Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 1.1e-303 1045.8 533 100.0
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 1.8e-224 782.7 442 92.3
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 3.7e-129 466.1 517 51.3
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 2.0e-127 460.3 536 49.1
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 2.6e-127 459.9 523 50.1
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 2.0e-122 443.7 525 48.0
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 2.8e-121 439.9 525 48.2
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 1.8e-120 437.2 516 46.9
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 6.9e-120 435.3 463 53.8
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 2.0e-119 433.7 516 47.5
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.9e-117 427.2 514 47.3
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 7.2e-117 425.2 518 47.5
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 2.1e-116 423.7 516 48.4
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 2.7e-116 423.3 521 47.8
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 4.7e-116 422.5 507 49.9
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 1.4e-115 421.0 512 47.3
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 3.0e-115 419.9 510 46.5
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 5.1e-115 419.1 512 47.1
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 6.7e-115 418.7 515 46.4
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.4e-114 416.0 521 46.3
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 5.7e-114 415.6 542 45.9
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 9.7e-114 414.8 537 44.7
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.3e-113 414.5 452 51.3
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.7e-113 412.9 522 47.3
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 1.4e-112 411.0 524 46.4
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 1.8e-112 410.6 476 50.8
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 3.1e-112 409.8 539 45.8
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 4.1e-112 409.5 533 46.2
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 1.3e-110 404.4 514 46.3
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.8e-110 402.9 535 45.0
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 1.1e-109 401.4 508 44.7
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 1.5e-109 401.0 522 45.8
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 1.5e-109 401.0 527 44.8
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 1.9e-109 400.6 530 44.5
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 5.2e-107 392.5 517 44.9
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 5.2e-107 392.5 513 45.6
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 6.7e-107 392.1 535 44.7
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 1.5e-106 391.0 532 44.9
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 5.7e-106 389.0 511 43.6
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 2.8e-105 386.7 536 43.5
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 8.2e-105 385.2 522 43.3
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 1.4e-104 384.4 524 43.1
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 3.1e-104 383.3 526 44.5
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 3.1e-104 383.3 514 42.0
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 7.0e-104 382.1 511 43.6
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 9.1e-104 381.7 480 46.2
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 2.6e-103 380.2 512 43.6
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 4.5e-103 379.4 518 44.8
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 4.5e-103 379.4 518 43.2
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 1.0e-102 378.3 534 43.4
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 2.9e-102 376.7 510 43.5
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 3.8e-102 376.3 452 47.8
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 5.0e-102 375.9 522 44.3
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 8.5e-102 375.2 515 42.7
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 1.5e-101 374.4 538 44.1
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 1.5e-101 374.4 520 41.9
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 2.5e-101 373.6 499 43.7
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 2.5e-101 373.6 531 41.8
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 3.2e-101 373.2 517 42.7
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 4.2e-101 372.9 502 45.2
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 5.5e-101 372.5 553 41.2
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.6e-100 370.9 479 44.1
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 6.1e-100 369.0 506 43.9
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 1.0e-99 368.2 506 43.7
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 1.4e-99 367.9 510 43.5
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 2.3e-99 367.1 577 41.9
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 3.0e-99 366.7 528 43.2
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 3.0e-99 366.7 501 43.1
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 8.8e-99 365.2 515 42.1
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 9.8e-98 361.7 507 42.6
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 9.8e-98 361.7 491 45.2
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 2.2e-97 360.5 459 46.0
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 2.2e-97 360.5 411 47.2
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 3.1e-96 356.7 463 47.5
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 1.6e-95 354.4 407 47.4
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 1.6e-95 354.4 407 47.4
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 5.9e-95 352.4 481 44.5
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 6.5e-94 349.0 585 39.1
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 9.4e-93 345.1 404 46.3
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 8.0e-92 342.0 597 37.9
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 4.0e-91 339.7 506 41.7
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 6.8e-91 339.0 506 41.9
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 1.7e-89 334.3 510 41.6
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 2.2e-89 334.0 528 40.5
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 4.9e-89 332.8 506 42.1
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.4e-88 330.5 474 41.8
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 5.4e-88 329.3 495 41.4
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 4.5e-87 326.2 374 51.9
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 2.9e-86 323.6 382 50.3
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 2.8e-84 317.0 531 40.3
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 5.2e-83 312.8 537 38.9
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.5e-77 293.9 533 37.7
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 3.6e-76 290.0 533 37.5
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 3.4e-74 283.5 581 35.5
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 3.6e-68 263.5 367 43.3
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 8.1e-68 262.3 420 41.4
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.1e-67 261.9 408 39.7
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 6.8e-67 259.2 535 35.5
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 8.9e-67 258.8 372 40.6
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 1.5e-66 258.1 513 34.3
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 1.2e-63 248.4 403 38.5
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 1.6e-63 248.1 393 37.4
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 2.5e-61 240.7 331 42.9
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 8.4e-57 225.7 214 53.3
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.1e-39 167.9 217 45.2
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 5.6e-37 159.8 229 45.0
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 3.1e-35 154.1 290 38.3
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 3.2e-32 144.1 208 45.2
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 2.8e-28 131.0 193 38.9
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 1.1e-27 129.0 206 39.3
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 5.8e-26 123.2 162 41.4
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 1.9e-24 118.2 300 28.7
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 7.1e-24 116.3 224 35.7
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.3e-17 95.5 109 47.7
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 8.4e-17 92.8 118 46.6
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 1.4e-11 75.5 147 42.9
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 9.0e-11 72.8 70 52.9
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 7.2e-08 63.2 51 58.8
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.8e-06 58.5 65 46.2


User provided reference genes

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