Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2731 Papaver somniferum HOM05D005042 ORTHO05D006080 4.1e-312 1073.9 600 100.0
PSO782G3512 Papaver somniferum HOM05D005042 ORTHO05D006080 3.8e-300 1034.2 601 97.3
Nn4g23527 Nelumbo nucifera HOM05D005042 ORTHO05D006080 9.4e-57 225.7 686 35.6
Aqoxy3G03731 Aquilegia oxysepala HOM05D005042 ORTHO05D006080 2.3e-55 221.1 782 32.7
MBI16_g07040_MAGBIO Magnolia biondii HOM05D005042 ORTHO05D006080 9.7e-54 215.7 635 37.3
TAR629G0517 Trochodendron aralioides HOM05D005042 ORTHO05D006080 8.2e-53 212.6 715 35.8
Dinv34024 Davidia involucrata HOM05D005042 ORTHO05D006080 2.4e-52 211.1 715 33.3
Haze_11871 Corylus avellana HOM05D005042 ORTHO05D006080 7.2e-49 199.5 730 32.3
Cfa008851 Carpinus fangiana HOM05D005042 ORTHO05D006080 1.8e-47 194.9 738 30.2
Lj3A1027T86 Lonicera japonica HOM05D005042 ORTHO05D006080 8.8e-47 192.6 699 30.9
PSO017G3437 Papaver somniferum HOM05D005042 ORTHO05D006080 3.4e-46 190.7 607 32.3
MD13G1056900 Malus domestica HOM05D005042 ORTHO05D006080 4.8e-45 186.8 660 36.7
Cpa.g.sc1.165 Carica papaya HOM05D005042 ORTHO05D006080 8.3e-45 186.0 661 30.7
TWI79G1206 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 8.3e-45 186.0 684 34.2
Duzib251G0840 Durio zibethinus HOM05D005042 ORTHO05D006080 1.4e-44 185.3 638 35.6
Potri.008G109100 Populus trichocarpa HOM05D005042 ORTHO05D006080 3.1e-44 184.1 709 29.5
Potri.T155180 Populus trichocarpa HOM05D005042 ORTHO05D006080 3.1e-44 184.1 709 29.5
Prupe.1G292900 Prunus persica HOM05D005042 ORTHO05D006080 7.0e-44 183.0 671 34.4
MD16G1056300 Malus domestica HOM05D005042 ORTHO05D006080 9.1e-44 182.6 667 35.1
TAR726G0003 Trochodendron aralioides HOM05D005042 ORTHO05D006080 1.2e-43 182.2 681 29.5
CiPaw.06G094600 Carya illinoinensis HOM05D005042 ORTHO05D006080 3.5e-43 180.6 660 30.8
Hund25158 Selenicereus undatus HOM05D005042 ORTHO05D006080 7.7e-43 179.5 615 30.9
Cc11_g11610 Coffea canephora HOM05D005042 ORTHO05D006080 1.7e-42 178.3 626 29.9
Sabra08G0082800 Salix brachista HOM05D005042 ORTHO05D006080 5.0e-42 176.8 709 33.1
HPP92_000883 Vanilla planifolia HOM05D005042 ORTHO05D006080 5.0e-42 176.8 632 33.5
Thecc.02G323700 Theobroma cacao HOM05D005042 ORTHO05D006080 6.5e-42 176.4 643 33.6
CiPaw.05G122400 Carya illinoinensis HOM05D005042 ORTHO05D006080 1.1e-41 175.6 720 28.2
TWI31G0262 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 1.5e-41 175.3 670 33.1
PSO478G2238 Papaver somniferum HOM05D005042 ORTHO05D006080 4.7e-40 170.2 604 30.1
Eucgr.G02425 Eucalyptus grandis HOM05D005042 ORTHO05D006080 8.0e-40 169.5 593 30.2
Potri.010G139100 Populus trichocarpa HOM05D005042 ORTHO05D006080 8.0e-40 169.5 731 28.9
Gohir.D05G307200 Gossypium hirsutum HOM05D005042 ORTHO05D006080 2.3e-39 167.9 623 34.5
Manes.01G025000 Manihot esculenta HOM05D005042 ORTHO05D006080 3.0e-39 167.5 675 28.6
Oeu057419.1 Olea europaea HOM05D005042 ORTHO05D006080 3.0e-39 167.5 652 32.7
CSS0000751 Camellia sinensis var. sinensis HOM05D005042 ORTHO05D006080 8.8e-39 166.0 720 31.8
Gorai.009G327100 Gossypium raimondii HOM05D005042 ORTHO05D006080 8.8e-39 166.0 618 34.5
