Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 3.8e-224 781.2 398 100.0
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 2.1e-214 748.8 400 96.0
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.4e-141 506.9 402 62.7
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.0e-140 503.1 403 62.5
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 1.2e-137 493.8 404 63.4
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 1.6e-137 493.4 403 63.0
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 3.0e-136 489.2 406 64.0
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 1.5e-135 486.9 399 63.4
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 1.5e-135 486.9 407 62.9
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 2.0e-135 486.5 402 66.2
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 9.7e-135 484.2 403 63.0
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 8.2e-134 481.1 402 63.2
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.4e-133 480.3 396 62.4
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.4e-133 480.3 409 61.9
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 2.4e-133 479.6 395 62.5
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 2.0e-132 476.5 410 62.2
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 2.6e-132 476.1 412 60.9
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 3.5e-132 475.7 409 62.1
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 3.5e-132 475.7 398 64.1
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 5.9e-132 474.9 409 61.1
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 7.7e-132 474.6 403 61.8
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 7.7e-132 474.6 403 61.8
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 1.0e-131 474.2 421 60.3
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 1.3e-131 473.8 398 63.6
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 1.7e-131 473.4 407 60.9
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.8e-131 472.2 394 62.2
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.8e-131 472.2 408 61.0
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 1.9e-130 469.9 412 60.4
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 9.4e-130 467.6 399 61.7
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 9.4e-130 467.6 404 61.6
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.4e-128 463.8 412 59.5
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 1.8e-128 463.4 389 62.7
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 3.0e-128 462.6 405 60.5
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 3.0e-128 462.6 399 61.7
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 4.4e-127 458.8 402 60.2
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 7.5e-127 458.0 416 58.9
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 9.7e-127 457.6 402 60.2
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 1.6e-124 450.3 402 58.2
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 1.3e-123 447.2 409 60.1
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 2.9e-123 446.0 401 58.4
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 1.1e-122 444.1 409 59.4
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 1.1e-122 444.1 436 55.7
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 2.5e-122 443.0 404 57.4
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.2e-122 442.6 376 62.2
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 2.1e-121 439.9 405 57.3
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 2.1e-121 439.9 390 59.0
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 3.6e-121 439.1 385 60.8
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 2.3e-120 436.4 398 58.3
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 3.0e-120 436.0 411 56.0
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 8.8e-120 434.5 325 66.5
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 8.8e-120 434.5 390 58.2
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 1.5e-119 433.7 404 57.9
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 2.0e-119 433.3 418 57.7
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 2.0e-119 433.3 411 57.7
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 2.6e-119 433.0 403 58.8
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 5.7e-119 431.8 397 58.2
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 9.8e-119 431.0 306 69.9
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.3e-118 430.6 399 57.4
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 3.7e-118 429.1 399 56.1
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 1.1e-117 427.6 349 61.9
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 3.1e-117 426.0 400 58.0
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 1.6e-116 423.7 403 54.3
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 2.0e-116 423.3 384 57.6
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 5.9e-116 421.8 398 55.8
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 5.0e-115 418.7 398 55.5
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 5.0e-115 418.7 398 55.5
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 5.0e-115 418.7 398 55.5
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 5.0e-115 418.7 405 55.1
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 5.0e-115 418.7 405 55.6
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 6.6e-115 418.3 399 54.6
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 1.1e-114 417.5 399 54.1
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 4.2e-114 415.6 398 55.5
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 4.2e-114 415.6 405 54.1
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 2.8e-113 412.9 387 56.1
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 2.8e-113 412.9 398 53.5
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 8.0e-113 411.4 386 55.2
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.8e-112 410.2 398 58.0
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 1.8e-112 410.2 399 54.4
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 6.8e-112 408.3 289 66.8
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 8.9e-112 407.9 407 54.5
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 2.0e-111 406.8 398 54.5
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 1.6e-108 397.1 325 60.9
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 2.7e-108 396.4 271 69.4
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 1.2e-103 380.9 398 50.8
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.5e-103 380.6 327 57.2
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 4.4e-103 379.0 320 57.2
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 1.1e-101 374.4 395 51.4
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 1.4e-101 374.0 255 69.8
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 1.7e-99 367.1 394 50.3
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 8.6e-99 364.8 325 61.8
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 1.2e-97 360.9 401 50.1
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.6e-97 360.5 337 52.8
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 6.2e-97 358.6 245 67.8
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 2.3e-88 330.1 215 73.5
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 2.6e-87 326.6 312 56.4
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 1.8e-80 303.9 403 47.1
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 2.4e-77 293.5 406 43.8
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 2.4e-56 223.8 149 67.1
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 9.0e-56 221.9 303 38.3
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 1.3e-51 208.0 296 36.5
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 6.3e-49 199.1 222 51.4
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 3.1e-48 196.8 250 49.2
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 2.9e-46 190.3 299 37.1
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 1.6e-41 174.5 131 61.8
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 1.6e-41 174.5 131 61.8
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.4e-40 171.4 119 70.6
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 2.4e-40 170.6 263 36.5
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 3.1e-32 143.7 199 44.7
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 3.8e-30 136.7 159 45.3
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.1e-29 135.2 189 43.9
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 3.2e-29 133.7 96 68.8
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 6.7e-27 125.9 244 31.6
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 8.8e-19 99.0 209 31.6
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 8.0e-12 75.9 94 45.7
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 1.0e-11 75.5 92 46.7


User provided reference genes

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