Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 3.9e-71 271.6 155 100.0
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 2.1e-64 249.2 155 87.7
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.8e-37 159.1 159 63.5
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.8e-36 156.4 132 69.7
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 4.0e-36 155.2 154 60.4
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 9.0e-36 154.1 112 75.9
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.2e-35 153.7 157 63.1
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 9.9e-35 150.6 156 63.5
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 9.9e-35 150.6 155 62.6
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 2.2e-34 149.4 157 58.6
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 2.9e-34 149.1 154 60.4
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 4.9e-34 148.3 158 58.9
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 6.4e-34 147.9 127 69.3
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 1.1e-33 147.1 161 59.0
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 2.4e-33 146.0 124 69.4
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 3.2e-33 145.6 130 66.2
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 3.2e-33 145.6 114 72.8
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.2e-33 145.6 123 68.3
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 3.2e-33 145.6 159 58.5
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 4.2e-33 145.2 123 69.1
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 1.2e-32 143.7 128 70.3
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.6e-32 143.3 156 59.0
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 1.6e-32 143.3 126 68.3
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.1e-32 142.9 124 68.5
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 2.7e-32 142.5 155 58.7
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 4.6e-32 141.7 114 71.9
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 6.0e-32 141.4 124 67.7
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 6.0e-32 141.4 158 58.9
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 6.0e-32 141.4 156 59.0
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 7.9e-32 141.0 125 69.6
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.0e-31 140.6 130 62.3
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 3.9e-31 138.7 125 63.2
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 6.7e-31 137.9 120 68.3
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 8.7e-31 137.5 152 58.6
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 1.1e-30 137.1 152 57.9
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.5e-30 136.7 148 58.8
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 1.5e-30 136.7 117 66.7
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.9e-30 136.3 112 70.5
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 3.3e-30 135.6 117 67.5
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 4.3e-30 135.2 160 57.5
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 4.3e-30 135.2 114 67.5
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 4.3e-30 135.2 118 67.8
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 5.6e-30 134.8 153 56.9
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 7.4e-30 134.4 123 62.6
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 7.4e-30 134.4 111 67.6
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.3e-29 133.7 119 64.7
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.1e-29 132.9 110 69.1
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 2.1e-29 132.9 113 67.3
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 2.1e-29 132.9 116 68.1
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 4.8e-29 131.7 121 61.2
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 4.8e-29 131.7 133 60.2
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 6.2e-29 131.3 109 68.8
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 2.4e-28 129.4 113 65.5
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 2.4e-28 129.4 111 66.7
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 2.4e-28 129.4 111 66.7
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 2.4e-28 129.4 113 65.5
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 2.4e-28 129.4 127 61.4
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 3.1e-28 129.0 122 61.5
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 3.1e-28 129.0 116 66.4
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 3.1e-28 129.0 113 65.5
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 4.0e-28 128.6 118 63.6
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 4.0e-28 128.6 129 65.1
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 4.0e-28 128.6 116 66.4
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 4.0e-28 128.6 82 80.5
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 5.3e-28 128.3 164 52.4
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 9.0e-28 127.5 109 67.0
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 9.0e-28 127.5 115 65.2
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.2e-27 127.1 109 67.0
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.2e-27 127.1 117 65.0
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.2e-27 127.1 117 65.0
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.2e-27 127.1 117 65.0
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 77 85.7
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 122 62.3
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 122 61.5
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 2.0e-27 126.3 113 63.7
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 2.0e-27 126.3 113 63.7
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 2.0e-27 126.3 109 66.1
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 2.0e-27 126.3 122 61.5
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.4e-27 125.6 157 53.5
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.4e-27 125.6 115 65.2
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 4.5e-27 125.2 117 64.1
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 5.8e-27 124.8 113 63.7
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 5.8e-27 124.8 113 63.7
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 5.8e-27 124.8 152 53.3
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 7.6e-27 124.4 154 54.5
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 7.6e-27 124.4 125 61.6
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 7.6e-27 124.4 125 61.6
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.3e-26 123.6 115 61.7
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 1.7e-26 123.2 123 62.6
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.7e-26 123.2 153 52.9
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 2.2e-26 122.9 120 61.7
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 2.2e-26 122.9 115 65.2
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.9e-26 122.5 78 80.8
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 2.9e-26 122.5 118 62.7
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.8e-26 122.1 125 62.4
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 3.8e-26 122.1 111 64.9
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.8e-26 122.1 149 55.0
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 4.9e-26 121.7 115 63.5
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 2.5e-25 119.4 127 59.8
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 4.6e-24 115.2 96 65.6
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 6.0e-24 114.8 70 84.3
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 1.0e-23 114.0 123 56.9
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.3e-23 113.6 127 56.7
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.8e-23 113.2 70 82.9
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 2.3e-23 112.8 125 57.6
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.1e-22 110.5 194 42.3
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 3.7e-21 105.5 122 60.7
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 8.2e-21 104.4 131 49.6
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.8e-20 103.2 102 66.7
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.5e-19 100.1 148 48.6
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 2.0e-19 99.8 73 72.6
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 2.9e-18 95.9 67 76.1
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 5.0e-18 95.1 67 68.7
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 1.1e-17 94.0 61 77.0
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 1.4e-17 93.6 96 60.4
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.5e-16 89.0 121 50.4
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.0e-15 87.4 104 56.7
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.8e-15 86.7 113 49.6
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 4.5e-11 72.0 61 63.9
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.2e-10 69.7 108 48.1
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 2.2e-10 69.7 85 55.3
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 3.0e-07 59.3 71 52.1
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 3.9e-07 58.9 77 45.5
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 3.9e-07 58.9 48 70.8
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 4.3e-06 55.5 61 47.5


User provided reference genes

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