Atru.chr11.1578 Acer truncatum HOM05D005042 ORTHO05D006080 2.0e-38 164.9 721 31.3
EL10Ac6g14684 Beta vulgaris HOM05D005042 ORTHO05D006080 2.6e-38 164.5 606 29.5
Gohir.A05G306900 Gossypium hirsutum HOM05D005042 ORTHO05D006080 2.6e-38 164.5 625 35.2
Rhsim12G0071400 Rhododendron simsii HOM05D005042 ORTHO05D006080 2.6e-38 164.5 606 31.2
SGA_v2.0_scaffold287G47187 Striga asiatica HOM05D005042 ORTHO05D006080 7.5e-38 162.9 645 29.5
TAR371G1247 Trochodendron aralioides HOM05D005042 ORTHO05D006080 1.7e-37 161.8 269 40.5
vmacro01299 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 1.4e-36 158.7 644 30.9
Actinidia07770 Actinidia chinensis HOM05D005042 ORTHO05D006080 5.4e-36 156.8 681 28.2
PGR119G2532 Punica granatum HOM05D005042 ORTHO05D006080 7.0e-36 156.4 675 32.1
Migut.E00252 Erythranthe guttata HOM05D005042 ORTHO05D006080 9.1e-36 156.0 598 27.9
Ciclev10030834m.g Citrus clementina HOM05D005042 ORTHO05D006080 2.9e-34 151.0 719 33.1
Glyma.02G122200 Glycine max HOM05D005042 ORTHO05D006080 1.5e-33 148.7 610 33.6
Oeu024162.6 Olea europaea HOM05D005042 ORTHO05D006080 1.5e-33 148.7 649 27.6
RcHm_v2.0_Chr4g0437421 Rosa chinensis HOM05D005042 ORTHO05D006080 2.5e-33 147.9 710 34.5
CDE10G0431 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 9.5e-33 146.0 586 29.7
FAN22G1919 Fragaria x ananassa HOM05D005042 ORTHO05D006080 2.8e-32 144.4 662 35.6
Lalb_Chr17g0341431 Lupinus albus HOM05D005042 ORTHO05D006080 3.6e-32 144.1 633 28.6
FAN17G2893 Fragaria x ananassa HOM05D005042 ORTHO05D006080 8.0e-32 142.9 664 36.0
Nitab4.5_0012072g0010 Nicotiana tabacum HOM05D005042 ORTHO05D006080 1.8e-31 141.7 682 30.8
THA.LOC104821992 Tarenaya hassleriana HOM05D005042 ORTHO05D006080 1.8e-31 141.7 597 31.3
ATR0827G068 Amborella trichopoda HOM05D005042 ORTHO05D006080 3.0e-31 141.0 616 29.4
Peaxi162Scf00188g01341 Petunia axillaris HOM05D005042 ORTHO05D006080 3.0e-31 141.0 625 32.8
CAN.G1021.3 Capsicum annuum HOM05D005042 ORTHO05D006080 1.5e-30 138.7 622 32.2
GSVIVG01012257001 Vitis vinifera HOM05D005042 ORTHO05D006080 2.0e-30 138.3 620 35.6
Aa31LG4G11790 Aethionema arabicum HOM05D005042 ORTHO05D006080 4.4e-30 137.1 621 31.1
CANSAT11G1456 Cannabis sativa HOM05D005042 ORTHO05D006080 5.7e-30 136.7 515 29.7
Ah.03g138660 Amaranthus hybridus HOM05D000485 ORTHO05D000341 9.8e-30 136.0 489 35.4
Phvul.003G038600 Phaseolus vulgaris HOM05D005042 ORTHO05D006080 9.8e-30 136.0 617 28.7
AUR62007879 Chenopodium quinoa HOM05D005042 ORTHO05D006080 1.7e-29 135.2 464 31.9
arahy.Tifrunner.gnm1.ann1.U4ZHW1 Arachis hypogaea HOM05D005042 ORTHO05D006080 2.2e-29 134.8 631 31.2
Oeu021807.1 Olea europaea HOM05D005042 ORTHO05D006080 8.3e-29 132.9 593 31.2
Nitab4.5_0000027g0180 Nicotiana tabacum HOM05D005042 ORTHO05D006080 1.4e-28 132.1 688 30.1
Sc04g0007390 Simmondsia chinensis HOM05D005042 ORTHO05D006080 1.4e-28 132.1 599 33.7
AUR62003064 Chenopodium quinoa HOM05D005042 ORTHO05D006080 1.8e-28 131.7 540 30.0
PGSC0003DMG400028304 Solanum tuberosum HOM05D005042 ORTHO05D006080 1.8e-28 131.7 611 31.9
FvH4_4g29350 Fragaria vesca HOM05D005042 ORTHO05D006080 2.4e-28 131.3 661 35.7
