Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1994 Papaver somniferum HOM05D004773 ORTHO05D005943 1.7e-160 569.3 293 100.0
PSO063G3794 Papaver somniferum HOM05D004773 ORTHO05D005943 3.2e-111 405.6 306 67.3
Aqoxy5G04203 Aquilegia oxysepala HOM05D004773 ORTHO05D005943 6.3e-99 364.8 299 59.9
Nn2g15176 Nelumbo nucifera HOM05D004773 ORTHO05D005943 1.5e-95 353.6 310 59.0
MBI04_g12483_MAGBIO Magnolia biondii HOM05D004773 ORTHO05D005943 1.9e-95 353.2 318 56.3
ECA234G0571 Erigeron canadensis HOM05D000140 ORTHO05D000087 1.5e-92 343.6 282 59.2
TAR317G0002 Trochodendron aralioides HOM05D004773 ORTHO05D005943 4.4e-92 342.0 310 56.5
THA.LOC104802900 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 5.7e-92 341.7 282 61.3
vmacro15870 Vaccinium macrocarpon HOM05D004773 ORTHO05D005943 2.2e-91 339.7 291 57.7
Actinidia11804 Actinidia chinensis HOM05D004773 ORTHO05D005943 3.7e-91 339.0 294 56.8
ECA234G3816 Erigeron canadensis HOM05D004773 ORTHO05D005943 3.7e-91 339.0 289 58.1
Lj1P1212T41 Lonicera japonica HOM05D004773 ORTHO05D005943 1.8e-90 336.7 293 56.7
Rhsim02G0120400 Rhododendron simsii HOM05D000873 ORTHO05D002948 1.8e-90 336.7 291 58.8
Atru.chr2.1725 Acer truncatum HOM05D004773 ORTHO05D005943 7.0e-90 334.7 310 55.2
Ciclev10032178m.g Citrus clementina HOM05D004773 ORTHO05D005943 1.2e-89 334.0 309 54.7
AUR62014736 Chenopodium quinoa HOM05D004773 ORTHO05D005943 1.6e-89 333.6 308 53.9
AUR62016916 Chenopodium quinoa HOM05D004773 ORTHO05D005943 3.5e-89 332.4 307 53.7
Eucgr.F01970 Eucalyptus grandis HOM05D004773 ORTHO05D005943 7.8e-89 331.3 290 54.5
Hma1.2p1_0144F.1_g064840 Hydrangea macrophylla HOM05D004773 ORTHO05D005943 1.0e-88 330.9 291 56.0
QL09p005927 Quercus lobata HOM05D004773 ORTHO05D005943 1.0e-88 330.9 305 54.1
Hund21271 Selenicereus undatus HOM05D004773 ORTHO05D005943 1.0e-88 330.9 307 52.8
ATR0620G003 Amborella trichopoda HOM05D004773 ORTHO05D005943 1.3e-88 330.5 286 58.0
Aa31LG5G14030 Aethionema arabicum HOM05D004773 ORTHO05D005943 2.9e-88 329.3 266 60.2
Cc02_g14730 Coffea canephora HOM05D004773 ORTHO05D005943 8.6e-88 327.8 291 56.0
Duzib177G1208 Durio zibethinus HOM05D004773 ORTHO05D005943 8.6e-88 327.8 270 58.5
Lsat_1_v5_gn_4_57340 Lactuca sativa HOM05D004773 ORTHO05D005943 8.6e-88 327.8 283 55.8
HanXRQChr17g0555701 Helianthus annuus HOM05D004773 ORTHO05D005943 1.5e-87 327.0 288 55.9
SalBow8G5056 Salvia bowleyana HOM05D004773 ORTHO05D005943 1.5e-87 327.0 286 57.3
CDE07G0301 Ceratophyllum demersum HOM05D004773 ORTHO05D005943 1.9e-87 326.6 301 54.8
Thecc.05G229300 Theobroma cacao HOM05D004773 ORTHO05D005943 1.9e-87 326.6 310 53.9
