Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 5.0e-79 297.7 154 100.0
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 1.2e-75 286.6 154 96.8
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 6.6e-31 137.9 147 50.3
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 1.2e-27 127.1 151 47.7
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 3.4e-27 125.6 145 53.8
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 3.4e-27 125.6 143 48.3
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 3.4e-27 125.6 152 49.3
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 5.8e-27 124.8 146 50.0
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 5.8e-27 124.8 151 51.0
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 7.6e-27 124.4 151 48.3
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 1.3e-26 123.6 151 49.0
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 1.4e-25 120.2 136 49.3
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 4.2e-25 118.6 146 47.9
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 5.4e-25 118.2 150 49.3
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 5.4e-25 118.2 150 49.3
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 7.1e-25 117.9 144 51.4
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 9.3e-25 117.5 150 49.3
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 2.1e-24 116.3 149 49.0
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 3.5e-24 115.5 150 48.7
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 3.5e-24 115.5 150 48.0
Aqoxy1G01237 Aquilegia oxysepala HOM05D005728 ORTHO05D005733 6.0e-24 114.8 150 49.3
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 6.0e-24 114.8 143 50.3
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 6.0e-24 114.8 153 44.4
Potri.009G013800 Populus trichocarpa HOM05D005728 ORTHO05D005733 6.0e-24 114.8 149 47.0
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.0e-23 114.0 145 50.3
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 1.7e-23 113.2 157 45.9
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 6.6e-23 111.3 131 48.1
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 6.6e-23 111.3 146 46.6
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 1.1e-22 110.5 149 47.0
Prupe.6G101500 Prunus persica HOM05D005728 ORTHO05D005733 1.1e-22 110.5 150 44.0
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 1.9e-22 109.8 151 45.0
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 3.3e-22 109.0 147 46.3
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 4.3e-22 108.6 146 40.4
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 4.3e-22 108.6 149 44.3
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 4.3e-22 108.6 149 43.6
Potri.004G211000 Populus trichocarpa HOM05D005728 ORTHO05D005733 5.6e-22 108.2 151 46.4
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.6e-21 106.7 148 45.3
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 2.8e-21 105.9 144 43.8
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 4.8e-21 105.1 153 42.5
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 1.4e-20 103.6 148 44.6
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 1.8e-20 103.2 157 42.0
ECA248G1213 Erigeron canadensis HOM05D005728 ORTHO05D005733 2.4e-20 102.8 147 38.8
MBI07_g19310_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 3.1e-20 102.4 154 44.2
Manes.04G021300 Manihot esculenta HOM05D005728 ORTHO05D005733 3.1e-20 102.4 147 42.9
MD11G1136100 Malus domestica HOM05D005728 ORTHO05D005733 4.0e-20 102.1 143 42.7
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 5.3e-20 101.7 139 45.3
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 6.9e-20 101.3 146 43.2
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 6.9e-20 101.3 149 45.0
Glyma.11G146600 Glycine max HOM05D005728 ORTHO05D005733 9.0e-20 100.9 144 42.4
Ca_01413_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 1.2e-19 100.5 153 45.1
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.2e-19 100.5 148 43.9
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 1.2e-19 100.5 146 39.7
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 1.5e-19 100.1 153 42.5
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 1.5e-19 100.1 146 39.7
Sabra04G0142500 Salix brachista HOM05D005728 ORTHO05D005733 2.6e-19 99.4 145 43.4
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 2.6e-19 99.4 144 42.4
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 4.4e-19 98.6 148 43.2
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 4.4e-19 98.6 144 45.1
TPR.G11537 Trifolium pratense HOM05D005728 ORTHO05D005733 4.4e-19 98.6 139 46.0
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 5.8e-19 98.2 135 45.9
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 7.6e-19 97.8 139 41.0
Medtr2g094210 Medicago truncatula HOM05D005728 ORTHO05D005733 1.3e-18 97.1 147 43.5
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 2.2e-18 96.3 146 39.0
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 2.2e-18 96.3 146 41.1
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 3.8e-18 95.5 146 43.2
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 1.1e-17 94.0 148 38.5
Psat7g225080 Pisum sativum HOM05D005728 ORTHO05D005733 1.1e-17 94.0 149 38.9
