Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 7.5e-155 550.4 270 100.0
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 4.1e-145 518.1 258 98.1
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 5.8e-99 364.8 251 70.9
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 7.6e-99 364.4 210 81.4
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 6.0e-96 354.8 260 71.2
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 1.9e-94 349.7 254 68.9
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.5e-94 349.4 221 76.9
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 3.3e-94 349.0 247 69.6
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 3.3e-94 349.0 199 80.9
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 3.3e-94 349.0 229 73.8
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 7.4e-94 347.8 254 67.3
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 9.6e-94 347.4 248 69.4
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 9.6e-94 347.4 254 67.3
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 1.3e-93 347.1 253 68.4
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.3e-93 347.1 258 69.0
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.3e-93 347.1 195 82.6
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 2.8e-93 345.9 253 68.0
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 3.7e-93 345.5 247 69.6
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 6.2e-93 344.7 253 68.8
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 6.2e-93 344.7 205 79.0
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 8.2e-93 344.4 195 82.1
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 1.1e-92 344.0 239 69.9
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 1.4e-92 343.6 275 63.3
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.4e-92 343.6 195 82.1
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 1.4e-92 343.6 255 67.8
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 1.8e-92 343.2 257 68.9
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 2.4e-92 342.8 254 67.7
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 2.4e-92 342.8 220 75.0
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 2.4e-92 342.8 198 79.8
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 2.4e-92 342.8 254 66.9
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 6.9e-92 341.3 239 69.9
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 6.9e-92 341.3 195 81.5
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 6.9e-92 341.3 256 67.6
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 9.0e-92 340.9 233 71.7
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 1.2e-91 340.5 225 72.4
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 1.2e-91 340.5 208 77.4
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 1.2e-91 340.5 253 68.4
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 2.0e-91 339.7 238 70.2
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 2.0e-91 339.7 195 81.0
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 2.0e-91 339.7 209 76.6
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 2.6e-91 339.3 257 66.9
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 3.4e-91 339.0 195 81.0
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 4.5e-91 338.6 240 70.0
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 5.8e-91 338.2 218 74.3
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 7.6e-91 337.8 256 65.6
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 1.3e-90 337.0 209 75.6
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 1.3e-90 337.0 209 76.6
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 1.7e-90 336.7 195 80.0
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 1.7e-90 336.7 211 74.9
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 1.7e-90 336.7 254 66.9
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 2.2e-90 336.3 255 65.1
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 3.8e-90 335.5 257 66.1
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 6.5e-90 334.7 206 74.8
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 1.1e-89 334.0 226 70.8
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 3.2e-89 332.4 199 78.9
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 5.5e-89 331.6 221 72.9
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 5.5e-89 331.6 259 66.0
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 7.1e-89 331.3 254 65.4
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 7.1e-89 331.3 200 78.5
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 9.3e-89 330.9 193 78.8
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 9.3e-89 330.9 246 69.1
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 1.2e-88 330.5 223 70.4
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 2.7e-88 329.3 191 80.1
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 2.7e-88 329.3 207 75.4
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 2.7e-88 329.3 201 76.6
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 7.9e-88 327.8 253 66.8
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 1.8e-87 326.6 212 73.6
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 1.8e-87 326.6 286 59.1
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.1e-86 323.9 238 68.5
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.1e-86 323.9 200 75.0
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 3.3e-86 322.4 191 78.0
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 5.7e-86 321.6 224 71.4
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 7.4e-86 321.2 252 63.9
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 1.6e-85 320.1 225 70.7
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 8.2e-85 317.8 248 67.7
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 1.4e-84 317.0 192 78.1
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 5.0e-82 308.5 252 64.3
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.7e-80 302.8 232 63.4
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 7.9e-80 301.2 253 59.7
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.8e-79 300.1 265 57.0
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 3.3e-78 295.8 242 65.3
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 9.7e-78 294.3 252 61.9
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 1.7e-77 293.5 238 66.8
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 6.3e-77 291.6 193 71.5
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 4.1e-76 288.9 186 74.7
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 9.1e-76 287.7 200 69.5
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 4.5e-75 285.4 202 65.8
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 4.5e-75 285.4 178 70.2
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 2.9e-74 282.7 208 69.7
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.5e-73 279.6 197 69.5
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 6.7e-71 271.6 209 62.2
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 9.7e-70 267.7 178 74.2
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 7.0e-68 261.5 197 64.0
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.9e-65 253.4 270 56.7
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.0e-63 246.1 148 77.7
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 4.1e-60 235.7 255 52.5
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 1.3e-58 230.7 200 61.0
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.0e-55 219.5 173 60.7
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 9.1e-52 208.0 137 73.0
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.3e-50 204.1 192 56.8
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.5e-49 200.7 253 48.6
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 2.5e-49 199.9 195 50.3
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 3.2e-49 199.5 200 54.5
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 3.5e-43 179.5 167 59.9
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 4.5e-43 179.1 103 78.6
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 7.7e-43 178.3 105 81.0
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.0e-39 167.9 149 51.0
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 1.8e-23 114.0 218 38.5
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 2.0e-22 110.5 70 71.4
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 2.6e-22 110.2 71 76.1
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 2.5e-09 67.0 59 57.6


User provided reference genes

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