Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 2.8e-154 548.5 267 100.0
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 7.0e-137 490.7 241 98.3
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.6e-136 489.6 241 98.8
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 5.2e-100 368.2 220 76.8
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.4e-98 361.3 239 71.5
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 2.4e-97 359.4 221 72.9
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 3.2e-97 359.0 218 76.6
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 7.1e-97 357.8 238 69.7
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 1.6e-96 356.7 226 72.1
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 2.7e-96 355.9 215 76.7
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 3.5e-96 355.5 218 74.8
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 6.0e-96 354.8 221 74.7
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 1.7e-95 353.2 224 69.6
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 2.3e-95 352.8 235 71.1
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 1.1e-94 350.5 226 69.9
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.5e-94 350.1 218 72.9
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.9e-94 349.7 236 68.2
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 2.5e-94 349.4 237 68.4
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 5.6e-94 348.2 238 69.3
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 1.2e-93 347.1 226 69.9
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 2.1e-93 346.3 225 69.3
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.1e-93 346.3 231 72.7
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 2.8e-93 345.9 224 70.5
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 2.8e-93 345.9 249 66.7
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 2.8e-93 345.9 242 65.7
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 3.6e-93 345.5 231 70.6
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 4.7e-93 345.1 225 71.6
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 6.2e-93 344.7 245 65.3
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 6.2e-93 344.7 225 68.0
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 8.1e-93 344.4 239 67.8
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.1e-92 344.0 225 69.8
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.1e-92 344.0 215 74.0
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 1.1e-92 344.0 245 65.3
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.4e-92 343.6 238 68.1
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.8e-92 343.2 224 67.9
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 4.0e-92 342.0 225 68.9
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 4.0e-92 342.0 235 66.4
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 6.8e-92 341.3 202 76.2
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 8.9e-92 340.9 244 65.2
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 8.9e-92 340.9 234 66.7
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.2e-91 340.5 215 73.0
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.5e-91 340.1 210 73.8
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.0e-91 339.7 202 75.7
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 3.4e-91 339.0 215 71.2
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 3.4e-91 339.0 241 67.6
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.4e-91 338.6 202 75.7
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 4.4e-91 338.6 214 72.4
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 5.8e-91 338.2 238 67.2
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 1.3e-90 337.0 214 72.0
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 2.9e-90 335.9 237 67.5
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 2.9e-90 335.9 215 72.1
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 3.7e-90 335.5 237 67.5
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 3.7e-90 335.5 222 68.9
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 4.9e-90 335.1 243 66.7
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 4.9e-90 335.1 241 66.0
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 4.9e-90 335.1 202 75.2
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 6.4e-90 334.7 216 68.5
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 6.4e-90 334.7 214 68.7
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.4e-89 333.6 243 65.0
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 1.4e-89 333.6 241 66.4
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.9e-89 333.2 202 75.2
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.9e-89 333.2 224 68.3
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 1.9e-89 333.2 241 66.0
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 2.4e-89 332.8 204 74.0
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 4.1e-89 332.0 206 74.3
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.2e-88 330.5 210 70.5
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 1.6e-88 330.1 252 64.7
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 2.1e-88 329.7 217 68.7
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 3.5e-88 328.9 231 66.7
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 4.6e-88 328.6 225 66.7
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 1.0e-87 327.4 216 72.2
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 8.6e-87 324.3 231 66.2
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 7.3e-86 321.2 220 66.4
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.2e-85 320.5 210 66.2
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 3.6e-85 318.9 210 65.7
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 1.4e-84 317.0 245 61.6
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 2.4e-81 306.2 239 59.4
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 1.1e-76 290.8 231 59.7
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 2.4e-76 289.7 223 59.6
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 3.1e-76 289.3 204 63.7
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.5e-75 287.0 206 68.0
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.5e-75 287.0 206 68.0
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.6e-75 286.2 202 66.3
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.8e-75 285.0 206 67.5
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 3.8e-74 282.3 220 63.2
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 3.5e-72 275.8 211 59.7
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 1.0e-71 274.2 159 78.6
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 6.9e-68 261.5 243 57.2
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 3.8e-66 255.8 220 57.7
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 4.2e-65 252.3 237 55.3
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 2.1e-56 223.4 202 57.4
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 2.7e-56 223.0 144 73.6
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 1.8e-52 210.3 144 67.4
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.4e-52 209.9 130 78.5
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.4e-52 209.9 130 78.5
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 1.1e-46 191.0 123 74.8
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 1.6e-45 187.2 123 70.7
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.8e-45 186.4 126 70.6
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 5.3e-44 182.2 126 69.0
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 2.5e-38 163.3 217 39.2
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.7e-37 160.6 161 50.3
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 2.0e-30 137.1 192 37.0
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 7.5e-22 108.6 63 76.2
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 1.4e-15 87.8 212 28.3
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 1.4e-15 87.8 204 29.4
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 2.3e-15 87.0 216 30.6
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 3.5e-11 73.2 75 45.3
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 9.4e-09 65.1 236 23.3
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 4.0e-07 59.7 77 39.0


User provided reference genes

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