Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 7.9e-98 360.5 194 100.0
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 1.4e-94 349.7 193 94.8
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 5.2e-65 251.5 195 67.2
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 1.6e-58 229.9 198 65.2
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 2.7e-58 229.2 197 63.5
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 3.0e-57 225.7 171 67.3
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 1.8e-54 216.5 195 61.5
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 7.0e-54 214.5 199 60.8
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 9.2e-54 214.2 195 60.5
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 9.2e-54 214.2 203 61.1
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 1.2e-53 213.8 191 60.7
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 2.0e-53 213.0 191 60.7
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 5.9e-53 211.5 201 60.2
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 1.0e-52 210.7 199 59.8
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 3.8e-52 208.8 190 61.1
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 3.8e-52 208.8 192 59.4
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 3.8e-52 208.8 202 58.4
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 6.6e-52 208.0 192 60.9
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 6.6e-52 208.0 193 60.1
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 1.9e-51 206.5 201 58.2
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 1.9e-51 206.5 195 57.9
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 7.3e-51 204.5 175 61.7
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 1.2e-50 203.8 200 59.5
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 2.8e-50 202.6 206 56.3
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 3.6e-50 202.2 192 58.9
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 3.6e-50 202.2 192 58.3
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 6.1e-50 201.4 180 58.9
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 8.0e-50 201.1 196 57.1
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 1.8e-49 199.9 194 55.7
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 2.3e-49 199.5 192 57.8
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 2.3e-49 199.5 186 55.4
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 2.3e-49 199.5 188 57.4
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 4.0e-49 198.7 184 60.9
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 5.2e-49 198.4 197 56.9
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 6.8e-49 198.0 231 51.9
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 8.9e-49 197.6 206 55.8
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 8.9e-49 197.6 196 57.7
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 1.2e-48 197.2 194 56.7
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 1.2e-48 197.2 192 57.8
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 2.0e-48 196.4 144 65.3
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 2.6e-48 196.1 194 56.2
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 4.4e-48 195.3 187 56.7
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 1.3e-47 193.7 188 58.0
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 1.7e-47 193.4 189 58.7
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 1.7e-47 193.4 200 54.0
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 2.2e-47 193.0 140 67.9
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 2.2e-47 193.0 179 59.8
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 2.9e-47 192.6 198 57.1
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 4.9e-47 191.8 198 56.1
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 4.9e-47 191.8 196 56.6
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 4.1e-46 188.7 195 57.4
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 4.1e-46 188.7 231 49.8
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 1.2e-45 187.2 186 55.9
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 1.2e-45 187.2 194 55.2
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 2.0e-45 186.4 186 56.5
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 5.9e-45 184.9 190 57.9
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 1.3e-44 183.7 194 55.2
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 2.3e-44 183.0 199 54.3
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 8.6e-44 181.0 203 55.7
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 8.6e-44 181.0 189 54.5
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 1.1e-43 180.6 203 54.7
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 5.6e-43 178.3 202 54.5
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 9.5e-43 177.6 192 51.6
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 9.5e-43 177.6 202 54.0
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 2.8e-42 176.0 168 57.7
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 3.6e-42 175.6 163 55.2
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 3.6e-42 175.6 212 50.9
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 8.0e-42 174.5 202 54.0
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 1.0e-41 174.1 163 54.6
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 1.4e-41 173.7 201 49.8
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 1.8e-41 173.3 192 54.7
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 4.0e-41 172.2 189 49.7
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 4.0e-41 172.2 182 56.6
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 5.2e-41 171.8 201 52.2
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 6.8e-41 171.4 140 60.7
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 1.5e-40 170.2 203 47.8
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 2.0e-40 169.9 199 50.8
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 2.6e-40 169.5 186 51.6
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 6.4e-39 164.9 218 46.3
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 9.2e-38 161.0 197 47.7
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 1.2e-37 160.6 197 48.2
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 4.6e-37 158.7 168 53.0
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.3e-36 156.4 102 70.6
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 5.0e-36 155.2 182 46.7
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 1.1e-35 154.1 140 53.6
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 6.2e-34 148.3 102 67.6
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 9.8e-32 141.0 159 51.6
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 2.4e-30 136.3 135 56.3
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 1.7e-23 113.6 105 57.1
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 3.8e-23 112.5 112 60.7
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 6.4e-23 111.7 84 66.7
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 1.1e-22 110.9 197 41.6
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 2.4e-22 109.8 148 45.3
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 4.1e-22 109.0 104 56.7
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 2.7e-21 106.3 114 48.2
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 6.0e-21 105.1 76 61.8
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 1.0e-20 104.4 82 62.2
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 1.3e-20 104.0 72 66.7
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 3.9e-20 102.4 105 53.3
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 6.6e-20 101.7 96 54.2
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 1.5e-19 100.5 107 43.9
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 1.9e-19 100.1 112 52.7
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 1.9e-19 100.1 107 43.0
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 1.6e-18 97.1 102 43.1
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 3.6e-18 95.9 74 62.2
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 6.2e-18 95.1 64 70.3
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 2.4e-17 93.2 108 53.7
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 2.4e-17 93.2 108 53.7
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 2.6e-16 89.7 67 59.7
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 2.6e-16 89.7 67 59.7
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 7.6e-16 88.2 69 63.8
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 1.7e-15 87.0 108 50.0
MCO03G004 Micromonas commoda HOM05D006725 ORTHO05D008223 2.4e-14 83.2 111 36.0
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 3.5e-13 79.3 161 37.9
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 3.5e-13 79.3 52 67.3
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 2.3e-12 76.6 55 70.9
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 8.7e-12 74.7 52 67.3
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 1.5e-11 73.9 51 66.7
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 1.9e-11 73.6 52 65.4
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 1.7e-07 60.5 95 37.9
Peaxi162Scf00452g00832 Petunia axillaris HOM05D006308 ORTHO05D007820 3.2e-06 56.2 104 36.5
SEGI_12516 Sequoiadendron giganteum HOM05D006308 ORTHO05D007820 3.2e-06 56.2 130 28.5
CAN.G943.39 Capsicum annuum HOM05D006308 ORTHO05D007820 4.2e-06 55.8 104 35.6
Solyc07g066460.3 Solanum lycopersicum HOM05D006308 ORTHO05D007820 5.4e-06 55.5 104 36.5
Sopen07g034640 Solanum pennellii HOM05D006308 ORTHO05D007820 5.4e-06 55.5 104 36.5
PGSC0003DMG400022127 Solanum tuberosum HOM05D006308 ORTHO05D007820 5.4e-06 55.5 104 36.5
Sabra11G0127800 Salix brachista HOM05D006308 ORTHO05D007820 9.3e-06 54.7 106 33.0


User provided reference genes

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