Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2743 Papaver somniferum HOM05D003048 ORTHO05D003418 2.2e-66 256.1 200 100.0
PSO339G3897 Papaver somniferum HOM05D003048 ORTHO05D003418 1.6e-29 133.7 139 89.9
Hma1.2p1_0161F.1_g071730 Hydrangea macrophylla HOM05D003048 ORTHO05D003418 8.9e-20 101.3 148 70.3
Hma1.2p1_1289F.1_g273350 Hydrangea macrophylla HOM05D003048 ORTHO05D003418 4.4e-19 99.0 148 66.9
TAR362G0400 Trochodendron aralioides HOM05D003048 ORTHO05D003418 1.3e-18 97.4 148 64.9
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 3.7e-18 95.9 148 72.3
MELO3C012715.2 Cucumis melo HOM05D003048 ORTHO05D003418 1.1e-17 94.4 148 64.2
Nn4g26645 Nelumbo nucifera HOM05D003048 ORTHO05D003418 3.2e-17 92.8 148 62.8
Actinidia33398 Actinidia chinensis HOM05D003048 ORTHO05D003418 7.1e-17 91.7 148 70.3
Manes.13G057300 Manihot esculenta HOM05D003048 ORTHO05D003418 9.2e-17 91.3 150 70.0
Sed0020139 Sechium edule HOM05D003048 ORTHO05D003418 2.1e-16 90.1 148 62.2
Lj3g0013554 Lotus japonicus HOM05D003048 ORTHO05D003418 7.8e-16 88.2 153 66.7
Thecc.01G205900 Theobroma cacao HOM05D003048 ORTHO05D003418 7.8e-16 88.2 150 69.3
Lalb_Chr04g0254561 Lupinus albus HOM05D003048 ORTHO05D003418 1.0e-15 87.8 148 62.8
Oeu003680.1 Olea europaea HOM05D003048 ORTHO05D003418 1.3e-15 87.4 148 66.9
ClCG09G007970 Citrullus lanatus HOM05D003048 ORTHO05D003418 2.3e-15 86.7 150 71.3
Oeu049578.2 Olea europaea HOM05D003048 ORTHO05D003418 2.3e-15 86.7 148 66.2
Psat4g158640 Pisum sativum HOM05D003048 ORTHO05D003418 2.3e-15 86.7 148 65.5
CAN.G844.2 Capsicum annuum HOM05D003048 ORTHO05D003418 3.9e-15 85.9 148 61.5
VMungo0331G0536 Vigna mungo HOM05D003048 ORTHO05D003418 3.9e-15 85.9 152 69.1
CAN.G181.42 Capsicum annuum HOM05D003048 ORTHO05D003418 6.6e-15 85.1 148 56.8
Phvul.010G110800 Phaseolus vulgaris HOM05D003048 ORTHO05D003418 8.6e-15 84.7 152 68.4
TWI18G1456 Tripterygium wilfordii HOM05D003048 ORTHO05D003418 1.1e-14 84.3 148 65.5
Sed0013263 Sechium edule HOM05D003048 ORTHO05D003418 2.5e-14 83.2 148 58.8
Hund02813 Selenicereus undatus HOM05D003048 ORTHO05D003418 2.5e-14 83.2 148 60.8
Sabra09G0122400 Salix brachista HOM05D003048 ORTHO05D003418 4.3e-14 82.4 165 55.8
arahy.Tifrunner.gnm1.ann1.G94RKZ Arachis hypogaea HOM05D003048 ORTHO05D003418 5.6e-14 82.0 154 69.5
Medtr8g028015 Medicago truncatula HOM05D003048 ORTHO05D003418 5.6e-14 82.0 148 64.9
Dinv28784 Davidia involucrata HOM05D003048 ORTHO05D003418 1.6e-13 80.5 140 66.4
Lalb_Chr10g0100241 Lupinus albus HOM05D003048 ORTHO05D003418 1.6e-13 80.5 148 53.4
Aqoxy3G03183 Aquilegia oxysepala HOM05D003048 ORTHO05D003418 2.1e-13 80.1 150 72.0
CsaV3_7G027100 Cucumis sativus L. HOM05D003048 ORTHO05D003418 2.1e-13 80.1 140 68.6
HanXRQChr01g0010561 Helianthus annuus HOM05D003048 ORTHO05D003418 2.1e-13 80.1 148 68.2
