Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1934 Papaver somniferum HOM05D005888 ORTHO05D007791 0.0e+00 1081.2 559 100.0
PSO782G2046 Papaver somniferum HOM05D005888 ORTHO05D007791 1.9e-301 1038.5 521 99.0
Nn4g22357 Nelumbo nucifera HOM05D005888 ORTHO05D007791 6.4e-217 757.7 464 77.6
Aqoxy5G03414 Aquilegia oxysepala HOM05D005888 ORTHO05D007791 1.9e-213 746.1 450 78.0
GSVIVG01033109001 Vitis vinifera HOM05D005888 ORTHO05D007791 1.2e-212 743.4 458 77.5
Dinv33348 Davidia involucrata HOM05D005888 ORTHO05D007791 3.6e-212 741.9 447 78.3
QL02p071659 Quercus lobata HOM05D005888 ORTHO05D007791 1.7e-209 733.0 456 75.9
Actinidia05914 Actinidia chinensis HOM05D005888 ORTHO05D007791 2.3e-206 722.6 451 75.6
TWI36G1634 Tripterygium wilfordii HOM05D005888 ORTHO05D007791 2.3e-206 722.6 451 75.6
Gorai.011G091800 Gossypium raimondii HOM05D005888 ORTHO05D007791 3.0e-206 722.2 453 75.9
Prupe.3G304500 Prunus persica HOM05D005888 ORTHO05D007791 6.6e-206 721.1 454 75.6
ECA238G1812 Erigeron canadensis HOM05D005888 ORTHO05D001226 1.5e-205 719.9 516 68.0
Potri.001G331900 Populus trichocarpa HOM05D005888 ORTHO05D007791 1.5e-205 719.9 497 71.0
RcHm_v2.0_Chr2g0175381 Rosa chinensis HOM05D005888 ORTHO05D007791 5.6e-205 718.0 451 74.9
Thecc.04G034400 Theobroma cacao HOM05D005888 ORTHO05D007791 1.3e-204 716.8 498 71.9
MD09G1012500 Malus domestica HOM05D005888 ORTHO05D007791 1.6e-204 716.5 450 75.3
Ciclev10014957m.g Citrus clementina HOM05D005888 ORTHO05D007791 3.6e-204 715.3 452 75.9
Manes.15G159600 Manihot esculenta HOM05D005888 ORTHO05D007791 4.8e-204 714.9 448 75.4
CiPaw.03G054300 Carya illinoinensis HOM05D005888 ORTHO05D007791 9.0e-203 710.7 451 74.7
CsaV3_3G027150 Cucumis sativus L. HOM05D005888 ORTHO05D007791 9.0e-203 710.7 492 68.9
FvH4_6g53250 Fragaria vesca HOM05D005888 ORTHO05D007791 9.0e-203 710.7 447 74.0
Gohir.D10G084400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 1.5e-202 709.9 453 75.5
arahy.Tifrunner.gnm1.ann1.BEVL6N Arachis hypogaea HOM05D005888 ORTHO05D007791 2.0e-202 709.5 453 75.1
MELO3C014874.2 Cucumis melo HOM05D005888 ORTHO05D007791 3.4e-202 708.8 495 68.5
Gohir.A10G159400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 5.8e-202 708.0 447 75.4
Glyma.16G057700 Glycine max HOM05D005888 ORTHO05D007791 7.6e-202 707.6 452 73.5
arahy.Tifrunner.gnm1.ann1.269ICV Arachis hypogaea HOM05D005888 ORTHO05D007791 9.9e-202 707.2 453 75.1
Phvul.001G094800 Phaseolus vulgaris HOM05D005888 ORTHO05D007791 1.7e-201 706.4 451 73.2
Lalb_Chr22g0360441 Lupinus albus HOM05D005888 ORTHO05D007791 4.9e-201 704.9 454 72.9
Hma1.2p1_0279F.1_g112650 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 1.1e-200 703.7 436 75.0
Solyc03g005010.4 Solanum lycopersicum HOM05D005888 ORTHO05D007791 1.1e-200 703.7 451 73.2
