Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 6.5e-91 337.4 176 100.0
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 5.9e-84 314.3 174 93.7
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 1.0e-83 313.5 176 93.2
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 5.3e-77 291.2 176 88.1
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 1.7e-62 243.0 145 89.0
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 2.9e-59 232.3 172 73.8
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 1.1e-58 230.3 171 73.7
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 1.6e-57 226.5 174 71.3
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 1.4e-56 223.4 173 70.5
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 2.0e-55 219.5 177 66.1
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 2.6e-55 219.2 177 65.5
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 5.7e-55 218.0 169 66.3
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 7.5e-55 217.6 176 65.3
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 7.5e-55 217.6 167 68.3
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.8e-53 213.0 176 64.8
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 2.4e-53 212.6 176 66.5
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 7.0e-53 211.1 172 64.5
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 9.2e-53 210.7 176 64.8
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 9.2e-53 210.7 172 64.5
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 4.6e-52 208.4 174 65.5
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 5.9e-52 208.0 171 63.2
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 7.8e-52 207.6 175 62.9
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.3e-51 206.8 173 65.3
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 2.3e-51 206.1 176 63.6
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 3.0e-51 205.7 176 59.7
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 3.0e-51 205.7 176 61.4
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 5.0e-51 204.9 173 61.8
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 6.6e-51 204.5 176 60.8
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 8.6e-51 204.1 165 66.7
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.5e-50 203.4 176 61.9
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 1.9e-50 203.0 171 63.2
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 1.9e-50 203.0 165 66.7
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 1.9e-50 203.0 172 61.6
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 2.5e-50 202.6 164 65.2
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 4.3e-50 201.8 169 61.5
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 5.6e-50 201.4 176 57.4
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 7.3e-50 201.1 178 62.4
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 9.5e-50 200.7 176 60.2
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 9.5e-50 200.7 176 58.0
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 1.2e-49 200.3 169 62.7
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.2e-49 200.3 165 63.6
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 1.2e-49 200.3 165 63.6
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 2.1e-49 199.5 171 62.6
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 2.8e-49 199.1 176 59.7
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 3.6e-49 198.7 169 63.9
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 8.0e-49 197.6 163 63.2
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 1.8e-48 196.4 176 59.1
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 1.8e-48 196.4 176 58.0
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 2.3e-48 196.1 165 64.8
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 5.2e-48 194.9 176 59.1
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 8.9e-48 194.1 177 59.3
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 8.9e-48 194.1 174 60.3
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 1.5e-47 193.4 161 65.2
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.5e-47 193.4 168 61.9
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 1.5e-47 193.4 168 61.9
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 1.5e-47 193.4 171 62.0
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 1.5e-47 193.4 164 61.6
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 2.0e-47 193.0 159 61.6
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 2.0e-47 193.0 164 62.8
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 2.6e-47 192.6 174 59.8
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 2.6e-47 192.6 162 61.7
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 2.6e-47 192.6 165 58.8
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 3.4e-47 192.2 162 61.7
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 3.4e-47 192.2 162 61.7
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 4.4e-47 191.8 158 67.1
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 4.4e-47 191.8 168 61.9
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 4.4e-47 191.8 163 60.1
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 7.5e-47 191.0 172 60.5
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 9.8e-47 190.7 167 61.7
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 9.8e-47 190.7 176 57.4
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 9.8e-47 190.7 171 60.2
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.3e-46 190.3 160 58.1
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.3e-46 190.3 158 63.3
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 1.3e-46 190.3 174 57.5
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 2.2e-46 189.5 165 58.8
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 2.9e-46 189.1 165 58.8
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 2.9e-46 189.1 164 59.1
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 4.9e-46 188.3 176 60.2
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 4.9e-46 188.3 172 58.1
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 8.3e-46 187.6 170 58.2
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 1.4e-45 186.8 168 60.1
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 1.9e-45 186.4 172 57.6
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.9e-45 186.4 163 55.8
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 1.9e-45 186.4 163 55.8
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 2.4e-45 186.0 160 58.1
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 2.4e-45 186.0 172 59.3
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 5.4e-45 184.9 166 58.4
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 1.2e-44 183.7 161 57.1
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 1.6e-44 183.3 164 56.7
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 2.7e-44 182.6 139 64.7
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 3.5e-44 182.2 166 56.6
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 5.0e-43 178.3 207 48.8
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 6.6e-43 177.9 165 55.8
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 2.5e-42 176.0 145 65.5
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 3.3e-42 175.6 158 56.3
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 4.3e-42 175.3 109 81.7
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 4.7e-41 171.8 141 65.2
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 6.2e-41 171.4 152 60.5
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 6.2e-41 171.4 227 45.8
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 1.5e-39 166.8 144 61.8
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 2.0e-39 166.4 164 52.4
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 7.5e-39 164.5 162 53.7
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 1.3e-38 163.7 148 60.8
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 3.7e-38 162.2 158 61.4
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 3.2e-37 159.1 150 54.7
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.0e-35 154.1 146 54.8
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 1.5e-34 150.2 134 59.0
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 8.1e-33 144.4 131 61.8
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 4.0e-32 142.1 103 69.9
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.2e-31 140.6 90 77.8
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 7.6e-31 137.9 91 73.6
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 6.4e-30 134.8 135 54.8
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 7.1e-29 131.3 116 58.6
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 2.7e-28 129.4 82 78.0
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 5.1e-27 125.2 156 46.2
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 1.4e-24 117.1 109 56.0
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 6.9e-24 114.8 120 47.5
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.4e-21 107.1 65 80.0
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 2.1e-20 103.2 135 48.1
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 2.7e-20 102.8 116 50.0
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.5e-18 97.1 76 61.8
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 4.3e-18 95.5 52 86.5
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 5.6e-18 95.1 115 46.1
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 3.1e-16 89.4 53 79.2
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 3.1e-16 89.4 50 84.0
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 2.2e-14 83.2 58 69.0
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 9.3e-13 77.8 86 51.2
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.8e-11 73.6 53 67.9
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 2.3e-11 73.2 85 35.3
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.6e-09 67.0 87 49.4
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.6e-09 67.0 87 49.4


User provided reference genes

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