arahy.Tifrunner.gnm1.ann1.1M3QP5 Arachis hypogaea HOM05D003048 ORTHO05D003418 2.8e-13 79.7 154 68.8
MD05G1152100 Malus domestica HOM05D003048 ORTHO05D003418 3.6e-13 79.3 150 69.3
TWI75G1171 Tripterygium wilfordii HOM05D003048 ORTHO05D003418 3.6e-13 79.3 148 64.9
Actinidia34525 Actinidia chinensis HOM05D003048 ORTHO05D003418 8.1e-13 78.2 148 62.8
Sc05g0001620 Simmondsia chinensis HOM05D003048 ORTHO05D003418 8.1e-13 78.2 148 65.5
Actinidia23125 Actinidia chinensis HOM05D003048 ORTHO05D003418 1.1e-12 77.8 148 62.8
Duzib133G1072 Durio zibethinus HOM05D003048 ORTHO05D003418 1.1e-12 77.8 142 66.9
MSTRG.18512 Avicennia marina HOM05D003048 ORTHO05D003418 1.4e-12 77.4 151 58.9
Peaxi162Scf00372g00512 Petunia axillaris HOM05D003048 ORTHO05D003418 1.4e-12 77.4 147 66.0
PGSC0003DMG400020656 Solanum tuberosum HOM05D003048 ORTHO05D003418 1.4e-12 77.4 143 60.8
Potri.009G156200 Populus trichocarpa HOM05D003048 ORTHO05D003418 1.8e-12 77.0 150 65.3
FAN27G0893 Fragaria x ananassa HOM05D003048 ORTHO05D003418 3.1e-12 76.3 148 66.2
Nn3g20294 Nelumbo nucifera HOM05D003048 ORTHO05D003418 3.1e-12 76.3 148 68.9
THA.LOC104799143 Tarenaya hassleriana HOM05D003048 ORTHO05D003418 3.1e-12 76.3 152 65.8
Ah.02g110990 Amaranthus hybridus HOM05D003048 ORTHO05D003418 8.9e-12 74.7 150 68.7
CSS0050244 Camellia sinensis var. sinensis HOM05D003048 ORTHO05D003418 1.2e-11 74.3 143 67.1
ECA247G3704 Erigeron canadensis HOM05D003048 ORTHO05D003418 2.6e-11 73.2 148 56.1
PSO339G4119 Papaver somniferum HOM05D003048 ORTHO05D003418 2.6e-11 73.2 148 58.8
PGSC0003DMG400027668 Solanum tuberosum HOM05D003048 ORTHO05D003418 4.4e-11 72.4 151 66.9
vmacro02843 Vaccinium macrocarpon HOM05D003048 ORTHO05D003418 4.4e-11 72.4 142 61.3
CiPaw.14G044600 Carya illinoinensis HOM05D003048 ORTHO05D003418 5.8e-11 72.0 148 48.6
FAN27G2632 Fragaria x ananassa HOM05D003048 ORTHO05D003418 5.8e-11 72.0 148 63.5
Carub.0006s1073 Capsella rubella HOM05D003048 ORTHO05D003418 7.6e-11 71.6 150 64.7
FAN15G3415 Fragaria x ananassa HOM05D003048 ORTHO05D003418 7.6e-11 71.6 149 67.8
FAN24G0725 Fragaria x ananassa HOM05D003048 ORTHO05D003418 7.6e-11 71.6 149 67.8
Glyma.07G058600 Glycine max HOM05D003048 ORTHO05D003418 9.9e-11 71.2 56 57.1
TWI36G0059 Tripterygium wilfordii HOM05D003048 ORTHO05D003418 9.9e-11 71.2 139 64.0
BraA10t44625Z Brassica rapa HOM05D003048 ORTHO05D003418 1.3e-10 70.9 151 66.2
Lalb_Chr17g0342311 Lupinus albus HOM05D003048 ORTHO05D003418 1.3e-10 70.9 56 57.1
AL6G23020 Arabidopsis lyrata HOM05D003048 ORTHO05D003418 1.7e-10 70.5 152 64.5
DCAR_012709 Daucus carota HOM05D003048 ORTHO05D003418 1.7e-10 70.5 56 55.4
Os12g0614000 Oryza sativa ssp. japonica HOM05D003048 ORTHO05D003418 1.7e-10 70.5 55 60.0
