+00 1138.6 1157 52.9
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 0.0e+00 1137.9 1224 51.0
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 0.0e+00 1128.2 1151 53.8
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 0.0e+00 1128.2 1151 53.7
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 0.0e+00 1124.0 1147 54.5
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 0.0e+00 1117.4 1161 53.5
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 0.0e+00 1116.7 1152 52.2
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 0.0e+00 1115.1 1148 53.5
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 0.0e+00 1107.8 1164 53.1
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 0.0e+00 1107.4 1144 52.4
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 0.0e+00 1102.4 1161 52.0
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 0.0e+00 1098.6 1236 50.9
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 0.0e+00 1095.9 1160 52.2
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 0.0e+00 1093.2 1155 52.0
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 0.0e+00 1082.4 1153 50.9
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 0.0e+00 1077.4 1143 52.2
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 0.0e+00 1075.1 1159 49.1
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 7.1e-311 1070.8 1158 50.5
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 9.5e-311 1070.5 1150 51.2
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 1.7e-309 1066.2 1158 50.4
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 3.6e-307 1058.5 1147 50.3
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 1.6e-302 1043.1 1149 49.7
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 2.1e-302 1042.7 1145 50.9
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 3.5e-302 1042.0 1165 48.8
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 4.7e-299 1031.6 1153 48.9
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.1e-298 1030.4 1151 49.3
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 7.6e-297 1024.2 1128 49.6
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 1.2e-294 1016.9 1092 52.1
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 1.3e-291 1006.9 1155 49.1
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 2.6e-289 999.2 1147 49.1
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 2.2e-288 996.1 1157 47.7
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 4.9e-288 995.0 1105 49.4
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 2.4e-287 992.6 1150 48.1
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.3e-285 986.9 1125 48.2
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 2.3e-285 986.1 1147 47.3
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 3.9e-285 985.3 1147 47.5
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 2.5e-284 982.6 1018 51.4
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 4.3e-284 981.9 1170 47.2
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 4.3e-284 981.9 1120 48.6
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 7.3e-284 981.1 1147 48.6
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 4.8e-283 978.4 1153 48.0
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 1.4e-282 976.9 1147 47.6
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 3.1e-282 975.7 1145 48.1
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 4.0e-282 975.3 1145 47.9
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 1.9e-279 966.5 1150 46.5
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 5.1e-277 958.4 1150 46.9
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 1.2e-273 947.2 1154 46.9
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 2.7e-270 936.0 1149 46.9
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 4.6e-270 935.3 1066 48.1
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 2.3e-269 932.9 1151 46.2
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 2.0e-265 919.8 1036 48.5
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 2.6e-265 919.5 1141 46.1
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 3.4e-265 919.1 1144 45.7
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 4.5e-265 918.7 1146 45.5
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 2.2e-264 916.4 1143 44.8
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 5.0e-264 915.2 1141 45.8
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 5.5e-263 911.8 1145 45.1
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 6.7e-261 904.8 1147 44.6
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 1.3e-259 900.6 1148 44.3
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 3.7e-259 899.0 1152 43.8
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 4.8e-259 898.7 1149 43.8
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 3.1e-258 896.0 1150 43.7
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 6.9e-258 894.8 1150 44.4
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 6.5e-256 888.3 1147 44.1
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.9e-255 886.7 1144 43.4
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 5.5e-255 885.2 1137 44.2
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 9.4e-255 884.4 1148 44.2
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 1.6e-254 883.6 1148 44.1
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 2.1e-254 883.2 1148 44.3
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 5.7e-252 875.2 1149 44.5
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 7.9e-246 854.7 1073 44.3