Thhalv10018302m.g Eutrema salsugineum HOM05D005042 ORTHO05D006080 3.2e-28 131.0 629 32.9
Oeu055079.1 Olea europaea HOM05D005042 ORTHO05D006080 4.1e-28 130.6 175 48.0
ECA246G3902 Erigeron canadensis HOM05D005042 ORTHO05D006080 1.2e-27 129.0 575 30.1
FAN07G1705 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.2e-27 129.0 663 33.9
Glyma.01G064400 Glycine max HOM05D005042 ORTHO05D006080 2.0e-27 128.3 612 34.8
Lj2g0019338 Lotus japonicus HOM05D005042 ORTHO05D006080 2.7e-27 127.9 189 48.1
QL05p008217 Quercus lobata HOM05D005042 ORTHO05D006080 7.8e-27 126.3 270 36.7
AT1G69060 Arabidopsis thaliana HOM05D005042 ORTHO05D006080 1.3e-26 125.6 616 31.3
HanXRQChr17g0570091 Helianthus annuus HOM05D005042 ORTHO05D006080 2.3e-26 124.8 577 26.9
Sp5g24160 Schrenkiella parvula HOM05D005042 ORTHO05D006080 2.9e-26 124.4 591 30.8
COL.COLO4_27818 Corchorus olitorius HOM05D005042 ORTHO05D006080 3.9e-26 124.0 638 27.7
Solyc05g011930.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.5e-25 122.1 641 31.4
Medtr5g047140 Medicago truncatula HOM05D005042 ORTHO05D006080 2.5e-25 121.3 189 45.5
Ca_05058_v3 Cicer arietinum L. HOM05D005042 ORTHO05D006080 4.3e-25 120.6 611 27.2
Sopen05g006670 Solanum pennellii HOM05D005042 ORTHO05D006080 9.5e-25 119.4 617 31.4
MELO3C011406.2 Cucumis melo HOM05D005042 ORTHO05D006080 1.2e-24 119.0 564 26.1
Rhsim09G0122700 Rhododendron simsii HOM05D005042 ORTHO05D006080 1.6e-24 118.6 763 26.1
Lalb_Chr10g0099121 Lupinus albus HOM05D005042 ORTHO05D006080 2.1e-24 118.2 611 31.4
Psat2g093520 Pisum sativum HOM05D005042 ORTHO05D006080 6.1e-24 116.7 204 45.1
CsaV3_6G033840 Cucumis sativus L. HOM05D005042 ORTHO05D006080 8.0e-24 116.3 564 25.7
unitig_62.g23700 Utricularia gibba HOM05D005042 ORTHO05D006080 1.4e-23 115.5 169 43.8
SEGI_40784 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 1.8e-23 115.2 449 25.8
Carub.0002s1568 Capsella rubella HOM05D005042 ORTHO05D006080 3.1e-23 114.4 578 29.9
CDE10G0071 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 3.1e-23 114.4 492 28.0
COL.COLO4_27836 Corchorus olitorius HOM05D005042 ORTHO05D006080 5.2e-23 113.6 167 44.9
Solyc05g011950.3 Solanum lycopersicum HOM05D005042 ORTHO05D006080 5.2e-23 113.6 163 44.8
Dinv15584 Davidia involucrata HOM05D000485 ORTHO05D000341 6.8e-23 113.2 540 27.8
SEGI_37091 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 6.8e-23 113.2 167 46.1
arahy.Tifrunner.gnm1.ann1.L0BNS4 Arachis hypogaea HOM05D005042 ORTHO05D006080 8.9e-23 112.8 93 63.4
CARHR061940 Cardamine hirsuta HOM05D005042 ORTHO05D006080 1.5e-22 112.1 157 59.2
Lsat_1_v5_gn_3_106381 Lactuca sativa HOM05D005042 ORTHO05D006080 2.6e-22 111.3 578 27.3
FAN12G1549 Fragaria x ananassa HOM05D005042 ORTHO05D006080 5.8e-22 110.2 658 33.9
DCAR_007205 Daucus carota HOM05D005042 ORTHO05D006080 7.5e-22 109.8 582 32.6
VMungo1215G3453 Vigna mungo HOM05D005042 ORTHO05D006080 1.7e-21 108.6 93 60.2
CAN.G1021.18 Capsicum annuum HOM05D005042 ORTHO05D006080 2.2e-21 108.2 94 60.6
Os03g0752700 Oryza sativa ssp. japonica HOM05D005042 ORTHO05D006080 2.2e-21 108.2 618 32.2
