Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.0e-249 866.3 446 100.0
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.2e-242 842.8 448 97.1
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.1e-155 553.9 444 66.2
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.2e-152 543.9 407 69.5
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 7.5e-152 541.2 446 63.2
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.3e-151 540.4 420 66.9
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.7e-151 540.0 415 67.7
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.9e-151 539.3 444 64.0
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 3.7e-151 538.9 427 65.6
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.2e-146 523.9 446 61.7
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 1.6e-146 523.5 424 63.0
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 5.2e-145 518.5 444 61.3
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 1.1e-142 510.8 377 69.0
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 3.2e-142 509.2 377 65.5
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 9.2e-142 507.7 440 61.4
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 1.6e-141 506.9 447 59.7
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 1.2e-138 497.3 405 62.2
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 2.1e-138 496.5 436 60.3
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 2.3e-137 493.0 447 60.6
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 5.8e-136 488.4 408 61.8
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 7.5e-136 488.0 437 59.5
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.3e-135 487.3 447 57.7
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.7e-135 485.7 447 59.1
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 6.4e-135 485.0 445 59.3
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 8.3e-135 484.6 408 61.8
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 1.1e-134 484.2 424 61.8
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 1.4e-134 483.8 439 60.4
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.9e-134 483.4 380 62.6
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.4e-134 481.9 447 58.4
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 7.1e-134 481.5 385 64.4
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 2.1e-133 479.9 379 64.6
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 2.7e-133 479.6 439 58.1
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.7e-133 479.6 447 58.2
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 6.0e-133 478.4 447 58.6
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 7.8e-133 478.0 407 59.2
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 1.7e-132 476.9 438 57.1
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 3.9e-132 475.7 437 57.9
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.5e-131 473.8 376 63.6
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 2.5e-131 473.0 409 60.6
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 2.1e-130 469.9 379 63.3
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 4.7e-130 468.8 432 57.9
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.1e-129 466.1 408 59.6
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 2.6e-128 463.0 438 56.6
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.4e-128 462.6 378 62.2
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 3.4e-128 462.6 376 62.2
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 5.8e-128 461.8 405 57.5
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 5.8e-128 461.8 436 56.4
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 5.8e-128 461.8 414 59.9
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 7.6e-128 461.5 381 61.7
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 8.4e-127 458.0 434 56.7
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 2.1e-125 453.4 376 60.1
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 6.0e-125 451.8 408 55.6
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 2.3e-124 449.9 377 58.6
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 6.6e-124 448.4 379 58.8
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 1.9e-123 446.8 378 61.6
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 5.6e-123 445.3 417 57.1
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.3e-122 444.1 381 57.5
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 3.6e-122 442.6 377 58.1
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 2.0e-120 436.8 349 61.9
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 4.2e-118 429.1 376 57.4
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 3.0e-116 422.9 435 51.7
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 1.9e-115 420.2 449 50.3
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 2.1e-114 416.8 387 55.3
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 3.6e-114 416.0 387 55.6
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 3.1e-113 412.9 383 55.4
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 3.1e-113 412.9 383 55.4
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 5.3e-113 412.1 377 57.6
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 1.5e-112 410.6 378 55.6
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 3.4e-112 409.5 435 51.0
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 3.4e-112 409.5 433 50.1
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 7.6e-112 408.3 407 53.1
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 4.9e-111 405.6 379 54.6
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 2.4e-110 403.3 432 50.0
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 3.5e-109 399.4 378 54.5
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 4.0e-105 386.0 350 57.4
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 1.7e-103 380.6 341 58.7
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 7.1e-102 375.2 302 61.9
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.0e-100 371.3 377 51.2
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.8e-100 370.5 377 51.2
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 3.8e-95 352.8 341 54.5
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 9.3e-94 348.2 391 48.1
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.4e-89 334.3 377 46.7
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 4.6e-85 319.3 329 52.9
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 7.9e-85 318.5 332 53.0
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.0e-84 318.2 262 61.5
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 5.7e-83 312.4 375 42.9
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 7.4e-83 312.0 357 47.6
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.1e-81 308.1 413 42.4
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 8.2e-74 282.0 306 48.0
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 6.8e-60 235.7 302 44.4
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.0e-59 234.2 251 50.6
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 7.0e-57 225.7 398 35.9
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 2.7e-56 223.8 387 37.0
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 2.8e-50 203.8 595 27.6
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 9.5e-46 188.7 234 44.9
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 4.6e-40 169.9 251 40.6
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 3.9e-39 166.8 116 69.0
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 8.9e-36 155.6 129 58.9
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 5.4e-33 146.4 132 52.3
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 2.2e-26 124.4 133 52.6
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 1.3e-23 115.2 80 70.0
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 2.3e-23 114.4 78 70.5
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 3.3e-22 110.5 99 60.6
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 1.4e-20 105.1 391 25.8
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.2e-16 92.0 81 55.6
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 1.7e-15 88.2 78 55.1
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 6.6e-15 86.3 87 49.4
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 8.6e-15 85.9 78 52.6
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.1e-14 85.5 61 68.9
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 3.6e-13 80.5 65 63.1
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 3.2e-09 67.4 66 56.1
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 1.6e-08 65.1 37 81.1


User provided reference genes

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