DCAR_021782 Daucus carota HOM05D005888 ORTHO05D007791 1.9e-200 703.0 506 67.8
Sed0023439 Sechium edule HOM05D005888 ORTHO05D007791 1.9e-200 703.0 508 67.5
Lsat_1_v5_gn_2_94140 Lactuca sativa HOM05D005888 ORTHO05D007791 2.4e-200 702.6 460 72.4
Sopen03g001020 Solanum pennellii HOM05D005888 ORTHO05D007791 2.4e-200 702.6 451 72.9
CANSAT64G1138 Cannabis sativa HOM05D005888 ORTHO05D007791 5.4e-200 701.4 447 72.0
Atru.chr6.2546 Acer truncatum HOM05D005888 ORTHO05D007791 1.2e-199 700.3 452 74.1
Atru.chr6.2554 Acer truncatum HOM05D005888 ORTHO05D007791 1.2e-199 700.3 452 74.3
MSTRG.15566 Avicennia marina HOM05D005888 ORTHO05D007791 1.2e-199 700.3 448 73.2
Eucgr.J02331 Eucalyptus grandis HOM05D005888 ORTHO05D007791 2.7e-199 699.1 444 72.7
Sc03g0006610 Simmondsia chinensis HOM05D005888 ORTHO05D007791 6.0e-199 698.0 451 72.1
Lju41C52T2 Lonicera japonica HOM05D005888 ORTHO05D007791 7.9e-199 697.6 502 68.7
Medtr7g029350 Medicago truncatula HOM05D005888 ORTHO05D007791 2.3e-198 696.0 520 66.3
Lj1g0026523 Lotus japonicus HOM05D005888 ORTHO05D007791 8.7e-198 694.1 455 71.2
SalBow7G4553 Salvia bowleyana HOM05D005888 ORTHO05D007791 4.8e-196 688.3 453 71.5
ClCG05G013410 Citrullus lanatus HOM05D005888 ORTHO05D007791 6.2e-196 688.0 538 64.3
Rhsim10G0007200 Rhododendron simsii HOM05D005888 ORTHO05D007791 1.1e-195 687.2 493 68.6
Cpa.g.sc171.27 Carica papaya HOM05D005888 ORTHO05D007791 1.4e-195 686.8 448 71.9
PGSC0003DMG400013424 Solanum tuberosum HOM05D005888 ORTHO05D007791 1.4e-195 686.8 472 68.9
ATR0561G016 Amborella trichopoda HOM05D005888 ORTHO05D007791 3.1e-195 685.6 489 67.9
AT3G27180 Arabidopsis thaliana HOM05D005888 ORTHO05D007791 6.9e-195 684.5 454 70.5
THA.LOC104823976 Tarenaya hassleriana HOM05D005888 ORTHO05D007791 6.9e-195 684.5 448 72.3
CARHR148380 Cardamine hirsuta HOM05D005888 ORTHO05D007791 1.2e-194 683.7 450 70.7
Sp2g16300 Schrenkiella parvula HOM05D005888 ORTHO05D007791 2.6e-194 682.6 454 70.7
AL5G16294 Arabidopsis lyrata HOM05D005888 ORTHO05D007791 7.6e-194 681.0 467 68.5
TPR.G38314 Trifolium pratense HOM05D005888 ORTHO05D007791 7.6e-194 681.0 446 72.0
Carub.0005s0545 Capsella rubella HOM05D005888 ORTHO05D007791 9.9e-194 680.6 492 67.3
HanXRQChr14g0450691 Helianthus annuus HOM05D005888 ORTHO05D007791 8.4e-193 677.6 523 64.8
A06p41440 Brassica napus HOM05D005888 ORTHO05D007791 1.1e-192 677.2 459 69.7
Cc07_g00720 Coffea canephora HOM05D005888 ORTHO05D007791 3.2e-192 675.6 489 65.8
PGR083G0577 Punica granatum HOM05D005888 ORTHO05D007791 7.1e-192 674.5 489 66.1
C07p36200 Brassica napus HOM05D005888 ORTHO05D007791 1.2e-191 673.7 463 68.9
BolC7t44136H Brassica oleracea HOM05D005888 ORTHO05D007791 1.2e-191 673.7 459 69.3
