Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1596.6 863 100.0
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1320.4 792 91.3
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1213.4 804 85.2
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1203.0 786 85.9
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.7e-262 909.1 818 65.5
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 3.8e-261 905.2 817 65.4
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 4.2e-260 901.7 824 64.4
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 2.2e-256 889.4 871 59.7
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 4.5e-254 881.7 821 63.1
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 5.2e-250 868.2 812 62.6
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 1.2e-249 867.1 827 61.9
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 1.5e-244 850.1 758 65.8
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 3.6e-243 845.5 783 62.1
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 6.8e-242 841.3 834 58.3
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.2e-241 840.5 829 59.5
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 3.4e-241 839.0 855 57.8
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 4.4e-241 838.6 818 60.8
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 4.4e-241 838.6 820 59.6
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 7.5e-241 837.8 820 58.9
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 7.5e-241 837.8 821 60.9
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 1.3e-240 837.0 815 61.6
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 1.3e-240 837.0 816 60.0
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.9e-239 833.2 826 60.3
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 2.4e-239 832.8 822 60.7
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 3.2e-239 832.4 836 58.7
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 1.2e-238 830.5 830 57.7
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.3e-237 827.0 806 61.0
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 8.6e-237 824.3 805 59.6
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 1.5e-236 823.5 803 59.9
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 1.9e-236 823.2 820 59.8
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 3.3e-236 822.4 805 59.8
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 3.1e-234 815.8 824 59.5
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 3.1e-234 815.8 830 58.8
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.3e-232 810.4 822 59.6
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 4.9e-232 808.5 847 58.3
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 6.4e-232 808.1 831 57.9
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 8.3e-232 807.7 803 59.7
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 2.4e-231 806.2 806 60.7
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 4.6e-230 802.0 812 56.3
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.9e-229 798.9 798 59.9
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 5.1e-229 798.5 823 57.0
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.6e-229 798.1 804 59.7
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 6.6e-229 798.1 786 61.5
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 1.1e-228 797.3 800 57.4
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 1.1e-228 797.3 793 58.8
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.9e-228 796.6 803 58.0
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 9.5e-228 794.3 790 57.1
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 3.6e-227 792.3 834 56.8
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 8.1e-227 791.2 811 56.4
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 1.1e-226 790.8 825 57.5
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 2.3e-226 789.6 825 57.8
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 8.9e-226 787.7 821 55.5
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 2.0e-225 786.6 787 58.1
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 4.4e-225 785.4 806 58.9
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.4e-223 780.4 817 55.4
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 9.2e-223 777.7 812 59.0
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 1.2e-222 777.3 829 54.6
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.6e-222 776.9 821 56.8
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 2.7e-222 776.2 811 57.0
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 1.3e-221 773.9 808 57.8
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.4e-218 763.8 793 58.4
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 2.4e-218 763.1 787 56.4
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 4.0e-218 762.3 835 55.6
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 5.2e-218 761.9 805 56.6
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 8.9e-218 761.1 812 56.3
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 8.9e-218 761.1 783 58.1
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 1.2e-217 760.8 785 58.3
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 3.8e-216 755.7 831 55.5
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 6.4e-216 755.0 818 54.8
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 1.9e-215 753.4 807 56.4
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 2.7e-214 749.6 783 57.1
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 1.3e-213 747.3 818 56.0
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 3.0e-213 746.1 751 59.5
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.1e-212 744.2 800 57.4
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 1.1e-210 737.6 811 56.4
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 9.0e-210 734.6 804 55.1
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 5.8e-209 731.9 810 55.7
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 1.3e-208 730.7 814 55.3
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 6.4e-208 728.4 823 54.3
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 8.4e-208 728.0 880 53.1
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.4e-208 728.0 810 53.1
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 1.3e-205 720.7 787 55.1
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 8.7e-205 718.0 799 54.2
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 9.3e-199 698.0 741 54.8
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 4.8e-195 685.6 814 53.1
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.1e-194 682.9 774 55.4
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 2.0e-193 680.2 651 63.6
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 3.9e-189 666.0 817 52.0
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 1.1e-188 664.5 694 58.4
