Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 5.5e-147 524.2 259 100.0
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 4.4e-144 514.6 259 98.5
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 1.5e-104 383.3 257 75.1
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 1.0e-100 370.5 254 71.7
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.9e-100 368.6 258 71.3
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 6.6e-100 367.9 254 71.7
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.1e-99 367.1 258 71.3
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 9.5e-99 364.0 251 71.7
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.2e-98 363.6 251 72.1
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.4e-97 360.1 249 71.9
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 5.2e-97 358.2 245 71.8
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 8.9e-97 357.5 274 66.4
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 1.5e-96 356.7 254 68.9
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 2.0e-96 356.3 245 71.8
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 2.6e-96 355.9 254 66.5
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 3.4e-96 355.5 258 66.7
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 3.4e-96 355.5 253 68.4
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 5.8e-96 354.8 247 69.6
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 8.4e-95 350.9 249 69.5
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 8.4e-95 350.9 252 68.3
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.1e-94 350.5 254 68.1
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 1.4e-94 350.1 257 66.9
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.9e-94 349.7 242 69.4
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 4.2e-94 348.6 251 70.9
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 4.2e-94 348.6 257 66.9
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 5.4e-94 348.2 272 64.3
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 1.2e-93 347.1 245 69.4
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.6e-93 346.7 254 67.7
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 2.7e-93 345.9 257 66.9
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 3.5e-93 345.5 257 66.5
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.0e-92 344.0 254 66.9
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 1.7e-92 343.2 257 67.7
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 6.6e-92 341.3 252 67.9
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 8.7e-92 340.9 255 66.3
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 8.7e-92 340.9 261 68.6
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 8.7e-92 340.9 257 65.0
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 1.1e-91 340.5 248 71.4
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 1.5e-91 340.1 246 68.7
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 3.3e-91 339.0 265 65.7
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 3.3e-91 339.0 255 66.3
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 4.3e-91 338.6 257 64.2
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 5.6e-91 338.2 255 67.1
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 7.3e-91 337.8 255 65.5
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 9.6e-91 337.4 245 66.1
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 3.6e-90 335.5 257 63.8
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 4.7e-90 335.1 256 64.8
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 8.1e-90 334.3 255 65.9
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.1e-89 334.0 239 71.1
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 1.4e-89 333.6 243 65.0
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 1.4e-89 333.6 243 65.0
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 4.0e-89 332.0 257 65.0
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 4.0e-89 332.0 253 65.2
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 5.3e-89 331.6 243 66.7
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 1.2e-88 330.5 243 64.6
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 1.5e-88 330.1 243 64.6
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 2.0e-88 329.7 249 63.9
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 2.0e-88 329.7 257 66.1
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 2.6e-88 329.3 261 62.5
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 7.6e-88 327.8 258 62.4
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 7.6e-88 327.8 265 62.6
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 9.9e-88 327.4 260 65.4
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.3e-87 327.0 244 66.0
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 1.7e-87 326.6 258 62.8
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 1.7e-87 326.6 247 65.6
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.7e-87 326.6 255 64.3
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 4.9e-87 325.1 241 66.0
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 6.4e-87 324.7 236 68.2
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 8.4e-87 324.3 260 61.9
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.9e-86 323.2 257 64.6
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 3.2e-86 322.4 257 64.2
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 4.2e-86 322.0 246 63.4
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 7.1e-86 321.2 242 66.9
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 9.3e-86 320.9 234 65.8
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 1.2e-85 320.5 259 63.3
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 2.1e-85 319.7 242 64.0
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 2.1e-85 319.7 243 63.8
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 3.5e-85 318.9 238 64.7
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 4.6e-85 318.5 233 67.8
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 6.0e-85 318.2 255 62.0
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 1.0e-84 317.4 230 68.7
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 1.0e-84 317.4 255 61.6
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 1.3e-84 317.0 236 65.3
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.3e-84 317.0 242 65.7
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 1.7e-84 316.6 257 63.4
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.3e-84 316.2 230 68.3
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 5.1e-84 315.1 245 63.3
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 1.9e-83 313.2 245 64.1
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 4.3e-83 312.0 245 63.7
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 2.1e-82 309.7 261 59.4
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 1.4e-81 307.0 244 62.3
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 2.9e-79 299.3 242 59.9
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 8.4e-79 297.7 241 62.7
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 2.4e-78 296.2 272 57.7
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.0e-77 291.6 221 68.3
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 2.3e-76 289.7 237 61.6
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 8.7e-76 287.7 270 53.0
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 8.1e-74 281.2 239 57.3
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.4e-70 270.4 273 50.2
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 2.5e-70 269.6 234 59.0
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 4.2e-70 268.9 220 60.5
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.3e-68 263.8 220 60.9
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 1.1e-67 260.8 170 75.3
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.1e-67 260.8 218 59.2
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.5e-67 259.6 220 60.0
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 2.4e-65 253.1 243 52.7
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.7e-63 246.9 258 51.6
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.9e-63 245.4 170 71.2
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 3.2e-62 242.7 195 63.6
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 2.1e-61 240.0 170 71.2
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 3.0e-60 236.1 170 65.9
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.1e-59 234.2 178 66.9
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 7.7e-56 221.5 234 48.7
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.0e-52 209.5 152 67.1
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 6.9e-49 198.4 236 44.9
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 1.5e-48 197.2 219 46.1
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.7e-44 181.8 138 68.1
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 8.8e-44 181.4 170 56.5
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 7.4e-43 178.3 117 71.8
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 3.1e-41 172.9 129 69.0
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 7.0e-41 171.8 182 51.1
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.1e-35 154.5 129 61.2
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 7.4e-35 151.8 107 68.2
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.3e-34 151.0 129 60.5
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 4.0e-28 129.4 137 48.9
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 4.0e-28 129.4 92 73.9
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.7e-26 124.0 128 50.0
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.8e-25 120.6 86 65.1
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.3e-23 114.4 83 66.3
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 5.0e-23 112.5 107 51.4
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 1.5e-22 110.9 98 59.2
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 1.5e-22 110.9 98 59.2
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 1.2e-19 101.3 86 55.8
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 4.8e-18 95.9 247 30.0
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.4e-17 94.4 257 30.0
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 1.4e-17 94.4 85 50.6
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 3.3e-06 56.6 55 50.9


User provided reference genes

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