Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1799 Papaver somniferum HOM05D001925 ORTHO05D004257 1.9e-181 639.0 315 100.0
PSO017G3573 Papaver somniferum HOM05D001925 ORTHO05D004257 1.7e-158 562.8 315 90.2
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 2.5e-77 293.1 319 52.4
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 6.9e-75 285.0 310 51.0
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 1.2e-71 274.2 310 48.7
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 6.0e-71 271.9 324 49.7
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 5.6e-69 265.4 321 48.3
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 5.3e-67 258.8 309 47.2
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 1.1e-64 251.1 308 47.4
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 4.2e-64 249.2 308 45.5
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 3.5e-63 246.1 326 46.3
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 3.9e-62 242.7 301 44.5
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 1.9e-61 240.4 304 47.0
Aqoxy7G00278 Aquilegia oxysepala HOM05D001925 ORTHO05D004257 7.4e-61 238.4 313 46.3
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 7.4e-61 238.4 312 44.9
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.1e-59 234.6 311 44.1
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 1.8e-59 233.8 320 42.8
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 2.4e-59 233.4 318 42.8
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 3.1e-59 233.0 310 44.5
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 3.1e-59 233.0 300 44.7
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 4.0e-59 232.6 300 44.7
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 5.3e-59 232.3 305 45.9
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 6.9e-59 231.9 301 44.5
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 1.2e-58 231.1 333 43.5
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 2.6e-58 229.9 300 44.7
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 3.4e-58 229.6 308 44.5
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 9.9e-58 228.0 295 45.4
Potri.014G086000 Populus trichocarpa HOM05D001925 ORTHO05D004257 1.3e-57 227.6 312 42.9
TAR636G0324 Trochodendron aralioides HOM05D001925 ORTHO05D004257 1.3e-57 227.6 297 45.1
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 6.4e-57 225.3 302 45.0
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 6.4e-57 225.3 306 43.8
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 1.1e-56 224.6 333 43.2
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 2.4e-56 223.4 320 43.8
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 5.5e-56 222.2 298 44.6
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 9.3e-56 221.5 328 43.0
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 6.0e-55 218.8 298 45.3
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 1.3e-54 217.6 279 46.6
Sabra02G0127500 Salix brachista HOM05D001925 ORTHO05D004257 1.8e-54 217.2 312 41.3
Potri.002G160700 Populus trichocarpa HOM05D001925 ORTHO05D004257 3.9e-54 216.1 312 41.3
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 6.7e-54 215.3 327 43.7
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.1e-53 214.5 320 41.6
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 1.9e-53 213.8 288 45.1
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 3.3e-53 213.0 306 43.5
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 5.6e-53 212.2 305 42.3
PSO478G2649 Papaver somniferum HOM05D001925 ORTHO05D004257 5.6e-53 212.2 286 46.5
Eucgr.D02304 Eucalyptus grandis HOM05D001925 ORTHO05D004257 7.4e-53 211.8 303 42.9
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 9.6e-53 211.5 305 42.3