BraA06t27070Z Brassica rapa HOM05D005888 ORTHO05D007791 1.6e-191 673.3 452 70.1
Nitab4.5_0000559g0440 Nicotiana tabacum HOM05D005888 ORTHO05D007791 2.7e-191 672.5 535 63.4
Migut.K01458 Erythranthe guttata HOM05D005888 ORTHO05D007791 1.8e-190 669.8 458 69.4
Aa31LG2G5450 Aethionema arabicum HOM05D005888 ORTHO05D007791 3.9e-190 668.7 450 70.4
Thhalv10003965m.g Eutrema salsugineum HOM05D005888 ORTHO05D007791 1.1e-189 667.2 483 67.1
Sabra16G0212900 Salix brachista HOM05D005888 ORTHO05D007791 1.5e-189 666.8 528 64.8
EL10Ac5g11325 Beta vulgaris HOM05D005888 ORTHO05D007791 9.6e-189 664.1 504 64.1
FAN05G3931 Fragaria x ananassa HOM05D005888 ORTHO05D007791 4.0e-187 658.7 455 69.2
Cfa007240 Carpinus fangiana HOM05D005888 ORTHO05D007791 6.9e-187 657.9 450 70.2
FAN02G1540 Fragaria x ananassa HOM05D005888 ORTHO05D007791 2.7e-183 646.0 472 66.5
Oeu011755.2 Olea europaea HOM05D005888 ORTHO05D007791 2.3e-182 642.9 463 67.4
vmacro05950 Vaccinium macrocarpon HOM05D005888 ORTHO05D007791 4.8e-180 635.2 461 67.0
HPP92_006968 Vanilla planifolia HOM05D005888 ORTHO05D007791 1.1e-179 634.0 480 62.3
BcaC06g33851 Brassica carinata HOM05D005888 ORTHO05D007791 5.3e-179 631.7 454 66.1
Peaxi162Scf00700g00115 Petunia axillaris HOM05D005888 ORTHO05D007791 1.3e-177 627.1 437 69.1
AUR62034780 Chenopodium quinoa HOM05D005888 ORTHO05D007791 1.1e-176 624.0 518 61.2
SGA_v2.0_scaffold47G17585 Striga asiatica HOM05D005888 ORTHO05D000781 1.6e-175 620.2 473 64.3
Psat3g164600 Pisum sativum HOM05D005888 ORTHO05D007791 2.1e-175 619.8 397 73.8
COL.COLO4_17186 Corchorus olitorius HOM05D005888 ORTHO05D007791 3.3e-173 612.5 402 72.6
FAN14G3555 Fragaria x ananassa HOM05D005888 ORTHO05D007791 3.3e-173 612.5 447 66.0
CDE05G3258 Ceratophyllum demersum HOM05D005888 ORTHO05D007791 2.8e-172 609.4 455 64.6
Zm00001eb364480 Zea mays HOM05D005888 ORTHO05D007791 8.2e-172 607.8 447 62.9
Nitab4.5_0005161g0030 Nicotiana tabacum HOM05D005888 ORTHO05D007791 4.8e-164 582.0 463 62.6
Duzib187G0894 Durio zibethinus HOM05D005888 ORTHO05D007791 7.4e-157 558.1 496 58.9
Pp3c10_19430 Physcomitrium patens HOM05D005888 ORTHO05D007791 1.0e-150 537.7 452 56.9
TAR374G0091 Trochodendron aralioides HOM05D005888 ORTHO05D007791 9.1e-147 524.6 304 82.6
Mapoly0035s0136 Marchantia polymorpha HOM05D005888 ORTHO05D007791 5.9e-146 521.9 447 55.0
Haze_14860 Corylus avellana HOM05D005888 ORTHO05D007791 1.7e-140 503.8 452 57.7
CAN.G1751.4 Capsicum annuum HOM05D005888 ORTHO05D007791 2.8e-140 503.1 324 73.8
SMO364G0044 Selaginella moellendorffii HOM05D005888 ORTHO05D007791 2.8e-140 503.1 434 54.4
Hma1.2p1_0279F.1_g112640 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 1.4e-139 500.7 313 75.7
FAN05G4989 Fragaria x ananassa HOM05D005888 ORTHO05D007791 2.8e-135 486.5 345 70.1
