Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 3.1e-146 521.9 293 100.0
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 3.4e-145 518.5 293 99.3
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 2.3e-109 399.4 292 81.2
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.2e-108 397.1 290 79.0
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 1.5e-108 396.7 293 78.5
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 5.7e-108 394.8 288 78.8
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 4.8e-107 391.7 246 79.7
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 9.1e-106 387.5 290 77.6
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 2.7e-105 386.0 246 77.2
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 2.7e-105 386.0 290 78.3
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 2.7e-105 386.0 246 77.2
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 4.5e-105 385.2 246 76.8
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 7.7e-105 384.4 290 78.3
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 7.7e-105 384.4 292 78.8
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 1.7e-104 383.3 295 77.3
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 2.2e-104 382.9 246 76.0
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 4.2e-103 378.6 245 78.4
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 9.4e-103 377.5 257 73.9
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 9.4e-103 377.5 245 76.3
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 9.4e-103 377.5 290 76.9
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 6.1e-102 374.8 292 77.7
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 8.0e-102 374.4 244 77.5
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 1.4e-101 373.6 245 75.5
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 1.8e-101 373.2 246 74.4
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 5.2e-101 371.7 290 75.5
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 8.8e-101 370.9 244 76.2
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 1.5e-100 370.2 293 76.8
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 1.5e-100 370.2 293 76.8
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.0e-100 369.8 246 74.0
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 3.4e-100 369.0 292 76.4
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 3.4e-100 369.0 245 74.3
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 3.4e-100 369.0 245 74.3
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 3.4e-100 369.0 245 74.3
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 4.4e-100 368.6 265 72.1
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 4.4e-100 368.6 245 75.1
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 5.7e-100 368.2 290 75.2
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 7.5e-100 367.9 246 74.8
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 1.3e-99 367.1 245 76.3
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 2.2e-99 366.3 246 74.0
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.8e-99 365.9 246 72.8
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 2.8e-99 365.9 293 74.1
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 2.8e-99 365.9 290 75.2
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 2.8e-99 365.9 246 74.8
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 3.7e-99 365.5 293 74.1
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 2.4e-98 362.8 242 76.0
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 2.4e-98 362.8 236 75.0
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 3.1e-98 362.5 293 74.7
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 1.6e-97 360.1 246 72.0
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 2.0e-97 359.8 246 73.6
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 2.7e-97 359.4 295 74.2
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 3.5e-97 359.0 244 74.6
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 8.6e-96 354.4 227 77.5
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 5.5e-95 351.7 245 70.2
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.2e-94 350.5 237 73.0
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 1.8e-93 346.7 246 70.3
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 4.0e-93 345.5 292 72.3
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 5.2e-93 345.1 292 71.9
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 1.2e-92 344.0 289 72.0
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 1.5e-92 343.6 246 69.9
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 1.5e-92 343.6 243 72.8
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 2.6e-92 342.8 228 75.0
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 3.4e-92 342.4 246 70.3
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 3.4e-92 342.4 293 73.7
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 3.4e-92 342.4 241 71.0
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 5.7e-92 341.7 241 71.0
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 7.5e-92 341.3 246 70.3
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.3e-91 340.5 248 70.6
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 2.2e-91 339.7 248 70.6
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 2.8e-91 339.3 248 71.0
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 8.3e-91 337.8 237 71.7
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 1.8e-90 336.7 293 71.3
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 1.8e-90 336.7 244 69.3
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 2.4e-90 336.3 239 70.3
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 4.1e-90 335.5 281 63.0
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.2e-89 334.0 294 69.0
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 1.2e-89 334.0 246 69.1
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 2.0e-89 333.2 298 70.1
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 2.0e-89 333.2 295 71.5
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 1.0e-88 330.9 299 60.5
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 1.7e-88 330.1 216 75.9
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 3.9e-88 328.9 214 77.1
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 1.9e-87 326.6 247 65.6
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 1.2e-86 323.9 295 69.5
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 2.1e-86 323.2 251 68.5
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 2.1e-86 323.2 247 67.6
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 6.1e-86 321.6 227 69.6
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 1.4e-85 320.5 296 68.2