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 1.4e-17 93.6 144 40.3
Ca_19255_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 5.4e-17 91.7 141 42.6
Gohir.A03G033900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 9.3e-17 90.9 146 42.5
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.2e-16 90.5 149 38.9
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 1.6e-16 90.1 146 41.8
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 1.6e-16 90.1 149 37.6
AUR62039639 Chenopodium quinoa HOM05D005728 ORTHO05D005733 2.7e-16 89.4 146 36.3
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 4.6e-16 88.6 141 42.6
Lj3g0009869 Lotus japonicus HOM05D005728 ORTHO05D005733 6.0e-16 88.2 138 41.3
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 7.9e-16 87.8 146 38.4
Ah.01g002910 Amaranthus hybridus HOM05D005728 ORTHO05D005733 1.3e-15 87.0 143 39.9
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 1.3e-15 87.0 144 40.3
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 1.7e-15 86.7 130 43.8
AUR62024979 Chenopodium quinoa HOM05D005728 ORTHO05D005733 3.9e-15 85.5 145 33.8
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 1.1e-14 84.0 147 41.5
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 1.1e-14 84.0 131 40.5
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 1.9e-14 83.2 131 42.7
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 2.5e-14 82.8 132 43.2
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 3.3e-14 82.4 131 41.2
Lalb_Chr14g0374671 Lupinus albus HOM05D005728 ORTHO05D005733 4.3e-14 82.0 148 41.9
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 5.6e-14 81.6 108 47.2
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 1.6e-13 80.1 145 38.6
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 2.8e-13 79.3 106 47.2
MBI10_g13404_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 1.4e-12 77.0 154 39.6
BcaB06g28212 Brassica carinata HOM05D005728 ORTHO05D005733 4.0e-12 75.5 121 43.8
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 5.3e-12 75.1 129 43.4
C04p22970 Brassica napus HOM05D005728 ORTHO05D005733 9.0e-12 74.3 121 43.8
Lj3g0014252 Lotus japonicus HOM05D005728 ORTHO05D005733 1.5e-11 73.6 123 40.7
Thhalv10017443m.g Eutrema salsugineum HOM05D005728 ORTHO05D005733 2.0e-11 73.2 121 43.0
Ah.01g014340 Amaranthus hybridus HOM05D005728 ORTHO05D005733 2.6e-11 72.8 144 35.4
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 3.4e-11 72.4 121 39.7
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 4.5e-11 72.0 140 35.0
BolC4t23791H Brassica oleracea HOM05D005728 ORTHO05D005733 7.6e-11 71.2 121 42.1
Manes.11G145200 Manihot esculenta HOM05D005728 ORTHO05D005733 9.9e-11 70.9 126 45.2
A07p18980 Brassica napus HOM05D005728 ORTHO05D005733 1.3e-10 70.5 122 41.8
BraA07t29603Z Brassica rapa HOM05D005728 ORTHO05D005733 1.3e-10 70.5 122 41.8
Carub.0004s0935 Capsella rubella HOM05D005728 ORTHO05D005733 1.3e-10 70.5 122 42.6
ATR0048G010 Amborella trichopoda HOM05D005728 ORTHO05D005733 1.7e-10 70.1 146 35.6
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 1.7e-10 70.1 125 39.2
A04p21550 Brassica napus HOM05D005728 ORTHO05D005733 2.2e-10 69.7 121 42.1
BraA04t17719Z Brassica rapa HOM05D005728 ORTHO05D005733 2.2e-10 69.7 121 42.1
arahy.Tifrunner.gnm1.ann1.5L1A31 Arachis hypogaea HOM05D005728 ORTHO05D005733 2.9e-10 69.3 145 34.5
Nitab4.5_0000106g0140 Nicotiana tabacum HOM05D005728 ORTHO05D005733 3.8e-10 68.9 146 36.3
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 4.9e-10 68.6 145 37.2
AT2G28410 Arabidopsis thaliana HOM05D005728 ORTHO05D005733 6.4e-10 68.2 121 39.7
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 6.4e-10 68.2 135 33.3
Sabra09G0007800 Salix brachista HOM05D005728 ORTHO05D005733 8.4e-10 67.8 136 36.8
BolC4t27283H Brassica oleracea HOM05D005728 ORTHO05D005733 1.4e-09 67.0 121 41.3
AL4G21610 Arabidopsis lyrata HOM05D005728 ORTHO05D005733 1.9e-09 66.6 121 39.7
BcaC02g08173 Brassica carinata HOM05D005728 ORTHO05D005733 1.9e-09 66.6 121 41.3
C04p57650 Brassica napus HOM05D005728 ORTHO05D005733 1.9e-09 66.6 121 41.3
Sp4g11230 Schrenkiella parvula HOM05D005728 ORTHO05D005733 3.2e-09 65.9 116 40.5
CARHR121360 Cardamine hirsuta HOM05D005728 ORTHO05D005733 4.2e-09 65.5 122 41.8
Aa31LG5G7800 Aethionema arabicum HOM05D005728 ORTHO05D005733 5.5e-09 65.1 121 40.5
Gorai.003G141500 Gossypium raimondii HOM05D005728 ORTHO05D005733 2.1e-08 63.2 118 39.8
A03p11060 Brassica napus HOM05D010860 ORTHO05D005733 6.0e-08 61.6 147 35.4
BraA03t10420Z Brassica rapa HOM05D010860 ORTHO05D005733 6.0e-08 61.6 147 35.4
BraA10t43864Z Brassica rapa HOM05D010860 ORTHO05D005733 3.9e-07 58.9 149 30.2
SalBow3G4069 Salvia bowleyana HOM05D005728 ORTHO05D005733 5.1e-07 58.5 137 33.6
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 8.7e-07 57.8 117 35.0
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.9e-06 56.6 127 37.0
AT5G60650 Arabidopsis thaliana HOM05D010860 ORTHO05D005733 2.5e-06 56.2 150 29.3
BcaB08g36363 Brassica carinata HOM05D010860 ORTHO05D005733 4.3e-06 55.5 151 33.8
unitig_21.g20302 Utricularia gibba HOM05D005728 ORTHO05D005733 4.3e-06 55.5 136 33.8


User provided reference genes

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