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 1.9e-188 663.7 808 52.0
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 1.1e-186 657.9 825 51.5
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 4.1e-186 656.0 817 48.1
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 2.6e-185 653.3 818 51.7
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 3.4e-185 652.9 825 51.3
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 7.6e-185 651.7 772 51.8
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.4e-183 647.5 814 51.2
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 8.7e-181 638.3 814 51.1
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 4.1e-178 629.4 820 50.5
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 8.5e-176 621.7 822 48.7
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 9.4e-175 618.2 810 49.5
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 3.9e-173 612.8 807 50.1
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 1.2e-169 601.3 798 48.0
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 3.4e-169 599.7 796 49.4
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 4.5e-169 599.4 825 45.5
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 2.9e-168 596.7 915 44.9
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 5.0e-168 595.9 790 46.5
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 9.4e-167 591.7 790 46.2
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 2.1e-166 590.5 790 46.2
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 3.6e-166 589.7 435 69.0
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 4.4e-156 556.2 826 43.1
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 3.1e-154 550.1 586 59.9
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 7.7e-153 545.4 737 48.0
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 5.9e-145 519.2 728 47.7
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 4.1e-138 496.5 700 45.0
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 1.5e-135 488.0 649 51.2
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 3.4e-132 476.9 724 42.7
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.4e-130 471.5 477 56.8
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 1.7e-123 448.0 545 55.0
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 1.4e-122 444.9 319 72.4
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 9.5e-119 432.2 468 60.3
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.1e-118 431.0 854 38.8
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 2.8e-118 430.6 875 38.4
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 1.1e-111 408.7 521 50.7
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 1.9e-111 407.9 526 54.2
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 1.3e-107 395.2 346 60.4
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 7.3e-95 352.8 437 53.5
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 2.2e-91 341.3 456 44.7
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 4.9e-91 340.1 818 35.0
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 4.2e-90 337.0 547 42.2
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.0e-89 333.2 274 62.8
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 1.6e-86 325.1 776 33.6
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 9.9e-84 315.8 896 31.1
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 2.2e-83 314.7 476 43.1
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.2e-81 308.9 522 40.8
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 2.7e-81 307.8 536 37.3
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 5.9e-60 236.9 780 29.6
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 3.4e-52 211.1 352 44.3
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 1.1e-45 189.5 174 60.9
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.4e-45 189.1 227 52.9
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 8.0e-41 173.3 391 39.9
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-39 169.1 393 36.9
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 6.8e-32 143.7 145 49.0
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 8.8e-32 143.3 134 63.4
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.8e-30 138.3 303 38.3
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 8.3e-30 136.7 134 52.2
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.1e-29 134.4 324 35.8
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.3e-24 118.6 127 51.2
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-22 112.5 127 52.8
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.2e-20 106.3 271 35.1
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.9e-20 104.0 81 63.0
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 5.0e-19 100.9 94 55.3
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 6.6e-19 100.5 77 64.9
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 3.3e-18 98.2 102 55.9
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 8.0e-17 93.6 96 51.0
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.3e-16 92.0 225 34.7
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.0e-16 91.7 264 32.6
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.9e-16 90.1 327 31.8
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.7e-15 87.4 69 63.8
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 2.2e-14 85.5 82 58.5
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.9e-14 84.3 117 47.0
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.8e-13 82.4 197 37.1
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.1e-13 81.3 128 44.5
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 9.2e-13 80.1 71 63.4
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.7e-12 78.6 114 42.1
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.3e-11 75.5 80 51.2
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.0e-11 74.3 62 62.9
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 8.6e-11 73.6 112 44.6
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 4.3e-10 71.2 54 68.5
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 7.3e-10 70.5 90 51.1
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.0e-07 62.4 320 26.2
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 2.6e-07 62.0 41 70.7
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 7.5e-07 60.5 48 66.7
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 9.8e-07 60.1 82 39.0
HPP92_028374 Vanilla planifolia HOM05D003551 ORTHO05D016818 9.8e-07 60.1 102 41.2
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 1.7e-06 59.3 172 30.2
HPP92_028489 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.2e-06 58.9 54 59.3
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.9e-06 58.5 144 37.5


User provided reference genes

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