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.2e-84 317.4 250 66.4
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 2.0e-84 316.6 247 66.0
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 2.6e-84 316.2 250 66.4
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 2.6e-84 316.2 247 67.2
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 9.8e-84 314.3 250 66.0
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 9.8e-84 314.3 228 66.7
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 3.7e-83 312.4 248 63.7
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 4.9e-83 312.0 247 66.8
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 6.4e-83 311.6 267 63.7
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 8.3e-83 311.2 290 67.2
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 1.4e-82 310.5 245 64.9
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 2.4e-82 309.7 251 65.7
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 6.0e-81 305.1 243 65.0
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 1.2e-78 297.4 293 64.8
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 2.8e-78 296.2 240 62.9
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 4.7e-78 295.4 253 63.6
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 1.8e-77 293.5 238 64.7
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 3.1e-77 292.7 252 63.5
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 1.2e-76 290.8 255 63.1
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.0e-76 290.0 243 63.0
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 3.4e-76 289.3 252 62.7
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 2.2e-75 286.6 300 64.7
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 2.2e-75 286.6 302 64.6
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 8.3e-75 284.6 199 71.9
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 4.1e-74 282.3 232 75.0
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 9.2e-74 281.2 250 62.0
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 2.7e-73 279.6 250 61.2
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 1.7e-72 276.9 292 62.0
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 1.2e-70 270.8 255 61.2
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 3.6e-70 269.2 204 67.2
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 4.7e-70 268.9 190 69.5
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 5.2e-69 265.4 248 60.9
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 5.2e-69 265.4 246 60.6
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 8.9e-69 264.6 243 59.3
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 8.9e-69 264.6 250 58.8
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 8.6e-64 248.1 245 59.2
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 5.6e-63 245.4 237 58.6
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 1.6e-62 243.8 203 62.6
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 1.1e-61 241.1 243 65.0
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 1.8e-61 240.4 250 54.4
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 1.7e-59 233.8 251 56.2
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 2.9e-59 233.0 223 57.8
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 3.9e-56 222.6 253 62.1
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 1.3e-54 217.6 252 50.0
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 5.1e-40 169.1 249 57.0
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 4.0e-37 159.5 167 51.5
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 9.0e-37 158.3 133 63.2
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.9e-31 140.6 257 38.9
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 1.6e-30 137.5 247 39.7
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 3.7e-30 136.3 238 39.5
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 9.3e-26 121.7 261 35.2
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 1.5e-23 114.4 170 47.6
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 8.2e-22 108.6 52 96.2
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.8e-21 107.5 235 34.9
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 5.3e-21 105.9 237 32.5
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 5.3e-21 105.9 240 34.6
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 6.9e-21 105.5 235 35.3
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 3.4e-20 103.2 235 34.0
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.0e-19 101.7 247 32.4
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.2e-19 100.5 239 33.9
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 5.0e-19 99.4 238 34.0
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 5.0e-19 99.4 242 33.9
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 8.5e-19 98.6 236 34.7
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 4.2e-18 96.3 247 33.6
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 4.2e-18 96.3 242 32.2
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.2e-17 94.7 249 31.3
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 6.1e-17 92.4 269 33.5
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 1.4e-16 91.3 243 32.9
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 2.3e-16 90.5 243 30.0
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 2.5e-15 87.0 56 71.4
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 4.3e-15 86.3 46 84.8
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.7e-14 84.3 217 33.6
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 1.1e-13 81.6 54 66.7
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 1.8e-13 80.9 210 33.8
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 4.5e-12 76.3 205 33.2
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 7.7e-12 75.5 252 30.2
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 3.8e-11 73.2 256 28.1
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 5.0e-11 72.8 178 31.5
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 7.9e-09 65.5 106 38.7
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 3.9e-08 63.2 51 52.9
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 6.7e-08 62.4 169 30.8
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 3.3e-07 60.1 48 54.2
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 3.3e-07 60.1 262 26.0
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 4.4e-07 59.7 189 28.6
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 4.4e-07 59.7 51 51.0
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 9.7e-07 58.5 30 73.3
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 4.8e-06 56.2 58 48.3


User provided reference genes

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