Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 2.6e-71 271.9 135 100.0
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 5.0e-67 257.7 135 95.6
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.4e-37 159.8 125 64.8
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.4e-37 159.1 119 68.1
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 1.2e-36 156.8 128 66.4
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 4.6e-36 154.8 141 61.0
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 6.0e-36 154.5 93 78.5
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 6.0e-36 154.5 96 79.2
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 7.8e-36 154.1 139 59.7
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 1.3e-35 153.3 106 69.8
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 2.3e-35 152.5 126 61.1
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 2.3e-35 152.5 96 76.0
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 3.0e-35 152.1 137 61.3
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 3.0e-35 152.1 96 78.1
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 3.9e-35 151.8 106 68.9
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 3.9e-35 151.8 97 75.3
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 3.9e-35 151.8 136 59.6
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 5.1e-35 151.4 96 75.0
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 6.6e-35 151.0 103 70.9
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 8.6e-35 150.6 92 77.2
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 1.1e-34 150.2 94 76.6
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 1.1e-34 150.2 96 77.1
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 1.5e-34 149.8 106 69.8
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 1.5e-34 149.8 135 57.8
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 1.5e-34 149.8 83 81.9
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 1.9e-34 149.4 125 63.2
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.9e-34 149.4 136 58.8
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 3.3e-34 148.7 98 74.5
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 3.3e-34 148.7 98 74.5
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 4.3e-34 148.3 95 75.8
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 4.3e-34 148.3 113 65.5
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 4.3e-34 148.3 98 74.5
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 5.6e-34 147.9 104 70.2
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 7.3e-34 147.5 98 74.5
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 7.3e-34 147.5 107 66.4
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 7.3e-34 147.5 106 67.9
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 7.3e-34 147.5 97 77.3
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 9.6e-34 147.1 96 72.9
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 9.6e-34 147.1 94 72.3
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 9.6e-34 147.1 96 72.9
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 9.6e-34 147.1 95 75.8
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 9.6e-34 147.1 96 72.9
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 9.6e-34 147.1 105 69.5
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.2e-33 146.7 126 62.7
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 1.2e-33 146.7 106 69.8
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.2e-33 146.7 116 62.9
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 2.1e-33 146.0 82 81.7
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 2.1e-33 146.0 96 71.9
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 2.8e-33 145.6 132 60.6
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 2.8e-33 145.6 132 60.6
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 2.8e-33 145.6 96 75.0
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 2.8e-33 145.6 106 69.8
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 2.8e-33 145.6 87 78.2
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 3.6e-33 145.2 95 73.7
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 4.7e-33 144.8 87 78.2
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 4.7e-33 144.8 96 74.0
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 4.7e-33 144.8 96 74.0
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 4.7e-33 144.8 82 80.5
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 4.7e-33 144.8 96 74.0
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 6.2e-33 144.4 132 55.3
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 8.1e-33 144.1 87 78.2
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.1e-32 143.7 111 64.0
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.1e-32 143.7 104 68.3
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 1.1e-32 143.7 138 56.5
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.1e-32 143.7 86 79.1
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 1.4e-32 143.3 93 73.1
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 1.8e-32 142.9 104 69.2
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 1.8e-32 142.9 134 57.5
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 1.8e-32 142.9 93 74.2
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 1.8e-32 142.9 113 64.6
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 2.4e-32 142.5 106 66.0
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 2.4e-32 142.5 94 72.3
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 2.4e-32 142.5 131 56.5
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 2.4e-32 142.5 94 72.3
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 3.1e-32 142.1 128 58.6
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 3.1e-32 142.1 138 56.5
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 3.1e-32 142.1 137 55.5
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 3.1e-32 142.1 84 78.6
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 3.1e-32 142.1 132 54.5
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 4.0e-32 141.7 93 71.0
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 4.0e-32 141.7 111 64.0
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.0e-32 141.7 95 70.5
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.0e-32 141.7 111 64.0
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 4.0e-32 141.7 98 68.4
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 4.0e-32 141.7 114 61.4
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 6.9e-32 141.0 111 64.0
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 8.9e-32 140.6 133 57.9
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 1.2e-31 140.2 130 59.2
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 5.8e-31 137.9 109 64.2
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 5.8e-31 137.9 84 72.6
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 5.8e-31 137.9 84 76.2
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 1.3e-30 136.7 95 70.5
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 1.7e-30 136.3 94 69.1
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 2.9e-30 135.6 92 70.7
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 2.9e-30 135.6 83 77.1
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 3.8e-30 135.2 86 74.4
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 4.9e-30 134.8 95 69.5
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 1.9e-29 132.9 82 73.2
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 2.4e-29 132.5 92 69.6
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 6.6e-27 124.4 87 69.0
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 7.3e-26 120.9 118 55.1
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.3e-25 120.2 97 61.9
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 3.0e-19 99.0 129 48.8
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 4.8e-17 91.7 84 54.8
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 3.4e-15 85.5 46 82.6
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 1.6e-09 66.6 47 70.2
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 1.7e-06 56.6 39 66.7


User provided reference genes

Program Settings