Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 7.7e-191 670.2 319 100.0
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 2.7e-111 406.0 268 72.0
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 3.3e-109 399.1 315 61.6
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 4.3e-109 398.7 269 69.5
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 2.6e-106 389.4 265 67.5
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 3.4e-106 389.0 273 65.9
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 1.4e-104 383.6 305 61.3
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 1.2e-103 380.6 261 67.0
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 2.1e-103 379.8 293 62.5
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.5e-103 379.0 307 60.6
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 6.0e-103 378.3 273 67.0
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 7.9e-103 377.9 263 67.7
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.3e-102 377.1 266 64.7
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 1.8e-102 376.7 280 63.9
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 3.9e-102 375.6 307 60.3
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 3.9e-102 375.6 259 67.2
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 5.1e-102 375.2 311 61.1
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 1.9e-101 373.2 311 58.8
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 3.3e-101 372.5 310 58.4
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 3.3e-101 372.5 264 64.8
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 5.6e-101 371.7 289 61.2
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 5.6e-101 371.7 319 55.5
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 9.6e-101 370.9 261 65.5
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 3.7e-100 369.0 271 63.5
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 3.7e-100 369.0 281 62.6
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 3.7e-100 369.0 274 62.8
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 6.2e-100 368.2 262 65.3
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 6.2e-100 368.2 253 67.2
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 6.2e-100 368.2 252 67.5
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 1.4e-99 367.1 278 60.8
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 4.0e-99 365.5 255 65.9
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 4.0e-99 365.5 274 62.0
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 9.0e-99 364.4 273 63.7
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 1.2e-98 364.0 255 63.9
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 1.5e-98 363.6 255 64.7
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 1.5e-98 363.6 255 65.9
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 2.6e-98 362.8 285 59.3
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 3.4e-98 362.5 260 67.3
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 4.5e-98 362.1 255 66.3
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 5.8e-98 361.7 316 57.6
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 5.8e-98 361.7 287 61.0
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 7.6e-98 361.3 285 58.9
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 1.0e-97 360.9 307 59.3
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 2.9e-97 359.4 322 55.9
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 2.9e-97 359.4 274 60.9
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 7.1e-96 354.8 256 65.6
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 7.1e-96 354.8 347 55.6
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 9.3e-96 354.4 286 58.7
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 2.1e-95 353.2 336 55.4
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 4.6e-95 352.1 301 57.5
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 3.0e-94 349.4 279 59.9
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 6.7e-94 348.2 254 62.2
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 8.7e-94 347.8 255 64.3
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 1.5e-93 347.1 279 57.0
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 1.9e-93 346.7 252 63.9
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 1.6e-92 343.6 234 68.4
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 1.8e-91 340.1 280 56.8
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 1.2e-90 337.4 250 61.2
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 1.2e-90 337.4 271 58.3
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 4.5e-90 335.5 270 59.3
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 4.5e-90 335.5 270 59.3
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 1.7e-89 333.6 250 61.6
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 2.9e-89 332.8 272 56.2
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 3.8e-89 332.4 278 57.9
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 6.5e-89 331.6 276 58.0
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 4.2e-88 328.9 271 59.4
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 6.1e-87 325.1 243 63.8
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 2.3e-86 323.2 264 59.8
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.2e-84 316.6 234 62.4
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 2.2e-84 316.6 308 54.5
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.8e-84 316.2 308 52.6
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 2.8e-84 316.2 252 61.1
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 2.8e-84 316.2 242 59.5
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 4.8e-84 315.5 234 62.0
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 2.0e-82 310.1 309 53.1
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 5.5e-80 302.0 296 52.7
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 6.1e-79 298.5 249 57.8
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 7.9e-79 298.1 264 56.4
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 5.1e-78 295.4 251 57.4
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 1.5e-74 283.9 335 48.7
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 4.5e-74 282.3 206 62.1
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 1.1e-67 261.2 203 60.1
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 5.5e-64 248.8 222 55.0
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 2.9e-57 226.5 181 56.4
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 3.2e-56 223.0 248 44.4
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 2.6e-53 213.4 249 43.0
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 4.8e-52 209.1 135 69.6
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 1.7e-49 200.7 256 39.8
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 5.2e-46 189.1 151 57.6
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 1.0e-41 174.9 108 67.6
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 6.1e-39 165.6 257 36.2
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 4.0e-38 162.9 136 59.6
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 6.8e-38 162.2 107 62.6
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 7.8e-34 148.7 83 73.5
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 2.3e-30 137.1 83 73.5
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 6.0e-26 122.5 289 29.1
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 6.0e-26 122.5 84 63.1
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 1.5e-24 117.9 129 50.4
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 1.4e-22 111.3 67 70.1
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 9.2e-19 98.6 55 72.7
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 9.2e-19 98.6 55 72.7
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 1.8e-14 84.3 73 58.9
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 1.8e-14 84.3 73 58.9
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 5.2e-14 82.8 87 46.0
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 5.2e-14 82.8 87 46.0
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 1.2e-13 81.6 61 62.3
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 8.4e-12 75.5 60 51.7
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 3.2e-11 73.6 62 48.4
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 5.4e-11 72.8 55 58.2
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.1e-08 65.1 95 40.0
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-08 63.9 42 59.5
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 5.6e-08 62.8 31 77.4
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 6.8e-06 55.8 82 42.7


User provided reference genes

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