Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 3.3e-192 674.9 336 100.0
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 7.1e-163 577.4 331 89.7
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 3.1e-134 482.3 337 73.0
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 2.7e-130 469.2 335 70.4
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.6e-130 468.8 342 69.6
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 6.1e-130 468.0 342 69.6
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.4e-129 466.8 339 70.5
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.3e-129 466.1 342 69.3
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 3.0e-129 465.7 345 69.3
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.3e-128 462.2 339 69.6
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.7e-127 459.9 339 69.9
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.2e-127 459.5 339 71.1
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.1e-126 455.3 335 69.0
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 5.3e-126 454.9 340 67.6
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.6e-125 453.4 282 77.3
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 4.5e-125 451.8 319 70.5
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 5.9e-125 451.4 282 77.3
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 7.7e-125 451.1 307 73.6
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 3.8e-124 448.7 323 71.2
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 1.5e-123 446.8 338 67.8
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.5e-123 446.8 329 70.5
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 2.5e-123 446.0 324 70.1
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 3.2e-123 445.7 331 68.9
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 5.5e-123 444.9 343 66.8
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 5.5e-123 444.9 329 69.0
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 9.4e-123 444.1 279 76.7
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 1.2e-122 443.7 334 68.6
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.6e-122 443.4 327 67.9
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.6e-122 443.4 320 69.1
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.7e-122 442.6 320 70.9
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 3.6e-122 442.2 329 68.4
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 8.0e-122 441.0 285 74.0
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.4e-121 440.3 326 68.1
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.4e-121 440.3 337 67.4
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.8e-121 439.9 336 65.2
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 6.7e-121 438.0 319 68.3
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 3.3e-120 435.6 316 70.9
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 4.4e-120 435.3 339 64.6
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 4.4e-120 435.3 285 73.0
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 5.7e-120 434.9 307 71.7
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 7.5e-120 434.5 320 68.4
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 7.5e-120 434.5 297 71.7
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 9.7e-120 434.1 349 65.0
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.3e-119 433.7 279 74.9
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 1.3e-119 433.7 304 70.4
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.7e-119 433.3 320 68.1
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 2.8e-119 432.6 262 79.4
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 3.7e-119 432.2 281 74.0
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 4.8e-119 431.8 323 67.5
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.4e-118 429.5 281 75.1
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 3.1e-118 429.1 299 71.9
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 5.3e-118 428.3 281 74.0
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 5.3e-118 428.3 384 59.9
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.6e-117 426.8 315 68.6
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.0e-117 426.4 309 68.3
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.0e-117 426.4 312 69.9
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.5e-117 425.6 279 72.4
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 3.5e-117 425.6 288 72.9
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.0e-116 424.1 321 65.7
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.3e-116 423.7 267 74.9
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.3e-116 423.7 312 68.3
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.3e-116 423.7 327 66.4
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 3.8e-116 422.2 263 76.8
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 8.5e-116 421.0 317 65.9
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.1e-115 420.6 299 68.9
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.1e-115 420.6 373 60.9
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.1e-115 420.6 311 65.9
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.9e-115 419.9 315 66.0
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 3.2e-115 419.1 310 68.1
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 5.5e-115 418.3 309 66.3
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 5.5e-115 418.3 338 63.6
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 7.2e-115 417.9 289 72.0
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 7.2e-115 417.9 327 65.1
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 7.2e-115 417.9 315 65.1
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 7.2e-115 417.9 344 65.1
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 1.0e-113 414.1 309 66.3
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.8e-113 413.3 309 66.3
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 3.0e-113 412.5 257 75.9
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 3.0e-113 412.5 317 65.6
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 8.8e-113 411.0 309 66.0
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.2e-112 410.6 315 65.7
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.2e-112 410.6 264 73.9
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 2.2e-111 406.4 324 65.1
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 6.3e-111 404.8 280 72.1
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.4e-110 402.9 279 70.3
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 3.5e-109 399.1 298 65.4
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 7.7e-109 397.9 259 72.2
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.3e-108 397.1 311 64.6
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.9e-107 393.3 282 69.1
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.8e-105 386.7 417 51.3
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 5.4e-102 375.2 230 79.1
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 2.1e-98 363.2 325 57.5
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 1.9e-91 340.1 259 59.1
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 2.6e-88 329.7 259 58.3
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 8.3e-87 324.7 211 75.4
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.1e-86 322.4 296 59.1
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 1.3e-84 317.4 275 57.8
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 3.0e-84 316.2 237 62.0
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.8e-82 309.7 261 55.9
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.1e-81 307.8 317 54.3
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 9.2e-78 294.7 279 55.6
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.7e-69 266.5 157 75.8
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 6.9e-65 251.9 153 76.5
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 3.3e-59 233.0 147 74.8
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.4e-57 227.6 163 71.8
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 5.3e-57 225.7 134 80.6
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 5.4e-54 215.7 267 41.6
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 7.1e-54 215.3 135 76.3
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 5.8e-48 195.7 134 65.7
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.0e-44 184.9 212 48.1
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 8.4e-39 165.2 97 79.4
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 9.0e-33 145.2 254 34.6
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.1e-30 138.3 277 31.4
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.1e-30 138.3 306 31.7
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.7e-15 87.8 48 70.8
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.9e-15 87.0 99 48.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 4.7e-13 79.7 52 69.2


User provided reference genes

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