Ca_11801_v3 Cicer arietinum L. HOM05D005888 ORTHO05D007791 1.4e-126 457.6 340 68.5
AUR62009505 Chenopodium quinoa HOM05D005888 ORTHO05D007791 3.7e-124 449.5 387 58.1
Os01g0920300 Oryza sativa ssp. japonica HOM05D005888 ORTHO05D007791 3.4e-117 426.4 300 64.7
Actinidia36191 Actinidia chinensis HOM05D005888 ORTHO05D007791 5.8e-117 425.6 266 77.4
AagrBONN_evm.TU.Sc2ySwM_344.2002 Anthoceros agrestis HOM05D005888 ORTHO05D007791 4.1e-115 419.5 402 49.8
CBR_g38076 Chara braunii HOM05D005888 ORTHO05D007791 1.0e-105 388.3 409 47.2
VMungo1383G0859 Vigna mungo HOM05D005888 ORTHO05D007791 3.5e-98 363.2 240 72.1
AUR62044347 Chenopodium quinoa HOM05D005888 ORTHO05D007791 3.6e-95 353.2 388 50.8
VMungo1383G0786 Vigna mungo HOM05D005888 ORTHO05D007791 5.1e-89 332.8 220 69.5
Ah.11g046710 Amaranthus hybridus HOM05D005888 ORTHO05D007791 1.2e-82 311.6 527 37.6
Atru.chr6.2542 Acer truncatum HOM05D005888 ORTHO05D007791 1.3e-79 301.6 230 63.0
BcaC06g31013 Brassica carinata HOM05D005888 ORTHO05D007791 3.4e-77 293.5 211 66.4
CSS0026485 Camellia sinensis var. sinensis HOM05D005888 ORTHO05D007791 2.1e-71 274.2 213 63.8
MCO16G034 Micromonas commoda HOM05D005888 ORTHO05D007791 1.9e-64 251.1 505 34.3
FAN09G0079 Fragaria x ananassa HOM05D000071 ORTHO05D007791 1.8e-49 201.4 159 59.1
Ca_27688_v3 Cicer arietinum L. HOM05D005888 ORTHO05D007791 2.9e-36 157.5 128 58.6
PRCOL_00001844 Prasinoderma coloniale HOM05D005888 ORTHO05D007791 3.6e-34 150.6 448 29.9
Atru.chr6.2543 Acer truncatum HOM05D005888 ORTHO05D007791 2.2e-28 131.3 86 75.6
RcHm_v2.0_Chr7g0179331 Rosa chinensis HOM05D005888 ORTHO05D007791 2.1e-26 124.8 93 64.5
Cre13.g578012 Chlamydomonas reinhardtii HOM05D005888 ORTHO05D007791 2.8e-23 114.4 378 25.4
GSVIVG01033112001 Vitis vinifera HOM05D005888 ORTHO05D007791 5.0e-20 103.6 65 73.8
Pp3s32_330 Physcomitrium patens HOM05D005216 ORTHO05D006453 5.5e-19 100.1 358 26.0
SEGI_20285 Sequoiadendron giganteum HOM05D005888 ORTHO05D007791 2.8e-18 97.8 73 60.3
GSVIVG01006690001 Vitis vinifera HOM05D005888 ORTHO05D007791 3.6e-18 97.4 103 49.5
Cre13.g578201 Chlamydomonas reinhardtii HOM05D005888 ORTHO05D007791 4.7e-18 97.1 175 32.6
BcaNung06416 Brassica carinata HOM05D005888 ORTHO05D007791 1.7e-12 78.6 57 56.1
GSVIVG01006789001 Vitis vinifera HOM05D005888 ORTHO05D007791 1.7e-12 78.6 78 55.1
MD17G1013100 Malus domestica HOM05D005888 ORTHO05D007791 2.5e-11 74.7 71 47.9
GSVIVG01033118001 Vitis vinifera HOM05D005888 ORTHO05D007791 4.7e-10 70.5 93 40.9
RcHm_v2.0_Chr7g0239971 Rosa chinensis HOM05D005888 ORTHO05D007791 2.0e-08 65.1 40 65.0
FAN18G4156 Fragaria x ananassa HOM05D005888 ORTHO05D045398 4.1e-06 57.4 94 35.1


User provided reference genes

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