Cc02_g12570 Coffea canephora HOM05D004773 ORTHO05D005943 2.5e-87 326.2 300 53.7
Thecc.05G229900 Theobroma cacao HOM05D004773 ORTHO05D005943 4.3e-87 325.5 271 57.6
CiPaw.05G210200 Carya illinoinensis HOM05D004773 ORTHO05D005943 5.6e-87 325.1 309 53.4
Haze_00339 Corylus avellana HOM05D004773 ORTHO05D005943 1.2e-86 323.9 309 53.1
MSTRG.7300 Avicennia marina HOM05D004773 ORTHO05D005943 1.6e-86 323.6 294 56.5
Cfa016123 Carpinus fangiana HOM05D004773 ORTHO05D005943 2.1e-86 323.2 309 53.1
HanXRQChr12g0364651 Helianthus annuus HOM05D004773 ORTHO05D005943 2.8e-86 322.8 281 57.7
MD15G1141100 Malus domestica HOM05D004773 ORTHO05D005943 2.8e-86 322.8 294 55.1
Duzib128G1941 Durio zibethinus HOM05D004773 ORTHO05D005943 3.6e-86 322.4 310 53.2
Migut.M01200 Erythranthe guttata HOM05D004773 ORTHO05D005943 3.6e-86 322.4 292 56.8
Oeu053928.1 Olea europaea HOM05D004773 ORTHO05D005943 3.6e-86 322.4 311 52.4
Carub.0006s1581 Capsella rubella HOM05D004773 ORTHO05D005943 4.7e-86 322.0 305 52.5
FAN14G4391 Fragaria x ananassa HOM05D004773 ORTHO05D005943 4.7e-86 322.0 269 57.2
TWI32G1059 Tripterygium wilfordii HOM05D004773 ORTHO05D005943 6.1e-86 321.6 309 52.1
Gohir.D11G235500 Gossypium hirsutum HOM05D004773 ORTHO05D005943 8.0e-86 321.2 306 52.3
Solyc02g078980.3 Solanum lycopersicum HOM05D004773 ORTHO05D005943 8.0e-86 321.2 303 54.5
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.0e-85 320.9 273 56.8
AT5G17570 Arabidopsis thaliana HOM05D004773 ORTHO05D005943 1.4e-85 320.5 305 52.1
Sopen02g023790 Solanum pennellii HOM05D004773 ORTHO05D005943 1.8e-85 320.1 303 54.5
Manes.08G158200 Manihot esculenta HOM05D004773 ORTHO05D005943 2.3e-85 319.7 311 52.7
AL3G12620 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 3.1e-85 319.3 270 58.9
A06p26410 Brassica napus HOM05D004773 ORTHO05D005943 3.1e-85 319.3 267 59.2
BNapus_Darmor_BZH_scaffold_78p00160 Brassica napus HOM05D004773 ORTHO05D005943 3.1e-85 319.3 267 59.2
Gorai.007G248200 Gossypium raimondii HOM05D004773 ORTHO05D005943 3.1e-85 319.3 306 52.0
FAN05G1629 Fragaria x ananassa HOM05D004773 ORTHO05D005943 4.0e-85 318.9 269 57.2
Nitab4.5_0005399g0010 Nicotiana tabacum HOM05D004773 ORTHO05D005943 4.0e-85 318.9 307 52.8
Potri.013G073800 Populus trichocarpa HOM05D004773 ORTHO05D005943 4.0e-85 318.9 293 56.0
FAN02G0119 Fragaria x ananassa HOM05D004773 ORTHO05D005943 5.2e-85 318.5 269 57.2
FAN09G4020 Fragaria x ananassa HOM05D004773 ORTHO05D005943 5.2e-85 318.5 269 57.2
FAN14G1019 Fragaria x ananassa HOM05D004773 ORTHO05D005943 5.2e-85 318.5 269 57.2
Lj2g0008141 Lotus japonicus HOM05D004773 ORTHO05D005943 5.2e-85 318.5 310 52.3
Cpa.g.sc73.89 Carica papaya HOM05D004773 ORTHO05D005943 8.9e-85 317.8 306 53.3
