Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 2.1e-188 662.1 320 100.0
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 6.3e-185 650.6 320 98.4
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.2e-156 556.6 310 86.8
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 6.0e-151 537.7 315 82.9
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.0e-150 537.0 310 82.3
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 6.6e-150 534.3 318 80.5
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 8.6e-150 533.9 318 80.5
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 3.3e-149 531.9 318 80.5
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 7.3e-149 530.8 328 78.4
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 1.6e-148 529.6 320 79.4
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 2.1e-148 529.3 314 79.6
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 2.8e-148 528.9 314 79.9
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 2.8e-148 528.9 318 80.2
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 3.6e-148 528.5 310 81.0
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 4.7e-148 528.1 319 79.3
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 4.7e-148 528.1 310 81.0
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 1.1e-147 526.9 329 77.2
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.1e-147 526.9 310 81.0
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 2.3e-147 525.8 323 77.7
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 4.0e-147 525.0 320 78.8
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 4.0e-147 525.0 310 80.6
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 6.8e-147 524.2 320 78.4
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.2e-146 523.5 320 78.4
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.2e-146 523.5 320 78.4
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 2.0e-146 522.7 317 79.8
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 2.0e-146 522.7 318 78.3
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 4.4e-146 521.5 321 78.2
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 4.4e-146 521.5 321 78.2
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 4.4e-146 521.5 314 78.3
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 5.8e-146 521.2 314 78.3
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 5.8e-146 521.2 314 78.3
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 1.7e-145 519.6 314 78.3
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 4.9e-145 518.1 323 78.6
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.4e-145 517.7 314 77.7
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.4e-144 516.5 314 77.7
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 5.4e-144 514.6 313 78.6
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 9.2e-144 513.8 314 78.7
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 2.1e-143 512.7 320 76.9
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 2.1e-143 512.7 324 78.1
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 2.1e-143 512.7 324 78.1
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 2.7e-143 512.3 328 75.9
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 3.5e-143 511.9 314 79.3
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 2.3e-142 509.2 328 75.3
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 3.0e-142 508.8 323 76.5
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 3.0e-142 508.8 333 76.0
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 3.0e-142 508.8 320 75.6
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 8.6e-142 507.3 310 79.0
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 1.5e-141 506.5 315 77.1
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 3.3e-141 505.4 313 77.0
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 4.3e-141 505.0 326 74.8
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 5.6e-141 504.6 334 75.7
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 7.3e-141 504.2 312 76.6
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 9.5e-141 503.8 326 77.0
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.2e-140 503.4 312 76.6
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 2.1e-140 502.7 286 82.2
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 1.4e-139 500.0 318 74.8
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 8.9e-139 497.3 313 76.4
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 2.6e-138 495.7 326 74.2
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 7.6e-138 494.2 314 76.4
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.7e-137 493.0 307 74.9
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 3.2e-136 488.8 325 74.8
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 9.2e-136 487.3 286 82.5
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 3.5e-135 485.3 315 76.2
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 4.6e-135 485.0 314 75.5
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 1.2e-132 476.9 273 82.8
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 8.1e-132 474.2 278 80.6
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 4.4e-130 468.4 309 73.5
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 7.6e-130 467.6 426 59.4
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 1.1e-128 463.8 320 73.1
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 2.4e-128 462.6 389 62.2
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 1.3e-124 450.3 261 82.8
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.6e-124 449.9 322 71.4
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.1e-123 447.2 271 80.4
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.1e-123 447.2 277 76.9
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.1e-123 447.2 315 72.4
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.1e-120 437.2 327 67.9
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 1.3e-118 430.3 274 75.9
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.8e-118 429.9 264 78.4
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 3.9e-118 428.7 311 67.2
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.5e-117 426.8 250 81.6
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 7.4e-117 424.5 279 75.6
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 2.1e-116 422.9 284 73.2
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 6.2e-116 421.4 340 65.0
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.1e-115 419.1 254 76.4
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 5.3e-115 418.3 310 65.2
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 2.2e-113 412.9 310 63.9
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 2.9e-113 412.5 256 77.0
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 8.4e-113 411.0 296 72.3
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 3.0e-110 402.5 320 64.4
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 9.6e-109 397.5 244 79.1
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 3.1e-107 392.5 313 64.5
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 7.1e-104 381.3 312 63.8
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 7.9e-103 377.9 309 58.6
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.6e-100 370.2 287 61.3
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 8.2e-100 367.9 261 66.3
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 1.7e-97 360.1 278 67.3
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 1.1e-93 347.4 639 37.2
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 6.9e-91 338.2 264 65.5
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.4e-90 335.9 208 77.4
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.5e-85 320.5 314 54.5
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 1.0e-81 307.8 240 66.7
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 1.0e-78 297.7 321 53.3
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 5.3e-75 285.4 188 68.1
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 9.1e-75 284.6 188 73.9
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 5.9e-74 282.0 216 61.6
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 8.8e-70 268.1 163 78.5
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 1.0e-65 254.6 188 69.1
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.3e-65 254.2 320 48.8
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 1.5e-61 240.7 164 70.7
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 4.4e-61 239.2 157 71.3
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 1.8e-59 233.8 239 54.0
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.4e-54 217.6 175 60.0
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.8e-54 217.2 145 71.7
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 5.7e-45 185.7 128 71.9
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 1.5e-40 171.0 100 78.0
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 1.1e-38 164.9 89 87.6
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 2.5e-32 143.7 92 72.8
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 3.6e-31 139.8 276 34.8
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 2.9e-28 130.2 317 29.3
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 4.9e-28 129.4 80 77.5
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 7.1e-19 99.0 362 25.4
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 9.9e-13 78.6 46 78.3
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 7.1e-11 72.4 51 72.5
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 7.1e-11 72.4 59 59.3
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 6.2e-07 59.3 50 58.0
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 1.8e-06 57.8 65 50.8


User provided reference genes

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