Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.5e-192 676.0 346 100.0
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 1.5e-179 632.9 346 93.6
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 1.2e-144 516.9 347 78.1
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 3.3e-139 498.8 329 78.1
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 5.3e-137 491.5 346 74.3
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 4.5e-136 488.4 345 74.2
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 1.9e-134 483.0 326 76.7
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 2.7e-133 479.2 326 76.1
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 3.9e-132 475.3 346 72.0
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 8.8e-132 474.2 344 70.9
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 3.3e-131 472.2 335 74.3
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 4.3e-131 471.9 336 74.1
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 5.7e-131 471.5 335 74.3
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 1.3e-130 470.3 326 75.2
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 1.1e-129 467.2 332 73.2
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.4e-129 466.8 338 72.8
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 1.4e-129 466.8 335 73.1
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 1.8e-129 466.5 332 74.1
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 1.2e-128 463.8 338 72.2
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 1.5e-128 463.4 332 73.5
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.7e-127 459.9 329 71.1
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 2.2e-127 459.5 347 69.2
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 3.8e-127 458.8 342 68.7
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.1e-126 457.2 349 69.1
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.2e-126 455.7 349 69.1
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.2e-126 455.3 347 69.5
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 5.5e-126 454.9 341 68.6
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 9.4e-126 454.1 329 70.8
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 1.2e-125 453.8 327 71.3
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 1.6e-125 453.4 338 69.2
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 2.1e-125 453.0 329 71.7
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 2.1e-125 453.0 349 69.3
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 2.1e-125 453.0 341 69.5
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 2.7e-125 452.6 327 71.6
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 4.7e-125 451.8 329 70.8
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 4.7e-125 451.8 340 70.0
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 7.9e-125 451.1 343 68.5
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 1.4e-124 450.3 341 68.9
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 1.8e-124 449.9 344 70.1
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 3.0e-124 449.1 327 71.6
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 5.1e-124 448.4 341 70.4
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 5.1e-124 448.4 326 72.4
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 8.8e-124 447.6 328 72.0
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 8.8e-124 447.6 349 68.5
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.1e-123 447.2 349 68.2
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 2.0e-123 446.4 330 69.4
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 2.0e-123 446.4 326 72.1
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 2.6e-123 446.0 341 69.2
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 5.7e-123 444.9 339 68.4
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 9.7e-123 444.1 336 68.2
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 1.3e-122 443.7 339 67.6
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 1.3e-122 443.7 336 68.2
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 1.3e-122 443.7 341 68.0
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 1.7e-122 443.4 351 66.4
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 2.2e-122 443.0 337 70.0
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 2.8e-122 442.6 336 68.2
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 2.8e-122 442.6 327 69.4
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 2.8e-122 442.6 343 68.2
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 2.8e-122 442.6 337 68.8
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 3.7e-122 442.2 325 70.2
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 8.2e-122 441.0 328 70.1
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.4e-121 440.3 336 67.9
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 3.1e-121 439.1 329 69.0
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 5.3e-121 438.3 336 68.2
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 9.1e-121 437.6 326 70.9
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 4.5e-120 435.3 318 70.8
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 1.0e-119 434.1 337 67.7
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 2.9e-119 432.6 345 66.4
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 1.4e-118 430.3 337 68.2
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 1.2e-117 427.2 317 71.6
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.6e-117 426.8 324 68.8
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 1.6e-117 426.8 339 68.1
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 2.7e-117 426.0 337 68.2
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 7.4e-115 417.9 332 68.4
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 8.2e-114 414.5 333 67.9
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 1.8e-113 413.3 326 68.4
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.5e-112 409.1 326 67.2
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 2.2e-111 406.4 331 67.4
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 3.2e-110 402.5 327 65.7
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 9.4e-110 401.0 334 64.4
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.2e-108 395.2 281 71.9
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 8.8e-108 394.4 329 66.0
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 2.6e-107 392.9 286 72.0
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 3.4e-99 365.9 279 70.6
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 3.4e-99 365.9 329 61.1
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 8.3e-98 361.3 391 54.5
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 2.7e-96 356.3 341 58.1
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 1.7e-95 353.6 379 54.1
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 2.3e-95 353.2 325 60.6
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 8.6e-95 351.3 358 57.8
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 2.3e-92 343.2 358 55.0
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 6.1e-85 318.5 207 78.3
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.0e-84 317.8 334 53.3
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 3.4e-83 312.8 338 52.7
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 9.5e-78 294.7 235 66.4
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 5.2e-76 288.9 326 50.0
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 3.4e-67 259.6 268 52.2
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.9e-57 227.3 277 49.1
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 6.9e-52 208.8 309 39.2
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 9.0e-52 208.4 364 39.0
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 5.8e-51 205.7 195 63.1
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 3.1e-44 183.3 164 58.5
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 4.5e-43 179.5 193 51.3
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 3.0e-39 166.8 111 67.6
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.3e-38 162.9 104 77.9
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 3.1e-36 156.8 108 72.2
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 1.2e-19 101.7 238 33.2
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.1e-09 68.6 87 50.6
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 2.5e-09 67.4 50 62.0
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 3.6e-08 63.5 91 45.1
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 8.8e-07 58.9 51 56.9


User provided reference genes

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