PSO782G1204 Papaver somniferum HOM05D001925 ORTHO05D004257 9.6e-53 211.5 313 44.4
Cpa.g.sc11.19 Carica papaya HOM05D001925 ORTHO05D004257 1.6e-52 210.7 318 43.1
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 2.1e-52 210.3 287 45.3
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 2.8e-52 209.9 304 41.4
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 2.8e-52 209.9 303 42.6
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 2.8e-52 209.9 321 42.4
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 3.7e-52 209.5 305 42.0
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 3.7e-52 209.5 286 41.6
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 8.2e-52 208.4 305 41.6
ClCG05G001470 Citrullus lanatus HOM05D001925 ORTHO05D004257 1.1e-51 208.0 314 40.8
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.1e-51 208.0 320 40.6
CsaV3_3G008850 Cucumis sativus L. HOM05D001925 ORTHO05D004257 1.4e-51 207.6 319 42.0
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 1.4e-51 207.6 300 44.0
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.4e-51 206.8 305 41.6
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 4.0e-51 206.1 285 41.4
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 4.0e-51 206.1 315 42.9
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 5.3e-51 205.7 286 43.0
MELO3C006104.2 Cucumis melo HOM05D001925 ORTHO05D004257 6.9e-51 205.3 305 41.3
Sed0006621 Sechium edule HOM05D001925 ORTHO05D004257 9.0e-51 204.9 315 42.2
Ah.05g180510 Amaranthus hybridus HOM05D001925 ORTHO05D004257 1.2e-50 204.5 315 42.2
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 1.2e-50 204.5 326 41.7
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 1.2e-50 204.5 296 41.6
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 1.5e-50 204.1 308 43.5
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 5.8e-50 202.2 304 42.1
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 1.3e-49 201.1 305 41.6
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 1.3e-49 201.1 328 39.6
MD01G1065100 Malus domestica HOM05D001925 ORTHO05D004257 1.7e-49 200.7 305 41.3
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.7e-49 200.7 295 42.7
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 2.2e-49 200.3 298 43.0
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 2.9e-49 199.9 305 41.6
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 4.9e-49 199.1 316 41.1
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 4.9e-49 199.1 321 39.9
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.1e-48 198.0 296 41.6
Sed0020685 Sechium edule HOM05D001925 ORTHO05D004257 1.1e-48 198.0 315 41.3
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 1.4e-48 197.6 290 42.8
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 3.2e-48 196.4 304 41.1
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 2.7e-47 193.4 328 39.9
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 3.5e-47 193.0 305 39.7
GSVIVG01026948001 Vitis vinifera HOM05D001925 ORTHO05D004257 3.0e-46 189.9 314 40.4
Aa31LG5G590 Aethionema arabicum HOM05D001925 ORTHO05D004257 3.9e-46 189.5 318 37.4
MD07G1135300 Malus domestica HOM05D001925 ORTHO05D004257 1.9e-45 187.2 302 41.1
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.9e-45 187.2 315 41.0
Nitab4.5_0008206g0010 Nicotiana tabacum HOM05D001925 ORTHO05D004257 3.3e-45 186.4 316 40.8
CiPaw.01G062900 Carya illinoinensis HOM05D001925 ORTHO05D004257 5.7e-45 185.7 308 38.6
THA.LOC104825845 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 7.4e-45 185.3 321 38.9
Sc26g0000880 Simmondsia chinensis HOM05D001925 ORTHO05D004257 9.7e-45 184.9 306 37.6
ATR0680G064 Amborella trichopoda HOM05D001925 ORTHO05D004257 8.2e-44 181.8 321 39.9
PGR042G2528 Punica granatum HOM05D001925 ORTHO05D004257 1.1e-43 181.4 309 38.2
