Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 3.4e-106 388.7 246 100.0
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.5e-98 363.2 246 78.5
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 4.4e-85 318.5 246 69.9
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 8.2e-84 314.3 246 67.9
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 5.3e-83 311.6 246 67.5
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 2.7e-82 309.3 246 67.1
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.9e-81 305.8 246 67.1
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 3.8e-81 305.4 246 66.3
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 5.0e-81 305.1 245 65.3
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.5e-80 303.5 246 65.4
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 1.5e-80 303.5 246 65.4
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 2.5e-80 302.8 246 66.3
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 3.2e-80 302.4 246 65.4
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 5.5e-80 301.6 265 63.0
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 7.2e-80 301.2 246 65.9
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 9.4e-80 300.8 246 65.4
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 9.4e-80 300.8 246 66.7
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.2e-79 300.4 246 64.2
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 1.6e-79 300.1 246 65.4
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 2.1e-79 299.7 243 65.8
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 2.7e-79 299.3 246 65.4
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 2.7e-79 299.3 246 63.8
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 2.7e-79 299.3 246 64.2
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 8.0e-79 297.7 246 65.0
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 1.4e-78 297.0 246 63.0
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 1.8e-78 296.6 246 63.8
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 6.8e-78 294.7 246 63.4
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 8.8e-78 294.3 246 63.0
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 2.0e-77 293.1 246 63.4
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 2.6e-77 292.7 246 62.6
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 2.6e-77 292.7 246 63.4
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.6e-77 292.7 246 63.4
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 3.4e-77 292.4 246 64.2
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 3.4e-77 292.4 247 63.6
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 3.4e-77 292.4 243 62.6
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 3.4e-77 292.4 246 63.0
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 5.7e-77 291.6 243 62.6
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 5.7e-77 291.6 250 63.2
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 7.5e-77 291.2 246 62.6
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 7.5e-77 291.2 246 63.4
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.3e-76 290.4 247 62.8
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.3e-76 290.4 250 64.8
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 1.3e-76 290.4 243 62.6
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.7e-76 290.0 246 62.2
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 1.7e-76 290.0 246 62.2
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 2.8e-76 289.3 243 63.0
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 2.8e-76 289.3 246 63.4
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 6.3e-76 288.1 247 62.8
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 1.4e-75 287.0 246 61.8
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 2.4e-75 286.2 246 62.6
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 3.1e-75 285.8 248 62.9
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 9.1e-75 284.3 240 62.9
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 1.2e-74 283.9 246 61.0
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 2.0e-74 283.1 246 61.8
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 3.5e-74 282.3 246 61.8
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 4.5e-74 282.0 246 61.4
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 7.7e-74 281.2 246 60.6
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 7.7e-74 281.2 246 60.6
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 1.0e-73 280.8 246 60.6
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 2.2e-73 279.6 246 60.6
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 2.2e-73 279.6 246 60.2
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 6.5e-73 278.1 251 60.2
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 1.1e-72 277.3 246 60.6
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 1.1e-72 277.3 247 60.3
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 2.5e-72 276.2 246 60.2
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 3.2e-72 275.8 246 61.0
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.2e-72 275.8 271 57.2
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 7.2e-72 274.6 239 63.6
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 2.1e-71 273.1 246 59.3
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 3.6e-71 272.3 246 58.9
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 4.4e-69 265.4 232 60.3
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 7.5e-69 264.6 246 60.6
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 3.7e-68 262.3 247 57.5
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 3.7e-68 262.3 246 58.5
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 6.3e-68 261.5 246 56.5
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 8.3e-68 261.2 246 59.8
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 1.1e-67 260.8 248 57.7
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.1e-67 260.8 283 55.5
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 4.1e-67 258.8 248 58.5
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 4.5e-66 255.4 241 57.3
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 5.9e-66 255.0 241 57.3
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 5.9e-66 255.0 248 57.7
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 8.6e-65 251.1 229 62.0
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.1e-64 250.8 246 56.9
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.3e-64 249.2 217 61.3
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 3.3e-64 249.2 246 56.5
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 2.1e-63 246.5 248 54.4
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 5.2e-62 241.9 217 60.8
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 2.0e-61 240.0 246 54.1
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 9.8e-61 237.7 243 54.7
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 4.9e-60 235.3 248 53.2
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 8.3e-60 234.6 246 54.1
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 1.8e-59 233.4 282 50.7
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.5e-56 223.8 249 53.0
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 3.1e-54 216.1 247 50.6
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 4.9e-52 208.8 245 49.4
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 2.0e-50 203.4 192 59.4
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 1.3e-49 200.7 193 57.0
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 6.6e-49 198.4 295 44.4
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 5.6e-48 195.3 313 41.5
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 2.1e-47 193.4 196 55.1
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 2.3e-46 189.9 241 45.2
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 9.8e-45 184.5 255 45.1
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 6.4e-44 181.8 230 49.6
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 1.6e-39 167.2 120 66.7
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 8.9e-38 161.4 239 44.8
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.5e-37 160.6 249 41.4
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 3.5e-34 149.4 248 38.7
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 2.3e-33 146.7 116 59.5
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 5.1e-33 145.6 85 82.4
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.9e-32 143.7 111 64.9
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 4.0e-30 136.0 115 57.4
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 7.1e-27 125.2 84 69.0
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 3.8e-20 102.8 70 68.6
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 1.9e-16 90.5 51 84.3
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 3.6e-15 86.3 71 64.8
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 2.4e-14 83.6 49 85.7
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 5.3e-14 82.4 49 85.7
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.2e-13 81.3 162 35.8
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.7e-12 77.4 50 78.0
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.7e-10 70.1 92 43.5
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 4.6e-10 69.3 135 34.1
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.3e-09 67.8 39 84.6
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 5.6e-08 62.4 238 28.6
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 4.8e-07 59.3 40 72.5
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 6.9e-06 55.5 40 70.0


User provided reference genes

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