FvH4_6g14060 Fragaria vesca HOM05D004773 ORTHO05D005943 8.9e-85 317.8 269 56.5
arahy.Tifrunner.gnm1.ann1.WJU3K5 Arachis hypogaea HOM05D004773 ORTHO05D005943 1.2e-84 317.4 310 53.9
Eucgr.F01964 Eucalyptus grandis HOM05D004773 ORTHO05D005943 1.2e-84 317.4 291 53.6
C09p59580 Brassica napus HOM05D004773 ORTHO05D005943 1.5e-84 317.0 316 50.9
Thhalv10014121m.g Eutrema salsugineum HOM05D004773 ORTHO05D005943 1.5e-84 317.0 301 52.8
FvH4_6g13930 Fragaria vesca HOM05D004773 ORTHO05D005943 1.5e-84 317.0 269 57.2
FAN05G3354 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.0e-84 316.6 269 56.9
Nitab4.5_0003676g0020 Nicotiana tabacum HOM05D004773 ORTHO05D005943 2.0e-84 316.6 308 51.9
AL6G28660 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 2.6e-84 316.2 305 51.1
BcaC04g18778 Brassica carinata HOM05D004773 ORTHO05D005943 2.6e-84 316.2 302 52.6
BolC9t58797H Brassica oleracea HOM05D004773 ORTHO05D005943 2.6e-84 316.2 302 52.6
Gohir.D13G163600 Gossypium hirsutum HOM05D004773 ORTHO05D005943 2.6e-84 316.2 270 56.3
SGA_v2.0_scaffold114G31969 Striga asiatica HOM05D004773 ORTHO05D005943 3.4e-84 315.8 276 56.9
BcaB08g36761 Brassica carinata HOM05D004773 ORTHO05D005943 4.4e-84 315.5 307 52.1
FAN09G3809 Fragaria x ananassa HOM05D004773 ORTHO05D005943 4.4e-84 315.5 269 56.5
THA.LOC104802901 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 4.4e-84 315.5 310 52.3
PGSC0003DMG400022363 Solanum tuberosum HOM05D004773 ORTHO05D005943 5.8e-84 315.1 307 52.8
BNapus_Darmor_BZH_scaffold_162p00180 Brassica napus HOM05D004773 ORTHO05D005943 7.5e-84 314.7 268 59.0
BolC1t05828H Brassica oleracea HOM05D004773 ORTHO05D005943 7.5e-84 314.7 268 59.0
BraA01t04577Z Brassica rapa HOM05D004773 ORTHO05D005943 9.8e-84 314.3 269 58.7
Medtr6g033025 Medicago truncatula HOM05D004773 ORTHO05D005943 9.8e-84 314.3 310 51.6
Sc17g0006500 Simmondsia chinensis HOM05D004773 ORTHO05D005943 9.8e-84 314.3 304 52.0
Carub.0003s0264 Capsella rubella HOM05D004773 ORTHO05D005943 1.7e-83 313.5 270 57.0
Sp6g26650 Schrenkiella parvula HOM05D004773 ORTHO05D005943 1.7e-83 313.5 306 52.9
HPP92_001431 Vanilla planifolia HOM05D004773 ORTHO05D005943 2.2e-83 313.2 300 52.0
Prupe.7G272000 Prunus persica HOM05D004773 ORTHO05D005943 4.9e-83 312.0 294 54.1
Peaxi162Scf00527g00065 Petunia axillaris HOM05D004773 ORTHO05D005943 8.3e-83 311.2 308 51.3
CANSAT01G2664 Cannabis sativa HOM05D004773 ORTHO05D005943 1.1e-82 310.8 281 55.2
Zm00001eb073330 Zea mays HOM05D004773 ORTHO05D005943 1.4e-82 310.5 297 53.2
Psat1g096800 Pisum sativum HOM05D004773 ORTHO05D005943 1.9e-82 310.1 300 52.3
Gohir.A13G158600 Gossypium hirsutum HOM05D004773 ORTHO05D005943 2.4e-82 309.7 270 55.6
