Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 5.6e-72 274.2 146 100.0
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 5.6e-72 274.2 146 100.0
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 9.0e-46 187.2 141 65.2
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 5.8e-45 184.5 146 65.1
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 2.2e-44 182.6 146 63.0
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 1.1e-43 180.3 149 65.1
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 2.1e-42 176.0 145 60.7
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 3.5e-42 175.3 143 62.2
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 1.0e-41 173.7 150 64.0
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 1.0e-41 173.7 140 63.6
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.3e-41 173.3 153 58.8
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 2.3e-41 172.6 153 58.8
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 5.1e-41 171.4 151 58.3
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 5.1e-41 171.4 143 59.4
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 6.7e-41 171.0 140 62.1
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 6.7e-41 171.0 143 60.8
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 6.7e-41 171.0 150 58.7
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 1.1e-40 170.2 148 58.8
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 1.5e-40 169.9 154 61.0
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 1.9e-40 169.5 143 61.5
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 4.3e-40 168.3 152 58.6
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 7.4e-40 167.5 153 56.9
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 1.3e-39 166.8 148 57.4
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 2.2e-39 166.0 118 66.1
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 2.2e-39 166.0 145 57.2
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 2.2e-39 166.0 117 66.7
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 2.8e-39 165.6 118 66.1
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 4.8e-39 164.9 152 57.9
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 4.8e-39 164.9 153 56.2
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 8.2e-39 164.1 145 58.6
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 8.2e-39 164.1 150 59.3
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 8.2e-39 164.1 150 59.3
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 8.2e-39 164.1 149 60.4
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.1e-38 163.7 143 60.1
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 1.1e-38 163.7 148 58.8
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 1.1e-38 163.7 152 55.3
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 1.8e-38 162.9 145 57.9
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 1.8e-38 162.9 148 57.4
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 2.4e-38 162.5 155 56.8
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 2.4e-38 162.5 146 57.5
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 3.1e-38 162.2 156 57.7
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 3.1e-38 162.2 143 58.7
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 5.3e-38 161.4 110 67.3
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 6.9e-38 161.0 160 55.0
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 1.5e-37 159.8 143 58.7
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 2.0e-37 159.5 155 54.2
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 2.0e-37 159.5 153 56.2
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 3.4e-37 158.7 158 56.3
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 3.4e-37 158.7 153 58.8
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 5.9e-37 157.9 155 53.5
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 5.9e-37 157.9 155 53.5
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 7.7e-37 157.5 112 71.4
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 1.0e-36 157.1 114 68.4
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 1.3e-36 156.8 165 50.9
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.3e-36 156.8 149 54.4
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.7e-36 156.4 113 65.5
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 2.2e-36 156.0 140 55.7
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 2.9e-36 155.6 114 64.0
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 2.9e-36 155.6 146 56.2
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 3.8e-36 155.2 155 54.2
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 3.8e-36 155.2 155 54.2
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 3.8e-36 155.2 141 56.7
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 5.0e-36 154.8 117 62.4
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 6.5e-36 154.5 142 55.6
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 1.1e-35 153.7 140 55.0
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 1.4e-35 153.3 143 55.9
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.4e-35 153.3 113 63.7
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 1.9e-35 152.9 152 53.9
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 2.5e-35 152.5 143 56.6
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 2.5e-35 152.5 113 65.5
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 3.2e-35 152.1 117 61.5
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 5.5e-35 151.4 149 55.7
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 5.5e-35 151.4 144 51.4
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 9.4e-35 150.6 154 54.5
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 9.4e-35 150.6 143 51.0
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 9.4e-35 150.6 143 55.9
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 9.4e-35 150.6 142 51.4
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 9.4e-35 150.6 106 63.2
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 1.2e-34 150.2 143 58.7
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 1.2e-34 150.2 158 51.3
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 3.6e-34 148.7 142 54.2
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 7.9e-34 147.5 138 55.8
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.8e-33 146.4 111 64.0
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 5.1e-33 144.8 142 52.8
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 8.8e-33 144.1 144 52.1
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 5.7e-32 141.4 128 57.0
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 1.3e-31 140.2 149 51.0
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.3e-31 140.2 143 52.4
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 1.7e-31 139.8 134 50.7
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 1.7e-31 139.8 143 51.7
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 2.2e-31 139.4 98 72.4
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 3.1e-30 135.6 121 54.5
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 1.2e-29 133.7 95 63.2
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 1.5e-29 133.3 147 51.7
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 3.4e-29 132.1 100 66.0
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 1.3e-28 130.2 123 55.3
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 8.5e-28 127.5 103 62.1
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 5.5e-27 124.8 106 51.9
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 9.4e-27 124.0 87 60.9
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 4.7e-26 121.7 99 55.6
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 6.1e-26 121.3 119 55.5
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 2.3e-25 119.4 113 51.3
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.4e-24 115.2 116 55.2
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 1.4e-19 100.1 91 57.1
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 1.4e-17 93.6 87 58.6
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 6.3e-15 84.7 75 52.0
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 7.7e-13 77.8 77 51.9
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 1.6e-10 70.1 70 47.1
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 2.7e-10 69.3 88 47.7
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.4e-09 67.0 94 31.9
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 4.4e-08 62.0 98 32.7


User provided reference genes

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