C06p40780 Brassica napus HOM05D005042 ORTHO05D006080 2.9e-21 107.8 674 31.0
TPR.G34179 Trifolium pratense HOM05D005042 ORTHO05D006080 2.9e-21 107.8 167 45.5
vmacro10479 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 3.7e-21 107.5 739 26.4
AL2G28110 Arabidopsis lyrata HOM05D005042 ORTHO05D006080 6.4e-21 106.7 628 30.4
CAN.G1021.10 Capsicum annuum HOM05D005042 ORTHO05D006080 6.4e-21 106.7 168 42.3
CAN.G1021.20 Capsicum annuum HOM05D005042 ORTHO05D006080 1.4e-20 105.5 88 63.6
PGSC0003DMG400028305 Solanum tuberosum HOM05D005042 ORTHO05D006080 5.4e-20 103.6 88 65.9
ClCG08G010560 Citrullus lanatus HOM05D005042 ORTHO05D006080 1.2e-19 102.4 600 24.8
CAN.G1021.19 Capsicum annuum HOM05D005042 ORTHO05D006080 2.7e-19 101.3 94 58.5
CAN.G1021.24 Capsicum annuum HOM05D005042 ORTHO05D006080 2.7e-19 101.3 94 58.5
Solyc05g011960.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 2.7e-19 101.3 88 63.6
ECA234G0547 Erigeron canadensis HOM05D005042 ORTHO05D006080 6.0e-19 100.1 201 46.8
Sabra10G0107300 Salix brachista HOM05D005042 ORTHO05D006080 1.0e-18 99.4 679 23.9
TPR.G37754 Trifolium pratense HOM05D005042 ORTHO05D006080 1.0e-18 99.4 167 37.1
AagrBONN_evm.TU.Sc2ySwM_117.2775 Anthoceros agrestis HOM05D005042 ORTHO05D006080 1.7e-18 98.6 182 37.4
DCAR_023741 Daucus carota HOM05D005042 ORTHO05D006080 1.7e-18 98.6 91 59.3
Sopen05g006700 Solanum pennellii HOM05D005042 ORTHO05D006080 1.7e-18 98.6 88 61.4
BolC6t39355H Brassica oleracea HOM05D005042 ORTHO05D006080 2.3e-18 98.2 671 30.3
Dinv15585 Davidia involucrata HOM05D005042 ORTHO05D006080 6.6e-18 96.7 66 74.2
Pp3c2_29040 Physcomitrium patens HOM05D005042 ORTHO05D006080 3.3e-17 94.4 168 42.9
DCAR_030054 Daucus carota HOM05D005042 ORTHO05D006080 4.3e-17 94.0 172 50.6
Nn3g17525 Nelumbo nucifera HOM05D005042 ORTHO05D006080 9.5e-17 92.8 674 24.2
Pp3c1_680 Physcomitrium patens HOM05D005042 ORTHO05D006080 1.2e-16 92.4 193 33.2
Mapoly0211s0012 Marchantia polymorpha HOM05D005042 ORTHO05D006080 2.1e-16 91.7 198 42.9
HanXRQChr16g0527171 Helianthus annuus HOM05D005042 ORTHO05D006080 6.2e-16 90.1 170 50.6
A07p35450 Brassica napus HOM05D005042 ORTHO05D006080 6.8e-15 86.7 652 29.4
Sopen05g006680 Solanum pennellii HOM05D000061 ORTHO05D000050 8.9e-15 86.3 149 40.3
Zm00001eb057530 Zea mays HOM05D005042 ORTHO05D006080 1.5e-14 85.5 552 30.3
CBR_g19648 Chara braunii HOM05D005042 ORTHO05D006080 2.0e-14 85.1 88 53.4
Manes.14G088800 Manihot esculenta HOM05D005042 ORTHO05D006080 4.4e-14 84.0 218 34.4
Lsat_1_v5_gn_4_25561 Lactuca sativa HOM05D005042 ORTHO05D006080 5.8e-14 83.6 91 50.5
TAR371G1032 Trochodendron aralioides HOM05D005042 ORTHO05D006080 7.5e-14 83.2 422 27.5
arahy.Tifrunner.gnm1.ann1.6TZ00L Arachis hypogaea HOM05D005042 ORTHO05D006080 2.1e-11 75.1 495 26.5
TPR.G38503 Trifolium pratense HOM05D005042 ORTHO05D006080 2.1e-11 75.1 579 24.7
BraA07t31136Z Brassica rapa HOM05D005042 ORTHO05D006080 6.0e-11 73.6 639 28.5
Sed0017498 Sechium edule HOM05D005042 ORTHO05D006080 5.8e-06 57.0 260 28.1


User provided reference genes

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