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 3.1e-43 179.9 278 38.5
Sp6g00430 Schrenkiella parvula HOM05D001925 ORTHO05D004257 3.1e-43 179.9 309 36.9
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 4.1e-43 179.5 260 42.3
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 5.9e-42 175.6 315 39.4
Thhalv10029186m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 1.7e-41 174.1 314 36.3
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 6.5e-41 172.2 305 40.3
SalBow3G4075 Salvia bowleyana HOM05D001925 ORTHO05D004257 1.1e-40 171.4 297 38.0
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 1.1e-40 171.4 319 39.8
Hund27265 Selenicereus undatus HOM05D001925 ORTHO05D004257 5.5e-40 169.1 282 39.7
THA.LOC104817300 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 5.5e-40 169.1 300 36.3
Psat3g108000 Pisum sativum HOM05D001925 ORTHO05D004257 7.2e-40 168.7 277 39.0
CAN.G116.9 Capsicum annuum HOM05D001925 ORTHO05D004257 1.6e-39 167.5 313 37.7
Carub.0006s3688 Capsella rubella HOM05D001925 ORTHO05D004257 3.6e-39 166.4 309 36.9
unitig_749.g13536 Utricularia gibba HOM05D001925 ORTHO05D004257 3.6e-39 166.4 301 38.9
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 1.8e-38 164.1 279 35.8
AUR62022581 Chenopodium quinoa HOM05D001925 ORTHO05D004257 3.0e-38 163.3 290 37.9
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 5.1e-38 162.5 299 36.5
CARHR248450 Cardamine hirsuta HOM05D001925 ORTHO05D004257 1.9e-37 160.6 296 36.1
AL4G45210 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 3.3e-37 159.8 283 37.5
Carub.0004s2868 Capsella rubella HOM05D001925 ORTHO05D004257 5.7e-37 159.1 301 36.2
THA.LOC104817027 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 7.4e-37 158.7 277 37.5
CARHR141250 Cardamine hirsuta HOM05D001925 ORTHO05D004257 2.2e-36 157.1 288 38.2
Sp4g28050 Schrenkiella parvula HOM05D001925 ORTHO05D004257 2.2e-36 157.1 294 35.7
PGSC0003DMG400006504 Solanum tuberosum HOM05D001925 ORTHO05D004257 3.7e-36 156.4 286 39.9
Eucgr.E00120 Eucalyptus grandis HOM05D001925 ORTHO05D004257 8.2e-36 155.2 273 39.2
AT2G45980 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 1.8e-35 154.1 283 37.5
Thhalv10001583m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 1.8e-35 154.1 295 35.6
Sc23g0002810 Simmondsia chinensis HOM05D001925 ORTHO05D004257 1.8e-35 154.1 279 35.8
AL6G53090 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 2.4e-35 153.7 302 37.1
C04p06900 Brassica napus HOM05D001925 ORTHO05D004257 6.9e-35 152.1 287 36.6
BolC4t22311H Brassica oleracea HOM05D001925 ORTHO05D004257 6.9e-35 152.1 287 36.6
A05p05970 Brassica napus HOM05D001925 ORTHO05D004257 9.1e-35 151.8 283 37.1
BraA05t19560Z Brassica rapa HOM05D001925 ORTHO05D004257 9.1e-35 151.8 283 37.1
CDE08G0634 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 9.1e-35 151.8 322 32.9
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 5.9e-34 149.1 306 36.6
Aa31LG1G27390 Aethionema arabicum HOM05D001925 ORTHO05D004257 1.3e-33 147.9 302 34.8
HPP92_025783 Vanilla planifolia HOM05D001925 ORTHO05D004257 1.1e-32 144.8 300 34.0
AT4G00355 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 1.4e-32 144.4 305 37.4
ECA236G3632 Erigeron canadensis HOM05D001925 ORTHO05D004257 1.4e-32 144.4 308 34.4
THA.LOC104802035 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 1.9e-32 144.1 306 33.7
EL10Ac1g00401 Beta vulgaris HOM05D001925 ORTHO05D004257 4.2e-32 142.9 254 36.6
AUR62004372 Chenopodium quinoa HOM05D001925 ORTHO05D004257 1.6e-31 141.0 287 36.6
HPP92_014720 Vanilla planifolia HOM05D001925 ORTHO05D004257 3.6e-31 139.8 295 35.3
C04p71970 Brassica napus HOM05D001925 ORTHO05D004257 5.1e-30 136.0 286 33.9
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea HOM05D001925 ORTHO05D004257 8.8e-30 135.2 307 36.2
