Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 8.7e-85 317.0 169 100.0
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 1.4e-45 186.8 169 67.5
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 2.0e-41 172.9 172 57.0
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 1.1e-39 167.2 104 80.8
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 1.1e-39 167.2 104 80.8
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 7.2e-39 164.5 167 59.9
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 1.6e-38 163.3 169 57.4
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 2.8e-38 162.5 92 88.0
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 2.8e-38 162.5 108 79.6
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 3.6e-38 162.2 108 79.6
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 4.7e-38 161.8 186 55.9
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 6.1e-38 161.4 168 57.1
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 6.1e-38 161.4 102 79.4
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 8.0e-38 161.0 107 78.5
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 8.0e-38 161.0 113 72.6
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.4e-37 160.2 134 64.9
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 1.4e-37 160.2 99 77.8
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 1.8e-37 159.8 104 79.8
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 2.3e-37 159.5 165 57.6
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 2.3e-37 159.5 127 68.5
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 2.3e-37 159.5 127 68.5
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 3.0e-37 159.1 136 63.2
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 4.0e-37 158.7 101 80.2
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 4.0e-37 158.7 106 75.5
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 5.2e-37 158.3 104 78.8
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 6.8e-37 157.9 100 79.0
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 6.8e-37 157.9 100 80.0
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 8.9e-37 157.5 173 56.1
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 1.2e-36 157.1 168 55.4
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.5e-36 156.8 167 55.7
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 2.0e-36 156.4 176 52.3
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 2.6e-36 156.0 106 73.6
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 3.4e-36 155.6 157 58.0
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 3.4e-36 155.6 177 55.9
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 4.4e-36 155.2 105 75.2
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 4.4e-36 155.2 105 73.3
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 7.5e-36 154.5 102 79.4
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 7.5e-36 154.5 165 55.8
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 9.8e-36 154.1 97 82.5
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 9.8e-36 154.1 159 59.1
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.7e-35 153.3 179 53.1
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 2.2e-35 152.9 178 56.2
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 2.8e-35 152.5 179 53.1
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 2.8e-35 152.5 104 75.0
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 4.9e-35 151.8 169 55.6
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 6.3e-35 151.4 91 84.6
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 6.3e-35 151.4 127 65.4
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 1.1e-34 150.6 91 83.5
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 1.1e-34 150.6 168 54.2
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.4e-34 150.2 177 50.8
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 1.4e-34 150.2 98 80.6
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 1.4e-34 150.2 165 53.3
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 1.8e-34 149.8 161 56.5
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 1.8e-34 149.8 150 58.0
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 2.4e-34 149.4 173 52.0
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 4.1e-34 148.7 169 58.0
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 5.4e-34 148.3 114 68.4
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 5.4e-34 148.3 92 79.3
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 7.0e-34 147.9 105 73.3
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 1.6e-33 146.7 115 70.4
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 4.5e-33 145.2 109 70.6
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 7.8e-33 144.4 99 74.7
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 7.8e-33 144.4 99 73.7
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 1.3e-32 143.7 88 81.8
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.7e-32 143.3 89 79.8
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 1.7e-32 143.3 91 79.1
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 1.7e-32 143.3 92 77.2
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 2.3e-32 142.9 148 53.4
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 2.9e-32 142.5 96 72.9
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 3.9e-32 142.1 164 53.7
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 3.9e-32 142.1 97 74.2
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 5.0e-32 141.7 87 80.5
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 8.6e-32 141.0 99 75.8
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 1.5e-31 140.2 96 71.9
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 1.9e-31 139.8 96 72.9
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 1.9e-31 139.8 96 72.9
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 1.9e-31 139.8 96 72.9
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 1.9e-31 139.8 96 72.9
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 1.9e-31 139.8 96 72.9
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 2.5e-31 139.4 96 71.9
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 2.5e-31 139.4 103 69.9
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 3.3e-31 139.0 168 53.6
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 5.6e-31 138.3 185 53.0
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 7.3e-31 137.9 176 51.7
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 9.5e-31 137.5 88 77.3
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 2.1e-30 136.3 94 70.2
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 2.1e-30 136.3 185 50.3
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 2.1e-30 136.3 169 52.7
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 2.1e-30 136.3 95 72.6
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 2.8e-30 136.0 176 51.1
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 3.6e-30 135.6 162 51.2
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 3.6e-30 135.6 215 44.7
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 4.7e-30 135.2 77 88.3
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 6.1e-30 134.8 179 52.0
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 6.1e-30 134.8 179 50.3
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 2.3e-29 132.9 169 50.3
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 8.9e-29 131.0 96 68.8
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 1.5e-28 130.2 98 66.3
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 7.5e-28 127.9 92 68.5
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 2.2e-27 126.3 126 57.1
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 3.7e-27 125.6 77 81.8
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 1.1e-26 124.0 95 68.4
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.9e-26 123.2 78 80.8
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 2.4e-26 122.9 74 81.1
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 2.5e-23 112.8 166 45.8
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 1.1e-21 107.5 139 48.2
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 3.1e-21 105.9 85 60.0
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 5.2e-21 105.1 90 61.1
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 3.0e-16 89.4 79 49.4
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 5.1e-16 88.6 50 88.0
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 1.1e-15 87.4 99 51.5
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.5e-15 87.0 177 36.2
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.5e-15 87.0 177 36.2
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 2.5e-15 86.3 49 81.6
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 2.5e-15 86.3 106 50.0
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.4e-10 70.5 44 77.3
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 3.0e-08 62.8 102 45.1
AT5G17560 Arabidopsis thaliana HOM05D006461 ORTHO05D008199 7.3e-07 58.2 47 59.6
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 9.5e-07 57.8 61 52.5
Mapoly0051s0029 Marchantia polymorpha HOM05D002854 ORTHO05D003051 9.5e-07 57.8 100 40.0
AL3G12680 Arabidopsis lyrata HOM05D000403 ORTHO05D000350 1.6e-06 57.0 50 62.0
AL3G12640 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 4.7e-06 55.5 37 75.7


User provided reference genes

Program Settings