Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 2.4e-156 556.6 622 100.0
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 9.2e-156 554.7 622 99.7
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 1.1e-87 328.6 624 80.0
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 5.7e-73 279.6 616 69.2
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.3e-72 278.5 423 75.7
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 1.4e-68 265.0 617 77.1
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 5.7e-65 253.1 631 73.2
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 8.2e-64 249.2 626 64.5
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 2.6e-62 244.2 627 74.3
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 2.6e-62 244.2 620 76.5
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 3.2e-60 237.3 623 72.9
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 4.2e-60 236.9 602 74.8
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.5e-60 236.5 622 74.0
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.5e-60 236.5 622 74.0
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 1.2e-59 235.3 622 73.5
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 1.6e-59 235.0 622 74.1
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 1.0e-58 232.3 639 73.7
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 8.8e-58 229.2 617 72.8
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 8.8e-58 229.2 633 72.4
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 3.3e-57 227.3 630 71.0
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 5.7e-57 226.5 625 73.6
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 9.7e-57 225.7 568 78.5
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 1.3e-56 225.3 622 72.3
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 1.4e-55 221.9 625 71.7
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 2.4e-55 221.1 626 71.9
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 3.1e-55 220.7 627 74.3
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 1.2e-54 218.8 626 71.4
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 1.6e-54 218.4 623 74.3
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 2.7e-54 217.6 627 72.6
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 7.7e-54 216.1 627 72.4
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 1.3e-53 215.3 583 75.6
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 2.2e-53 214.5 625 70.9
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.2e-53 214.5 622 70.6
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 2.2e-53 214.5 607 73.0
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 2.9e-53 214.2 627 71.0
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 6.5e-53 213.0 625 70.4
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 2.5e-52 211.1 631 69.7
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 7.2e-52 209.5 628 53.5
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 7.2e-52 209.5 647 69.1
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 9.4e-52 209.1 624 70.4
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 3.6e-51 207.2 622 72.5
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 4.7e-51 206.8 573 77.8
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 1.0e-50 205.7 625 70.6
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 4.0e-50 203.8 606 62.9
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 4.4e-49 200.3 622 71.7
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 9.8e-49 199.1 574 75.3
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 9.8e-49 199.1 246 52.4
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.3e-48 198.7 633 68.6
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 4.8e-48 196.8 609 71.6
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 4.8e-48 196.8 626 73.0
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 1.4e-47 195.3 417 65.7
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 2.4e-47 194.5 561 75.2
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 5.4e-47 193.4 246 49.2
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 7.0e-47 193.0 570 74.2
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 7.0e-47 193.0 624 72.6
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 1.6e-46 191.8 253 47.8
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 4.5e-46 190.3 570 73.9
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 1.0e-45 189.1 246 48.0
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.0e-45 189.1 246 48.0
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 2.9e-45 187.6 247 47.8
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 3.8e-45 187.2 247 47.8
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 5.0e-45 186.8 628 71.2
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 5.0e-45 186.8 247 48.6
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 2.5e-44 184.5 247 47.8
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 3.3e-44 184.1 247 48.6
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 4.2e-44 183.7 247 47.8
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 7.2e-44 183.0 181 58.6
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 7.2e-44 183.0 181 58.6
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 9.5e-44 182.6 248 48.8
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 9.5e-44 182.6 629 68.8
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 1.6e-43 181.8 250 48.4
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 1.6e-43 181.8 250 48.4
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 2.1e-43 181.4 181 58.6
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 3.6e-43 180.6 202 54.0
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 3.6e-43 180.6 202 54.0
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 1.0e-42 179.1 248 50.4
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 1.0e-42 179.1 248 50.4
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 1.0e-42 179.1 248 50.4
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 1.4e-42 178.7 174 56.9
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 1.4e-42 178.7 625 70.4
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 1.8e-42 178.3 200 52.5
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 2.3e-42 177.9 508 82.7
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 3.0e-42 177.6 246 50.0
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 3.0e-42 177.6 247 46.2
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 9.8e-41 172.6 197 49.2
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 3.7e-40 170.6 222 49.1
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 4.9e-40 170.2 186 54.3
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 6.3e-40 169.9 265 44.2
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 1.1e-39 169.1 587 71.6
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 3.1e-39 167.5 622 70.7
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 9.2e-39 166.0 578 70.8
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 1.6e-38 165.2 552 73.6
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 2.0e-38 164.9 247 44.9
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 7.8e-38 162.9 194 52.1
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 5.0e-37 160.2 277 44.4
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 2.5e-36 157.9 673 64.8
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 5.6e-36 156.8 168 53.0
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 2.8e-35 154.5 223 44.8
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 3.6e-35 154.1 225 41.3
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 4.7e-35 153.7 572 71.9
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 8.0e-35 152.9 474 84.2
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 2.0e-33 148.3 235 44.7
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 9.8e-33 146.0 228 44.7
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 4.9e-32 143.7 235 43.4
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.7e-30 137.9 195 47.2
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.7e-30 137.9 195 47.2
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 6.6e-29 133.3 204 45.1
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 4.7e-27 127.1 121 57.0
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 1.1e-26 125.9 130 53.1
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 1.5e-25 122.1 131 56.5
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 6.6e-21 106.7 131 50.4
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.1e-20 105.9 226 91.6
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 2.3e-18 98.2 253 34.4
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 2.9e-16 91.3 217 37.8
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 3.7e-16 90.9 567 67.7
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 4.9e-16 90.5 244 86.5
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 4.9e-16 90.5 244 86.5
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 6.4e-16 90.1 243 82.3
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 3.0e-13 81.3 61 62.3
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 8.6e-13 79.7 377 58.9
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 3.3e-12 77.8 244 84.0
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 1.8e-10 72.0 242 83.9
CBR_g61650 Chara braunii HOM05D006250 ORTHO05D007107 1.5e-09 68.9 245 78.8
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 1.5e-09 68.9 233 80.3
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 3.4e-09 67.8 224 33.0


User provided reference genes

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