SGA_v2.0_scaffold55G19707 Striga asiatica HOM05D001925 ORTHO05D004257 2.0e-29 134.0 276 33.3
HanXRQChr13g0426611 Helianthus annuus HOM05D001925 ORTHO05D004257 2.6e-29 133.7 265 34.3
Lj6A572T61 Lonicera japonica HOM05D001925 ORTHO05D004257 3.3e-29 133.3 235 33.2
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 1.3e-28 131.3 201 40.3
unitig_8.g3798 Utricularia gibba HOM05D001925 ORTHO05D004257 1.3e-28 131.3 297 33.3
Migut.B01767 Erythranthe guttata HOM05D001925 ORTHO05D004257 2.6e-26 123.6 310 33.5
BcaB01g02169 Brassica carinata HOM05D001925 ORTHO05D004257 3.4e-26 123.2 310 32.9
Medtr2g027720 Medicago truncatula HOM05D001925 ORTHO05D004257 5.9e-26 122.5 256 35.9
SEGI_07880 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 5.9e-26 122.5 357 29.7
MBI17_g42624_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 3.8e-25 119.8 211 36.5
Os02g0821900 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 3.8e-25 119.8 298 30.9
Os04g0165300 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 5.0e-25 119.4 286 35.7
Lsat_1_v5_gn_7_4301 Lactuca sativa HOM05D001925 ORTHO05D004257 6.5e-25 119.0 296 29.4
A04p34180 Brassica napus HOM05D001925 ORTHO05D004257 8.5e-25 118.6 281 33.5
BraA04t18879Z Brassica rapa HOM05D001925 ORTHO05D004257 8.5e-25 118.6 281 33.5
BcaC01g06884 Brassica carinata HOM05D001925 ORTHO05D004257 1.1e-24 118.2 321 31.8
BolC3t16197H Brassica oleracea HOM05D001925 ORTHO05D004257 1.9e-24 117.5 323 31.6
CDE05G2831 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 2.5e-24 117.1 267 30.0
C03p39260 Brassica napus HOM05D001925 ORTHO05D004257 3.2e-24 116.7 324 31.5
Zm00001eb318800 Zea mays HOM05D001925 ORTHO05D004257 2.1e-23 114.0 280 30.7
A03p32220 Brassica napus HOM05D001925 ORTHO05D004257 3.6e-23 113.2 319 30.4
BraA03t12392Z Brassica rapa HOM05D001925 ORTHO05D004257 3.6e-23 113.2 319 30.4
BolC4t28695H Brassica oleracea HOM05D001925 ORTHO05D004257 1.4e-22 111.3 286 30.4
Zm00001eb103050 Zea mays HOM05D001925 ORTHO05D004257 1.1e-21 108.2 276 32.2
Zm00001eb191080 Zea mays HOM05D001925 ORTHO05D004257 1.5e-21 107.8 299 30.8
Lalb_Chr11g0072911 Lupinus albus HOM05D001925 ORTHO05D004257 1.7e-20 104.4 298 29.2
MBI17_g35262_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 5.3e-19 99.4 96 53.1
Zm00001eb305930 Zea mays HOM05D001925 ORTHO05D004257 7.0e-19 99.0 312 28.5
HanXRQChr04g0121161 Helianthus annuus HOM05D001925 ORTHO05D004257 2.0e-18 97.4 246 29.7
SGA_v2.0_scaffold4G02300 Striga asiatica HOM05D001925 ORTHO05D004257 2.2e-17 94.0 267 30.0
Mapoly0022s0094 Marchantia polymorpha HOM05D001925 ORTHO05D004257 1.0e-14 85.1 154 33.1
Zm00001eb087910 Zea mays HOM05D001925 ORTHO05D004257 1.4e-11 74.7 243 28.0
SGA_v2.0_scaffold95G28831 Striga asiatica HOM05D001925 ORTHO05D004257 3.5e-10 70.1 253 27.3
Zm00001eb415260 Zea mays HOM05D001925 ORTHO05D004257 3.5e-10 70.1 243 27.6
A05p05940 Brassica napus HOM05D001925 ORTHO05D004257 4.5e-10 69.7 77 46.8
BraA05t19557Z Brassica rapa HOM05D001925 ORTHO05D004257 4.5e-10 69.7 77 46.8
Os07g0418200 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 1.3e-09 68.2 283 26.5
SMO112G0035 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 3.8e-09 66.6 88 42.0
SMO364G0089 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 5.0e-09 66.2 88 42.0
C04p06870 Brassica napus HOM05D001925 ORTHO05D004257 3.2e-08 63.5 54 57.4
BolC4t22309H Brassica oleracea HOM05D001925 ORTHO05D004257 3.2e-08 63.5 54 57.4
Pp3c9_18340 Physcomitrium patens HOM05D001925 ORTHO05D004257 1.8e-06 57.8 77 35.1
Pp3c15_17300 Physcomitrium patens HOM05D001925 ORTHO05D004257 3.0e-06 57.0 105 33.3
SEGI_37364 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 8.8e-06 55.5 219 25.1


User provided reference genes

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