PSO782G1422 Papaver somniferum HOM05D004773 ORTHO05D005943 2.4e-82 309.7 196 75.5
A10p21830 Brassica napus HOM05D004773 ORTHO05D008759 3.2e-82 309.3 300 51.3
GSVIVG01019376001 Vitis vinifera HOM05D004773 ORTHO05D005943 4.1e-82 308.9 292 53.4
Os04g0577500 Oryza sativa ssp. japonica HOM05D004773 ORTHO05D005943 5.4e-82 308.5 298 52.0
DCAR_024890 Daucus carota HOM05D004773 ORTHO05D005943 7.0e-82 308.1 311 49.5
Ca_04503_v3 Cicer arietinum L. HOM05D004773 ORTHO05D005943 9.2e-82 307.8 310 51.0
Sabra13G0063900 Salix brachista HOM05D004773 ORTHO05D008759 1.2e-81 307.4 294 54.1
Lalb_Chr06g0173871 Lupinus albus HOM05D004773 ORTHO05D005943 1.6e-81 307.0 308 50.0
HPP92_001439 Vanilla planifolia HOM05D004773 ORTHO05D005943 3.5e-81 305.8 300 50.7
CsaV3_3G010040 Cucumis sativus L. HOM05D004773 ORTHO05D005943 4.6e-81 305.4 303 49.8
Aa31LG11G12090 Aethionema arabicum HOM05D004773 ORTHO05D005943 7.8e-81 304.7 290 53.1
MELO3C006226.2 Cucumis melo HOM05D004773 ORTHO05D005943 1.0e-80 304.3 303 49.8
CAN.G1181.18 Capsicum annuum HOM05D004773 ORTHO05D005943 1.3e-80 303.9 307 51.5
FAN09G2979 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.3e-80 303.9 270 54.8
Gorai.013G199600 Gossypium raimondii HOM05D004773 ORTHO05D005943 2.3e-80 303.1 270 54.8
PGR102G2546 Punica granatum HOM05D004773 ORTHO05D005943 8.6e-80 301.2 281 53.0
Gohir.A11G222000 Gossypium hirsutum HOM05D004773 ORTHO05D005943 3.6e-78 295.8 213 63.4
BcaC09g47749 Brassica carinata HOM05D004773 ORTHO05D005943 3.4e-76 289.3 281 53.0
Glyma.16G151100 Glycine max HOM05D004773 ORTHO05D005943 3.4e-76 289.3 264 54.2
AUR62012595 Chenopodium quinoa HOM05D004773 ORTHO05D005943 4.4e-76 288.9 221 59.3
Phvul.004G078000 Phaseolus vulgaris HOM05D004773 ORTHO05D005943 1.1e-74 284.3 215 60.0
ClCG05G002600 Citrullus lanatus HOM05D004773 ORTHO05D005943 1.2e-73 280.8 351 42.7
Sed0007971 Sechium edule HOM05D004773 ORTHO05D005943 2.3e-72 276.6 217 56.7
FAN02G4326 Fragaria x ananassa HOM05D004773 ORTHO05D005943 5.6e-71 271.9 207 60.9
arahy.Tifrunner.gnm1.ann1.KNV4WG Arachis hypogaea HOM05D004773 ORTHO05D005943 2.1e-70 270.0 287 51.9
Pp3c12_11300 Physcomitrium patens HOM05D004773 ORTHO05D005943 2.1e-70 270.0 310 43.2
SHI39094 Sapria himalayana HOM05D004773 ORTHO05D005943 1.4e-69 267.3 318 45.0
AT3G03500 Arabidopsis thaliana HOM05D004773 ORTHO05D005943 4.4e-68 262.3 197 62.4
CARHR195610 Cardamine hirsuta HOM05D004773 ORTHO05D005943 8.3e-67 258.1 257 50.6
AagrBONN_evm.TU.Sc2ySwM_362.2127 Anthoceros agrestis HOM05D004773 ORTHO05D005943 1.1e-66 257.7 279 46.6
AUR62014585 Chenopodium quinoa HOM05D004773 ORTHO05D005943 7.1e-66 255.0 307 45.6
