Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 2.0e-250 868.6 438 100.0
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 9.4e-240 833.2 438 96.1
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 4.2e-155 552.0 436 70.4
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 1.3e-151 540.4 419 71.1
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 1.8e-134 483.4 388 69.8
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 1.0e-124 451.1 388 67.0
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 1.6e-114 417.2 435 57.9
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 5.7e-112 408.7 426 57.0
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 3.5e-101 372.9 281 69.0
PSO081G0156 Papaver somniferum HOM05D004787 ORTHO05D304832 2.0e-85 320.5 181 91.7
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 1.9e-75 287.3 400 47.8
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 6.4e-71 272.3 274 56.9
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 1.2e-64 251.5 433 44.3
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 3.6e-58 229.9 128 91.4
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 3.9e-52 209.9 144 77.8
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-48 198.4 438 37.9
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 2.4e-46 190.7 362 41.7
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 7.9e-45 185.7 326 43.6
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 2.5e-43 180.6 125 74.4
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-41 175.3 202 52.5
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-40 171.4 245 46.1
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 2.1e-37 161.0 200 51.0
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 7.9e-37 159.1 200 50.5
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 1.3e-36 158.3 239 43.9
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 1.0e-28 132.1 68 95.6
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 1.0e-28 132.1 68 95.6
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 1.8e-25 121.3 397 32.7
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 1.5e-24 118.2 420 31.4
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 2.0e-24 117.9 419 31.5
PSO759G0004 Papaver somniferum HOM05D004787 ORTHO05D302987 3.4e-24 117.1 72 77.8
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 4.5e-24 116.7 399 30.8
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 5.9e-24 116.3 397 32.5
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 7.7e-24 115.9 397 32.5
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 1.7e-23 114.8 419 31.7
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 2.9e-23 114.0 424 29.2
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 2.9e-23 114.0 418 30.9
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 3.8e-23 113.6 334 32.9
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 5.0e-23 113.2 418 30.9
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 5.0e-23 113.2 418 30.9
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 5.0e-23 113.2 397 31.0
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 8.5e-23 112.5 396 31.3
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 8.5e-23 112.5 402 29.9
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 1.1e-22 112.1 435 29.9
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 1.1e-22 112.1 435 29.7
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.1e-22 112.1 418 30.6
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 1.1e-22 112.1 396 30.3
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 1.4e-22 111.7 445 29.0
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 1.4e-22 111.7 396 30.3
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 2.5e-22 110.9 430 30.5
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 4.2e-22 110.2 396 29.5
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 7.2e-22 109.4 423 30.0
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 1.2e-21 108.6 397 29.5
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 1.6e-21 108.2 393 30.8
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 1.6e-21 108.2 353 32.6
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 2.1e-21 107.8 427 29.3
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 2.7e-21 107.5 427 29.0
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 3.6e-21 107.1 398 29.6
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 3.6e-21 107.1 396 29.8
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 3.6e-21 107.1 421 29.9
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 4.6e-21 106.7 406 29.1
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 4.6e-21 106.7 398 29.4
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 4.6e-21 106.7 401 30.2
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 4.6e-21 106.7 412 28.9
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 6.1e-21 106.3 417 29.7
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.0e-20 105.5 430 30.0
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 1.4e-20 105.1 398 29.4
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 1.8e-20 104.8 339 32.4
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 1.8e-20 104.8 400 30.0
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 1.8e-20 104.8 404 29.2
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 1.8e-20 104.8 404 29.2
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 2.3e-20 104.4 384 30.7
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 2.3e-20 104.4 404 29.2
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 3.0e-20 104.0 419 29.8
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 3.0e-20 104.0 414 29.5
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 3.9e-20 103.6 398 28.9
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 5.1e-20 103.2 392 29.1
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 5.1e-20 103.2 338 32.2
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 1.1e-19 102.1 340 30.9
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 1.5e-19 101.7 398 29.4
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 1.5e-19 101.7 398 29.1
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 1.5e-19 101.7 422 28.0
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 2.0e-19 101.3 404 28.7
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 2.5e-19 100.9 410 28.8
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 2.5e-19 100.9 362 31.2
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 3.3e-19 100.5 339 31.3
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 3.3e-19 100.5 394 27.9
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 4.3e-19 100.1 352 30.7
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 4.3e-19 100.1 432 28.9
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 7.4e-19 99.4 336 29.8
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 1.7e-18 98.2 442 29.0
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 1.7e-18 98.2 426 28.9
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.7e-18 98.2 336 29.5
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.7e-18 98.2 287 30.7
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.7e-18 98.2 339 29.8
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 2.2e-18 97.8 417 27.1
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.2e-18 97.8 354 29.7
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 2.2e-18 97.8 405 28.9
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 3.7e-18 97.1 397 29.0
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 3.7e-18 97.1 396 30.1
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 4.8e-18 96.7 428 29.0
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 6.3e-18 96.3 237 36.3
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 6.3e-18 96.3 396 29.5
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 6.3e-18 96.3 353 28.0
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 8.2e-18 95.9 408 28.4
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 1.1e-17 95.5 412 27.4
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 1.1e-17 95.5 283 32.2
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.4e-17 95.1 397 27.2
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 2.6e-16 90.9 341 28.4
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 5.9e-16 89.7 392 29.6
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 7.7e-16 89.4 341 28.7
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 7.7e-16 89.4 341 28.7
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.2e-15 87.8 177 40.1
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.9e-15 87.4 161 42.2
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 3.8e-15 87.0 415 28.2
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 5.0e-15 86.7 354 29.4
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 8.5e-15 85.9 392 28.1
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 4.2e-14 83.6 271 31.7
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 5.5e-14 83.2 412 26.0
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 5.5e-14 83.2 180 38.3
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 7.2e-14 82.8 404 26.2
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 1.2e-13 82.0 399 26.3
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 1.6e-13 81.6 228 33.8
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 2.1e-13 81.3 395 28.1
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 2.1e-13 81.3 349 28.7
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 1.0e-12 79.0 412 27.4
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 1.8e-12 78.2 359 27.9
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 1.8e-12 78.2 306 30.4
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 3.9e-12 77.0 383 25.6
PSO832G3890 Papaver somniferum HOM05D000071 ORTHO05D003524 5.7e-11 73.2 73 54.8
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 2.8e-10 70.9 287 28.2
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 4.1e-09 67.0 389 27.0
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 9.1e-09 65.9 374 26.5
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 5.9e-08 63.2 86 50.0
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 3.8e-07 60.5 56 58.9
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 5.5e-06 56.6 56 51.8


User provided reference genes

Program Settings