Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 3.5e-86 321.6 165 100.0
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 8.0e-83 310.5 165 96.4
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 3.0e-45 185.7 164 64.0
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 2.3e-37 159.5 166 59.0
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 5.6e-36 154.8 165 57.6
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 4.0e-34 148.7 169 56.8
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 1.2e-33 147.1 166 55.4
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 4.6e-30 135.2 165 50.3
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 4.6e-30 135.2 165 52.7
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 7.8e-30 134.4 164 53.0
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 3.9e-29 132.1 168 50.6
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.1e-28 130.6 180 48.3
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 1.9e-28 129.8 139 56.8
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 2.5e-28 129.4 165 51.5
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 2.5e-28 129.4 164 52.4
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.3e-28 128.6 165 50.9
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 7.3e-28 127.9 164 49.4
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 7.3e-28 127.9 164 49.4
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 9.6e-28 127.5 176 49.4
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 9.6e-28 127.5 88 72.7
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 1.3e-27 127.1 183 48.6
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.1e-27 126.3 165 50.3
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 4.8e-27 125.2 177 49.7
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.8e-27 125.2 164 48.2
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 4.8e-27 125.2 91 72.5
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 4.8e-27 125.2 166 49.4
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 6.2e-27 124.8 91 74.7
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.1e-27 124.4 165 50.3
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 8.1e-27 124.4 89 74.2
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 3.1e-26 122.5 164 53.0
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 4.0e-26 122.1 168 47.6
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 6.9e-26 121.3 173 49.1
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 6.9e-26 121.3 170 50.0
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 9.0e-26 120.9 178 47.2
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 9.0e-26 120.9 91 72.5
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 1.5e-25 120.2 171 48.5
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 2.0e-25 119.8 167 51.5
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 2.0e-25 119.8 173 46.8
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 3.4e-25 119.0 164 46.3
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 3.4e-25 119.0 179 44.7
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 4.5e-25 118.6 176 45.5
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 4.5e-25 118.6 175 46.9
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 7.6e-25 117.9 170 48.8
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 9.9e-25 117.5 169 47.9
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.3e-24 117.1 178 46.6
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.3e-24 117.1 178 46.6
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 1.3e-24 117.1 91 70.3
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.3e-24 117.1 172 47.7
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.7e-24 116.7 174 46.0
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.2e-24 116.3 172 46.5
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 2.2e-24 116.3 91 70.3
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 4.9e-24 115.2 169 47.9
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 4.9e-24 115.2 120 57.5
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 6.4e-24 114.8 176 47.2
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 6.4e-24 114.8 98 65.3
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 1.1e-23 114.0 164 48.8
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 3.2e-23 112.5 92 65.2
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 1.2e-22 110.5 89 68.5
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 6.0e-22 108.2 170 45.9
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 6.0e-22 108.2 178 43.3
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 1.0e-21 107.5 173 44.5
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 1.3e-21 107.1 170 44.1
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 2.3e-21 106.3 168 43.5
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 2.3e-21 106.3 168 43.5
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 3.0e-21 105.9 92 64.1
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 5.1e-21 105.1 153 45.1
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 5.1e-21 105.1 188 42.0
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 6.7e-21 104.8 170 44.7
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 6.7e-21 104.8 174 43.7
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 8.7e-21 104.4 97 60.8
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 8.7e-21 104.4 81 66.7
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 8.7e-21 104.4 81 66.7
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 8.7e-21 104.4 92 63.0
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 1.1e-20 104.0 168 42.3
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 1.9e-20 103.2 166 44.6
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 1.9e-20 103.2 171 44.4
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 1.9e-20 103.2 171 41.5
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 1.9e-20 103.2 164 43.9
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 1.9e-20 103.2 92 62.0
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 2.5e-20 102.8 162 43.8
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 5.6e-20 101.7 163 43.6
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 5.6e-20 101.7 163 43.6
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 1.3e-19 100.5 100 59.0
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 1.6e-19 100.1 100 59.0
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 1.6e-19 100.1 100 59.0
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 2.1e-19 99.8 175 45.7
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 6.2e-19 98.2 138 47.8
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 9.0e-18 94.4 138 47.8
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 2.0e-17 93.2 172 40.1
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.0e-17 93.2 168 41.7
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 3.4e-17 92.4 145 44.1
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 9.9e-17 90.9 167 43.7
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 1.7e-16 90.1 179 40.2
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 3.8e-16 89.0 140 47.9
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 3.8e-16 89.0 183 39.9
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 4.9e-16 88.6 137 46.7
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 8.4e-16 87.8 61 73.8
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 1.1e-15 87.4 146 42.5
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 1.4e-15 87.0 143 43.4
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 1.4e-15 87.0 90 53.3
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 2.4e-15 86.3 78 64.1
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 1.2e-14 84.0 164 43.3
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 4.6e-14 82.0 55 72.7
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 4.6e-14 82.0 61 72.1
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 2.3e-13 79.7 69 58.0
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 8.7e-13 77.8 150 42.0
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 2.5e-12 76.3 164 40.9
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 3.3e-12 75.9 141 42.6
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 1.6e-11 73.6 67 53.7
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 6.9e-10 68.2 67 55.2
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 9.0e-10 67.8 44 70.5
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 1.5e-09 67.0 141 37.6
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 1.3e-08 63.9 127 39.4
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 1.4e-07 60.5 75 45.3
MCO01G451 Micromonas commoda HOM05D006875 ORTHO05D008416 1.9e-07 60.1 68 47.1
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 2.5e-07 59.7 152 36.2


User provided reference genes

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