Thhalv10021316m.g Eutrema salsugineum HOM05D004773 ORTHO05D005943 7.1e-66 255.0 221 59.7
SMO367G0365 Selaginella moellendorffii HOM05D004773 ORTHO05D005943 2.7e-65 253.1 292 44.2
AUR62014597 Chenopodium quinoa HOM05D004773 ORTHO05D005943 1.1e-61 241.1 214 53.3
TPR.G6097 Trifolium pratense HOM05D004773 ORTHO05D005943 8.9e-61 238.0 321 44.9
Dinv40507 Davidia involucrata HOM05D004773 ORTHO05D005943 9.9e-60 234.6 308 45.8
Mapoly0004s0110 Marchantia polymorpha HOM05D004773 ORTHO05D005943 2.9e-59 233.0 313 41.9
CBR_g32162 Chara braunii HOM05D004773 ORTHO05D001111 1.2e-57 227.6 312 40.7
unitig_37.g12340 Utricularia gibba HOM05D004773 ORTHO05D005943 9.3e-50 201.4 150 60.7
Sp3g02490 Schrenkiella parvula HOM05D004773 ORTHO05D005943 1.1e-47 194.5 305 40.7
COL.COLO4_31150 Corchorus olitorius HOM05D004773 ORTHO05D005943 1.9e-47 193.7 145 60.0
VMungo0464G1467 Vigna mungo HOM05D004773 ORTHO05D005943 1.2e-41 174.5 171 46.8
CAN.G1247.2 Capsicum annuum HOM05D004773 ORTHO05D005943 4.6e-33 146.0 217 40.6
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 2.9e-27 126.7 149 43.6
VMungo0464G0773 Vigna mungo HOM05D004773 ORTHO05D005943 5.5e-26 122.5 159 46.5
RcHm_v2.0_Chr3g0466941 Rosa chinensis HOM05D004773 ORTHO05D005943 7.1e-26 122.1 125 50.4
Cre17.g717200 Chlamydomonas reinhardtii HOM05D004773 ORTHO05D005943 6.7e-24 115.5 301 29.6
PRCOL_00005876 Prasinoderma coloniale HOM05D004773 ORTHO05D005943 4.3e-23 112.8 272 29.8
HPP92_010162 Vanilla planifolia HOM05D004773 ORTHO05D005943 1.1e-21 108.2 79 59.5
Cre03.g169800 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D005943 9.0e-21 105.1 276 27.9
MCO10G115 Micromonas commoda HOM05D004773 ORTHO05D005943 1.9e-18 97.4 279 26.5
AL6G10940 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 8.8e-16 88.6 71 60.6
SEGI_00738 Sequoiadendron giganteum HOM05D004773 ORTHO05D005943 8.8e-16 88.6 67 61.2
Cre10.g429601 Chlamydomonas reinhardtii HOM05D004773 ORTHO05D139820 9.1e-13 78.6 161 28.6
PGSC0003DMG400004239 Solanum tuberosum HOM05D004773 ORTHO05D005943 2.9e-11 73.6 50 68.0
AL3G13200 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 2.7e-09 67.0 49 61.2
TPR.G35071 Trifolium pratense HOM05D004773 ORTHO05D005943 1.5e-07 61.2 52 50.0
MCO10G056 Micromonas commoda HOM05D005131 ORTHO05D006645 2.6e-07 60.5 202 25.2
PRCOL_00003277 Prasinoderma coloniale HOM05D005131 ORTHO05D006645 3.3e-07 60.1 191 29.3
Cre02.g085650 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D006645 9.7e-07 58.5 125 32.8
SEGI_21507 Sequoiadendron giganteum HOM05D005131 ORTHO05D006645 3.7e-06 56.6 232 25.0


User provided reference genes

Program Settings