RcHm_v2.0_Chr6g0281841 Rosa chinensis HOM05D003048 ORTHO05D003418 1.7e-10 70.5 148 66.2
GSVIVG01001920001 Vitis vinifera HOM05D003048 ORTHO05D003418 1.7e-10 70.5 56 58.9
Atru.chr6.3498 Acer truncatum HOM05D003048 ORTHO05D003418 2.2e-10 70.1 56 55.4
AL6G30980 Arabidopsis lyrata HOM05D003048 ORTHO05D003418 2.2e-10 70.1 153 58.2
BcaB01g05417 Brassica carinata HOM05D003048 ORTHO05D003418 2.2e-10 70.1 153 62.7
A10p25570 Brassica napus HOM05D003048 ORTHO05D003418 2.2e-10 70.1 151 66.2
MD10G1146700 Malus domestica HOM05D003048 ORTHO05D003418 2.2e-10 70.1 56 58.9
BcaNung06881 Brassica carinata HOM05D003048 ORTHO05D003418 2.9e-10 69.7 151 66.2
CiPaw.13G057200 Carya illinoinensis HOM05D003048 ORTHO05D003418 2.9e-10 69.7 112 69.6
Eucgr.H00687 Eucalyptus grandis HOM05D003048 ORTHO05D003418 2.9e-10 69.7 148 64.2
HanXRQChr10g0281231 Helianthus annuus HOM05D003048 ORTHO05D003418 2.9e-10 69.7 56 55.4
Manes.12G057100 Manihot esculenta HOM05D003048 ORTHO05D003418 2.9e-10 69.7 149 70.5
TPR.G1118 Trifolium pratense HOM05D003048 ORTHO05D003418 2.9e-10 69.7 56 55.4
MBI18_g11214_MAGBIO Magnolia biondii HOM05D003048 ORTHO05D003418 3.8e-10 69.3 55 58.2
MBI18_g32438_MAGBIO Magnolia biondii HOM05D003048 ORTHO05D003418 3.8e-10 69.3 55 58.2
Rhsim01G0246800 Rhododendron simsii HOM05D003048 ORTHO05D003418 3.8e-10 69.3 140 62.1
AT5G12230 Arabidopsis thaliana HOM05D003048 ORTHO05D003418 4.9e-10 68.9 152 61.8
Solyc06g082900.3 Solanum lycopersicum HOM05D003048 ORTHO05D003418 4.9e-10 68.9 151 64.9
EL10Ac5g10577 Beta vulgaris HOM05D003048 ORTHO05D003418 6.4e-10 68.6 169 56.8
ECA248G1887 Erigeron canadensis HOM05D003048 ORTHO05D003418 6.4e-10 68.6 56 53.6
Cfa010615 Carpinus fangiana HOM05D003048 ORTHO05D003418 8.4e-10 68.2 56 53.6
Migut.N00683 Erythranthe guttata HOM05D003048 ORTHO05D003418 8.4e-10 68.2 148 64.9
Sopen06g034260 Solanum pennellii HOM05D003048 ORTHO05D003418 8.4e-10 68.2 151 65.6
Gohir.D07G201500 Gossypium hirsutum HOM05D003048 ORTHO05D003418 1.1e-09 67.8 150 63.3
QL09p045652 Quercus lobata HOM05D003048 ORTHO05D003418 1.1e-09 67.8 56 55.4
Sp6g31410 Schrenkiella parvula HOM05D003048 ORTHO05D003418 1.1e-09 67.8 152 65.1
CDE11G0614 Ceratophyllum demersum HOM05D000834 ORTHO05D000909 1.4e-09 67.4 56 55.4
Gorai.N001700 Gossypium raimondii HOM05D003048 ORTHO05D003418 1.4e-09 67.4 144 59.0
Zm00001eb042760 Zea mays HOM05D003048 ORTHO05D003418 1.4e-09 67.4 56 57.1
HanXRQChr01g0025141 Helianthus annuus HOM05D003048 ORTHO05D003418 1.9e-09 67.0 149 55.0
Os03g0641700 Oryza sativa ssp. japonica HOM05D003048 ORTHO05D003418 1.9e-09 67.0 56 58.9
Cpa.g.sc33.149 Carica papaya HOM05D003048 ORTHO05D003418 2.4e-09 66.6 56 53.6
Gohir.A07G161500 Gossypium hirsutum HOM05D003048 ORTHO05D003418 2.4e-09 66.6 140 61.4
Nitab4.5_0002311g0160 Nicotiana tabacum HOM05D003048 ORTHO05D003418 2.4e-09 66.6 148 60.8