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 7.9e-246 854.7 1158 43.4
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 3.0e-245 852.8 1149 43.3
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 6.7e-245 851.7 1146 43.5
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 2.0e-244 850.1 1161 42.5
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 7.4e-244 848.2 1094 45.1
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 2.2e-243 846.7 1097 44.8
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 6.3e-243 845.1 1143 43.3
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 1.1e-242 844.3 1075 44.7
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 5.0e-240 835.5 1047 46.0
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.2e-227 793.5 949 46.3
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 1.3e-224 784.3 911 46.7
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 1.6e-222 777.3 1152 41.9
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 2.0e-209 733.8 955 44.6
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 6.0e-177 625.9 1062 38.0
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 2.0e-148 531.2 675 45.0
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 3.4e-148 530.4 1199 32.0
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 1.7e-134 485.0 1199 30.0
TAR624G0206 Trochodendron aralioides HOM05D002451 ORTHO05D005601 7.7e-124 449.5 437 54.0
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 8.2e-118 429.5 691 36.3
CSS0036196 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 8.8e-112 409.5 457 53.4
Aa31sc1931G10 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.7e-110 405.2 525 42.1
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 5.9e-100 370.2 1146 28.5
CSS0044368 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 2.2e-94 351.7 338 54.7
CDE05G1834 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 3.7e-94 350.9 444 49.1
Cpa.g.sc25.8 Carica papaya HOM05D002451 ORTHO05D005601 6.4e-94 350.1 512 40.4
Aa31LG11G5130 Aethionema arabicum HOM05D002451 ORTHO05D005601 3.5e-84 317.8 448 42.0
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 2.1e-81 308.5 233 63.5
CBR_g26190 Chara braunii HOM05D002451 ORTHO05D005601 9.9e-79 299.7 1295 24.8
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 8.1e-73 280.0 230 58.7
TAR624G0246 Trochodendron aralioides HOM05D002451 ORTHO05D005601 5.2e-64 250.8 193 69.4
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 9.3e-61 240.0 311 47.3
Cpa.g.sc25.4 Carica papaya HOM05D002451 ORTHO05D005601 3.4e-55 221.5 155 63.9
Cpa.g.sc25.5 Carica papaya HOM05D002451 ORTHO05D005601 5.4e-53 214.2 263 46.0
Sc17g0002930 Simmondsia chinensis HOM05D002451 ORTHO05D005601 6.7e-51 207.2 178 58.4
TAR624G0921 Trochodendron aralioides HOM05D002451 ORTHO05D005601 8.7e-51 206.8 251 50.2
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.3e-46 193.0 326 36.5
HPP92_007773 Vanilla planifolia HOM05D002451 ORTHO05D005601 1.5e-39 169.5 159 55.3
Sabra03G0029200 Salix brachista HOM05D002451 ORTHO05D005601 4.5e-39 167.9 181 52.5
TAR624G0431 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.4e-37 162.9 116 67.2
Psat3g036640 Pisum sativum HOM05D002451 ORTHO05D005601 2.5e-29 135.6 188 40.4
EL10Ac9g21205 Beta vulgaris HOM05D002451 ORTHO05D005601 2.7e-28 132.1 180 43.9
unitig_88.g27602 Utricularia gibba HOM05D002451 ORTHO05D005601 1.3e-25 123.2 132 49.2
Zm00001eb320400 Zea mays HOM05D002451 ORTHO05D005601 2.8e-25 122.1 277 33.2
A06p15140 Brassica napus HOM05D002451 ORTHO05D020166 4.1e-24 118.2 141 46.1
BraA06t24629Z Brassica rapa HOM05D002451 ORTHO05D020166 4.1e-24 118.2 141 46.1
MCO12G207 Micromonas commoda HOM05D002451 ORTHO05D005601 5.3e-24 117.9 350 28.0
Psat4g171400 Pisum sativum HOM05D002451 ORTHO05D005601 5.3e-24 117.9 138 45.7
CSS0026050 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 2.0e-23 115.9 98 60.2
CSS0028178 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 2.0e-23 115.9 98 60.2
Cpa.g.sc25.3 Carica papaya HOM05D002451 ORTHO05D005601 2.0e-23 115.9 88 63.6
SEGI_23779 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 2.6e-23 115.5 118 50.8
Aa31LG9G10320 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.4e-21 109.8 122 48.4
HPP92_007804 Vanilla planifolia HOM05D002451 ORTHO05D005601 1.4e-21 109.8 165 42.4
CSS0023144 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 4.2e-21 108.2 121 47.1
Lj1g0017121 Lotus japonicus HOM05D002451 ORTHO05D005601 7.4e-18 97.4 85 56.5
SHI11090 Sapria himalayana HOM05D002451 ORTHO05D005601 4.8e-17 94.7 76 51.3
Cre13.g605050 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D005601 8.2e-17 94.0 153 36.6
SHI11089 Sapria himalayana HOM05D002451 ORTHO05D005601 1.8e-16 92.8 75 58.7
SHI11092 Sapria himalayana HOM05D002451 ORTHO05D005601 9.1e-16 90.5 152 36.2
Zm00001eb029900 Zea mays HOM05D002451 ORTHO05D005601 4.5e-15 88.2 90 51.1
Peaxi162Scf00038g01031 Petunia axillaris HOM05D002451 ORTHO05D005601 3.8e-14 85.1 55 72.7
vmacro17797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 1.2e-12 80.1 81 53.1
SGA_v2.0_scaffold123G33404 Striga asiatica HOM05D002451 ORTHO05D005601 2.1e-12 79.3 92 43.5
TPR.G18835 Trifolium pratense HOM05D002451 ORTHO05D005601 1.1e-10 73.6 62 61.3
Hund28828 Selenicereus undatus HOM05D002451 ORTHO05D005601 3.3e-10 72.0 61 59.0
Hund28869 Selenicereus undatus HOM05D002451 ORTHO05D005601 7.4e-10 70.9 61 59.0
TPR.G18837 Trifolium pratense HOM05D002451 ORTHO05D005601 1.4e-08 66.6 73 49.3
Medtr5g055460 Medicago truncatula HOM05D002451 ORTHO05D005601 4.5e-07 61.6 48 54.2


User provided reference genes

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