Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 2.4e-41 171.8 90 100.0
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 5.4e-41 170.6 90 98.9
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 1.6e-29 132.5 88 75.0
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 2.1e-29 132.1 88 73.9
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 2.8e-29 131.7 88 75.0
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 2.8e-29 131.7 88 75.0
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 2.0e-27 125.6 87 75.9
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 2.6e-27 125.2 87 77.0
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 5.8e-27 124.0 88 72.7
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 9.9e-27 123.2 88 73.9
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 1.3e-26 122.9 88 73.9
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 1.3e-26 122.9 88 72.7
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 3.7e-26 121.3 88 70.5
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 3.7e-26 121.3 88 71.6
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 3.7e-26 121.3 89 69.7
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 4.9e-26 120.9 89 71.9
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 4.9e-26 120.9 87 73.6
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 6.4e-26 120.6 88 72.7
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 8.3e-26 120.2 88 72.7
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 8.3e-26 120.2 88 72.7
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 8.3e-26 120.2 88 72.7
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 8.3e-26 120.2 89 69.7
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 1.1e-25 119.8 88 75.0
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 1.1e-25 119.8 88 70.5
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.1e-25 119.8 88 69.3
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 1.4e-25 119.4 88 72.7
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 2.4e-25 118.6 88 69.3
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 3.2e-25 118.2 88 67.0
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 3.2e-25 118.2 88 71.6
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 4.1e-25 117.9 90 70.0
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 4.1e-25 117.9 88 69.3
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 4.1e-25 117.9 88 69.3
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 4.1e-25 117.9 88 69.3
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 9.2e-25 116.7 80 72.5
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 1.2e-24 116.3 88 68.2
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.2e-24 116.3 89 67.4
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 2.1e-24 115.5 88 69.3
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 2.1e-24 115.5 88 65.9
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 2.7e-24 115.2 87 70.1
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 2.7e-24 115.2 85 67.1
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 3.5e-24 114.8 88 65.9
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 3.5e-24 114.8 88 71.6
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 4.6e-24 114.4 90 66.7
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 4.6e-24 114.4 88 69.3
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 7.8e-24 113.6 88 67.0
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 1.0e-23 113.2 88 67.0
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 1.3e-23 112.8 88 64.8
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 1.3e-23 112.8 88 68.2
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 1.7e-23 112.5 84 66.7
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 1.7e-23 112.5 84 66.7
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 1.7e-23 112.5 88 68.2
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 2.3e-23 112.1 87 65.5
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 3.0e-23 111.7 90 65.6
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 3.9e-23 111.3 83 72.3
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 5.1e-23 110.9 90 68.9
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 5.1e-23 110.9 88 68.2
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 6.6e-23 110.5 88 69.3
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 6.6e-23 110.5 87 64.4
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 6.6e-23 110.5 89 64.0
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 8.6e-23 110.2 87 64.4
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 1.1e-22 109.8 89 65.2
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 1.1e-22 109.8 88 68.2
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 1.9e-22 109.0 78 67.9
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 1.9e-22 109.0 78 67.9
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 1.9e-22 109.0 78 67.9
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 1.9e-22 109.0 90 65.6
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 1.9e-22 109.0 90 65.6
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 3.3e-22 108.2 78 67.9
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 3.3e-22 108.2 78 67.9
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 3.3e-22 108.2 89 64.0
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 3.3e-22 108.2 84 65.5
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 3.3e-22 108.2 87 62.1
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 1.2e-21 106.3 87 62.1
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 2.8e-21 105.1 88 61.4
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 3.6e-21 104.8 87 62.1
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 4.7e-21 104.4 87 62.1
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 8.1e-21 103.6 87 60.9
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 8.1e-21 103.6 87 60.9
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 1.1e-20 103.2 87 60.9
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 1.1e-20 103.2 90 64.4
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 4.0e-20 101.3 84 67.9
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 4.0e-20 101.3 94 62.8
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 5.2e-20 100.9 88 62.5
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 8.9e-20 100.1 87 60.9
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 1.2e-19 99.8 87 58.6
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 1.2e-19 99.8 103 55.3
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 1.5e-19 99.4 84 66.7
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 5.8e-19 97.4 87 57.5
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 7.6e-19 97.1 82 64.6
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 9.9e-19 96.7 114 52.6
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 2.2e-18 95.5 124 47.6
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 2.2e-18 95.5 123 48.8
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 7.8e-16 87.0 83 63.9
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 7.8e-16 87.0 154 41.6
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 7.8e-16 87.0 154 41.6
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 3.0e-15 85.1 71 64.8
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 1.1e-14 83.2 59 72.9
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 1.5e-11 72.8 78 55.1
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 2.0e-11 72.4 89 51.7
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 2.0e-11 72.4 59 62.7
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 2.0e-11 72.4 77 54.5
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 3.4e-11 71.6 196 31.6
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 9.9e-11 70.1 61 57.4
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 4.9e-10 67.8 48 68.8
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 6.4e-10 67.4 48 66.7
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 3.2e-09 65.1 49 65.3
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 5.4e-09 64.3 41 80.5
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 7.1e-09 63.9 48 64.6
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 9.3e-09 63.5 58 62.1
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 2.1e-08 62.4 48 64.6
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 9.6e-06 53.5 54 61.1


User provided reference genes

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