HPP92_020598 Vanilla planifolia HOM05D003048 ORTHO05D003418 2.4e-09 66.6 139 58.3
Gohir.D07G168300 Gossypium hirsutum HOM05D003048 ORTHO05D003418 3.2e-09 66.2 142 59.2
Lj2A213G19 Lonicera japonica HOM05D003048 ORTHO05D003418 3.2e-09 66.2 57 52.6
Potri.004G193800 Populus trichocarpa HOM05D003048 ORTHO05D003418 3.2e-09 66.2 152 65.8
FvH4_2g17320 Fragaria vesca HOM05D003048 ORTHO05D003418 4.1e-09 65.9 56 53.6
Glyma.16G027500 Glycine max HOM05D003048 ORTHO05D003418 4.1e-09 65.9 56 55.4
Gohir.A07G195100 Gossypium hirsutum HOM05D003048 ORTHO05D003418 4.1e-09 65.9 150 62.7
Carub.0006s1782 Capsella rubella HOM05D003048 ORTHO05D003418 5.4e-09 65.5 152 63.2
Nitab4.5_0002641g0050 Nicotiana tabacum HOM05D003048 ORTHO05D003418 5.4e-09 65.5 148 58.8
Sopen09g017930 Solanum pennellii HOM05D003048 ORTHO05D003418 5.4e-09 65.5 148 61.5
Zm00001eb136170 Zea mays HOM05D003048 ORTHO05D003418 5.4e-09 65.5 55 56.4
Cfa010612 Carpinus fangiana HOM05D003048 ORTHO05D003418 7.1e-09 65.1 112 69.6
Gorai.001G226200 Gossypium raimondii HOM05D003048 ORTHO05D003418 9.2e-09 64.7 150 62.7
CARHR200890 Cardamine hirsuta HOM05D003048 ORTHO05D003418 1.2e-08 64.3 150 62.7
CDE05G2170 Ceratophyllum demersum HOM05D003048 ORTHO05D003418 1.2e-08 64.3 56 51.8
TAR629G2431 Trochodendron aralioides HOM05D003048 ORTHO05D003418 1.2e-08 64.3 148 54.7
Zm00001eb031730 Zea mays HOM05D003048 ORTHO05D003418 1.2e-08 64.3 55 56.4
AT5G19480 Arabidopsis thaliana HOM05D003048 ORTHO05D003418 1.6e-08 63.9 152 57.9
Nitab4.5_0001191g0030 Nicotiana tabacum HOM05D003048 ORTHO05D003418 1.6e-08 63.9 113 69.0
DCAR_018605 Daucus carota HOM05D003048 ORTHO05D003418 2.1e-08 63.5 56 50.0
Lsat_1_v5_gn_5_176360 Lactuca sativa HOM05D003048 ORTHO05D003418 2.1e-08 63.5 57 52.6
Peaxi162Scf00315g00048 Petunia axillaris HOM05D003048 ORTHO05D003418 2.1e-08 63.5 148 64.2
Aa31LG3G15000 Aethionema arabicum HOM05D003048 ORTHO05D003418 2.7e-08 63.2 56 50.0
PSO513G0110 Papaver somniferum HOM05D003048 ORTHO05D003418 2.7e-08 63.2 55 54.5
Ah.11g050720 Amaranthus hybridus HOM05D003048 ORTHO05D003418 3.5e-08 62.8 56 51.8
Nitab4.5_0001177g0050 Nicotiana tabacum HOM05D003048 ORTHO05D003418 3.5e-08 62.8 113 69.0
PGSC0003DMG401029009 Solanum tuberosum HOM05D003048 ORTHO05D003418 4.6e-08 62.4 56 48.2
Solyc09g020010.2 Solanum lycopersicum HOM05D003048 ORTHO05D003418 6.0e-08 62.0 56 50.0
Eucgr.K02351 Eucalyptus grandis HOM05D003048 ORTHO05D003418 7.8e-08 61.6 148 56.1
CAN.G1341.3 Capsicum annuum HOM05D003048 ORTHO05D003418 1.0e-07 61.2 56 48.2
CARHR193440 Cardamine hirsuta HOM05D003048 ORTHO05D003418 1.0e-07 61.2 149 58.4
SHI10214 Sapria himalayana HOM05D003048 ORTHO05D003418 1.3e-07 60.8 56 46.4
Dinv21500 Davidia involucrata HOM05D003048 ORTHO05D003418 1.7e-07 60.5 56 51.8
