Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 5.9e-214 747.3 379 100.0
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 1.6e-211 739.2 379 99.2
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 9.5e-148 527.3 406 66.5
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 2.4e-146 522.7 379 66.2
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 4.0e-146 521.9 379 66.2
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 5.2e-146 521.5 375 66.9
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 3.4e-145 518.8 375 66.7
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 2.7e-142 509.2 376 66.0
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 4.6e-142 508.4 375 64.5
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 1.3e-141 506.9 375 68.8
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 1.7e-141 506.5 377 65.5
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 2.3e-141 506.1 375 64.5
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 2.3e-141 506.1 376 64.4
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 3.9e-141 505.4 376 63.3
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 1.1e-140 503.8 375 66.4
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 1.5e-140 503.4 375 65.1
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 1.9e-140 503.1 374 65.0
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 2.5e-140 502.7 375 64.5
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 5.6e-140 501.5 379 63.3
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 9.6e-140 500.7 361 67.9
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 2.8e-139 499.2 379 63.3
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 8.1e-139 497.7 375 64.3
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 1.1e-138 497.3 375 64.3
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 1.8e-138 496.5 428 58.9
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 1.8e-138 496.5 375 63.7
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 5.2e-138 495.0 376 63.8
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.2e-137 493.8 376 62.2
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 1.5e-137 493.4 375 64.8
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 1.5e-137 493.4 379 62.5
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 2.0e-137 493.0 379 62.5
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 3.4e-137 492.3 379 62.8
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 5.8e-137 491.5 376 62.0
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 9.9e-137 490.7 375 63.5
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 2.2e-136 489.6 376 63.3
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 2.9e-136 489.2 375 63.5
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 2.9e-136 489.2 375 62.7
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 6.4e-136 488.0 376 61.7
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.1e-135 487.3 376 61.4
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 1.4e-135 486.9 379 61.7
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 3.2e-135 485.7 375 62.4
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 5.4e-135 485.0 379 64.9
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 2.1e-134 483.0 379 62.3
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 6.0e-134 481.5 375 61.6
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 6.0e-134 481.5 375 62.9
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 3.9e-133 478.8 379 61.7
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 5.1e-133 478.4 376 62.8
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 8.7e-133 477.6 379 62.0
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 4.3e-132 475.3 379 62.0
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 1.3e-131 473.8 377 59.9
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.3e-131 473.8 386 59.1
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 2.8e-131 472.6 379 60.7
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 8.1e-131 471.1 379 60.4
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 8.1e-131 471.1 379 60.4
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 2.4e-130 469.5 376 60.4
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 3.1e-130 469.2 378 60.6
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 5.3e-130 468.4 375 62.1
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 1.2e-129 467.2 376 60.6
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 1.2e-129 467.2 379 59.6
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 1.5e-129 466.8 376 61.2
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 2.0e-129 466.5 374 61.2
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 4.5e-129 465.3 376 60.4
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 1.3e-128 463.8 375 58.1
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 8.4e-128 461.1 374 61.0
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 3.2e-127 459.1 375 60.3
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 5.4e-127 458.4 376 59.0
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 1.6e-126 456.8 379 58.6
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 2.1e-126 456.4 376 60.1
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 2.7e-126 456.1 379 58.8
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 3.5e-126 455.7 378 59.3
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 1.8e-125 453.4 382 57.9
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 3.0e-125 452.6 382 58.6
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 5.1e-125 451.8 365 60.5
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 6.7e-125 451.4 379 58.0
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 6.7e-125 451.4 382 57.9
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 8.7e-125 451.1 382 57.9
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 8.7e-125 451.1 382 57.9
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 8.7e-125 451.1 378 58.7
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 1.5e-124 450.3 382 57.9
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 2.5e-124 449.5 381 57.7
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 7.4e-124 448.0 379 58.8
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 2.1e-123 446.4 377 59.4
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 1.4e-122 443.7 379 57.3
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 1.8e-122 443.4 379 58.6
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 2.9e-120 436.0 374 57.5
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 8.4e-120 434.5 398 55.8
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 4.2e-119 432.2 376 57.2
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 1.1e-114 417.5 375 56.8
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 1.4e-114 417.2 316 64.2
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 9.0e-114 414.5 370 55.4
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 1.2e-113 414.1 385 55.3
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 3.2e-111 406.0 379 54.9
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 7.1e-111 404.8 425 49.9
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 5.7e-100 368.6 375 47.5
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 6.3e-99 365.2 373 49.6
Sabra16G0132100 Salix brachista HOM05D005972 ORTHO05D007548 1.8e-90 337.0 269 59.9
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 3.8e-88 329.3 265 61.9
Mapoly0188s0014 Marchantia polymorpha HOM05D005972 ORTHO05D007548 5.2e-85 318.9 364 45.1
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 5.0e-80 302.4 276 55.8
unitig_747.g21237 Utricularia gibba HOM05D005972 ORTHO05D007548 9.4e-79 298.1 403 42.2
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 1.5e-71 274.2 191 66.0
Pp3c15_20500 Physcomitrium patens HOM05D005972 ORTHO05D007548 8.0e-70 268.5 374 36.6
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 2.2e-67 260.4 260 54.6
Aqoxy3G01225 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 4.9e-51 206.1 167 64.1
Cc02_g21910 Coffea canephora HOM05D005972 ORTHO05D007548 1.4e-42 177.9 135 63.0
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 8.1e-38 162.2 121 62.8
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 1.4e-37 161.4 223 41.3
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 1.4e-37 161.4 223 41.3
SpUn0490_0010 Schrenkiella parvula HOM05D005972 ORTHO05D007548 9.9e-36 155.2 124 58.1
Sp7g13170 Schrenkiella parvula HOM05D005972 ORTHO05D007548 6.4e-35 152.5 171 46.2
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 8.3e-35 152.1 142 54.2
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 1.1e-34 151.8 139 53.2
HanXRQChr15g0481161 Helianthus annuus HOM05D005972 ORTHO05D007548 2.4e-26 124.0 116 51.7
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 3.9e-24 116.7 379 27.2
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 3.9e-24 116.7 375 29.1
CBR_g51824 Chara braunii HOM05D005972 ORTHO05D007548 3.1e-21 107.1 350 24.9
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 1.5e-20 104.8 104 56.7
CSS0032497 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D007548 1.7e-16 91.3 82 54.9
Zm00001eb076720 Zea mays HOM05D005972 ORTHO05D007548 3.1e-13 80.5 115 45.2
A05p16910 Brassica napus HOM05D005972 ORTHO05D007548 7.6e-12 75.9 54 64.8
COL.COLO4_10012 Corchorus olitorius HOM05D005972 ORTHO05D007548 1.9e-10 71.2 74 48.6
CAN.G730.12 Capsicum annuum HOM05D005972 ORTHO05D007548 5.4e-10 69.7 48 72.9
CAN.G730.21 Capsicum annuum HOM05D005972 ORTHO05D007548 1.8e-08 64.7 46 71.7
CDE08G1644 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 3.0e-08 63.9 58 56.9
CSS0030864 Camellia sinensis var. sinensis HOM05D000451 ORTHO05D000351 1.5e-07 61.6 80 41.2
CAN.G1940.2 Capsicum annuum HOM05D005972 ORTHO05D007548 1.5e-07 61.6 45 62.2
COL.COLO4_29892 Corchorus olitorius HOM05D005972 ORTHO05D007548 5.6e-07 59.7 53 52.8
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 9.6e-07 58.9 43 65.1


User provided reference genes

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