Nitab4.5_0001348g0120 Nicotiana tabacum HOM05D003048 ORTHO05D003418 1.7e-07 60.5 146 50.7
vmacro14678 Vaccinium macrocarpon HOM05D003048 ORTHO05D003418 1.7e-07 60.5 56 50.0
CSS0001461 Camellia sinensis var. sinensis HOM05D003048 ORTHO05D003418 2.3e-07 60.1 148 64.2
CSS0039406 Camellia sinensis var. sinensis HOM05D003048 ORTHO05D003418 2.3e-07 60.1 148 64.2
Hund09491 Selenicereus undatus HOM05D003048 ORTHO05D003418 2.3e-07 60.1 142 66.9
Atru.chr10.1042 Acer truncatum HOM05D003048 ORTHO05D003418 3.0e-07 59.7 150 44.7
Manes.15G125700 Manihot esculenta HOM05D003048 ORTHO05D003418 3.0e-07 59.7 56 50.0
PGR044G2296 Punica granatum HOM05D003048 ORTHO05D003418 3.0e-07 59.7 55 49.1
Solyc06g007660.2 Solanum lycopersicum HOM05D003048 ORTHO05D003418 3.0e-07 59.7 56 48.2
SGA_v2.0_scaffold95G28694 Striga asiatica HOM05D003048 ORTHO05D003418 3.0e-07 59.7 56 46.4
BcaNung06270 Brassica carinata HOM05D003048 ORTHO05D003418 3.9e-07 59.3 151 63.6
BolC9t59299H Brassica oleracea HOM05D003048 ORTHO05D003418 3.9e-07 59.3 151 63.6
Sopen06g002560 Solanum pennellii HOM05D003048 ORTHO05D003418 3.9e-07 59.3 112 69.6
Thecc.02G009700 Theobroma cacao HOM05D003048 ORTHO05D003418 3.9e-07 59.3 56 51.8
Nitab4.5_0004982g0030 Nicotiana tabacum HOM05D003048 ORTHO05D003418 5.1e-07 58.9 56 50.0
Lsat_1_v5_gn_8_98541 Lactuca sativa HOM05D003048 ORTHO05D003418 6.6e-07 58.5 171 53.8
Ciclev10017082m.g Citrus clementina HOM05D003048 ORTHO05D003418 1.1e-06 57.8 51 54.9
Gorai.004G060300 Gossypium raimondii HOM05D003048 ORTHO05D003418 1.1e-06 57.8 56 46.4
ATR0225G013 Amborella trichopoda HOM05D003048 ORTHO05D003418 1.5e-06 57.4 56 46.4
C09p56820 Brassica napus HOM05D003048 ORTHO05D003418 1.5e-06 57.4 55 47.3
BraA10t44094Z Brassica rapa HOM05D003048 ORTHO05D003418 1.5e-06 57.4 55 47.3
Gohir.D08G058400 Gossypium hirsutum HOM05D003048 ORTHO05D003418 1.5e-06 57.4 56 46.4
A10p20230 Brassica napus HOM05D003048 ORTHO05D003418 1.9e-06 57.0 55 47.3
Sp6g24930 Schrenkiella parvula HOM05D003048 ORTHO05D003418 1.9e-06 57.0 56 46.4
COL.COLO4_17660 Corchorus olitorius HOM05D003048 ORTHO05D003418 3.3e-06 56.2 56 48.2
Gohir.A08G048300 Gossypium hirsutum HOM05D003048 ORTHO05D003418 3.3e-06 56.2 56 46.4
unitig_0.g424 Utricularia gibba HOM05D003048 ORTHO05D003418 3.3e-06 56.2 56 44.6
RcHm_v2.0_Chr5g0015061 Rosa chinensis HOM05D003048 ORTHO05D003418 4.3e-06 55.8 56 50.0
CAN.G874.43 Capsicum annuum HOM05D003048 ORTHO05D003418 5.6e-06 55.5 113 66.4
C09p64660 Brassica napus HOM05D003048 ORTHO05D003418 7.3e-06 55.1 150 63.3
Migut.C01131 Erythranthe guttata HOM05D003048 ORTHO05D003418 7.3e-06 55.1 56 48.2
AUR62028631 Chenopodium quinoa HOM05D003048 ORTHO05D003418 9.6e-06 54.7 160 42.5


User provided reference genes

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