Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 1.1e-286 989.2 482 100.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 4.1e-188 661.8 471 69.2
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 5.2e-183 644.8 470 67.7
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 8.3e-181 637.5 465 66.9
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 1.6e-179 633.3 469 66.5
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 1.6e-179 633.3 466 68.5
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 3.5e-179 632.1 468 68.2
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 1.3e-178 630.2 478 65.9
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 2.3e-178 629.4 466 67.8
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 5.1e-178 628.2 470 66.6
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 1.5e-177 626.7 472 66.3
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 5.6e-177 624.8 465 65.2
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 9.5e-177 624.0 465 65.8
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.2e-176 623.6 466 67.0
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 1.6e-176 623.2 466 67.2
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 6.2e-176 621.3 465 65.6
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 1.1e-175 620.5 463 68.0
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.3e-175 619.4 465 65.2
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 3.1e-175 619.0 479 64.9
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 3.1e-175 619.0 468 65.6
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 5.2e-175 618.2 476 64.3
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 8.9e-175 617.5 472 65.7
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 1.5e-174 616.7 471 66.0
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 3.4e-174 615.5 464 65.7
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 5.8e-174 614.8 471 65.8
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 7.5e-174 614.4 465 64.9
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 1.3e-173 613.6 460 66.1
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 2.2e-173 612.8 482 63.1
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 5.4e-172 608.2 477 64.8
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 5.4e-172 608.2 468 64.1
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 5.4e-172 608.2 473 65.1
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 9.2e-172 607.4 480 62.9
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 2.1e-171 606.3 472 64.6
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 3.5e-171 605.5 465 65.2
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 7.8e-171 604.4 464 65.3
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 7.8e-171 604.4 469 64.6
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 5.1e-170 601.7 469 63.1
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 1.2e-168 597.0 483 61.5
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 3.6e-168 595.5 475 63.2
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 6.2e-168 594.7 445 65.2
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 1.1e-167 594.0 463 64.4
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 1.8e-167 593.2 469 65.2
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 2.6e-166 589.3 484 62.2
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 1.3e-165 587.0 468 64.5
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 3.2e-164 582.4 451 65.0
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 7.1e-164 581.3 472 60.8
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 2.1e-163 579.7 445 64.7
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 4.6e-163 578.6 469 62.7
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 7.8e-163 577.8 466 63.9
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 1.3e-162 577.0 463 63.1
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 3.0e-162 575.9 463 62.9
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 6.6e-162 574.7 472 62.3
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 8.7e-162 574.3 464 62.7
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 1.9e-161 573.2 471 63.1
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 3.3e-161 572.4 441 65.5
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 4.3e-161 572.0 464 62.7
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 4.3e-161 572.0 467 62.3
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 7.3e-161 571.2 464 62.3
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 4.7e-160 568.5 467 62.5
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 1.8e-159 566.6 579 53.0
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 6.9e-159 564.7 483 59.0
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 9.9e-158 560.8 477 60.0
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 9.9e-158 560.8 470 61.3
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 4.9e-157 558.5 463 61.8
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 1.9e-156 556.6 447 62.6
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 1.6e-155 553.5 461 61.6
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 3.9e-154 548.9 494 58.9
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 6.2e-152 541.6 409 64.3
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.3e-149 533.9 459 61.2
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 3.8e-149 532.3 469 60.3
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 6.4e-149 531.6 377 69.2
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 8.4e-149 531.2 471 56.7
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.4e-148 530.4 477 59.5
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 5.4e-148 528.5 468 59.0
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 7.1e-148 528.1 510 55.5
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 3.9e-146 522.3 560 51.1
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 1.9e-145 520.0 486 54.3
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 8.1e-144 514.6 383 65.8
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 2.0e-142 510.0 379 65.7
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 2.0e-142 510.0 470 55.5
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 4.9e-141 505.4 520 52.5
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 5.6e-137 491.9 557 51.0
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 6.2e-136 488.4 531 49.3
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 1.8e-135 486.9 391 65.2
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 1.0e-133 481.1 496 50.4
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 2.9e-133 479.6 377 64.2
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 4.3e-129 465.7 378 63.2
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 4.3e-129 465.7 369 62.6
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 2.8e-128 463.0 381 61.9
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 3.7e-128 462.6 359 66.9
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 7.7e-126 454.9 399 59.6
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 1.3e-125 454.1 482 49.8
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 5.0e-125 452.2 370 62.2
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 9.7e-121 438.0 355 62.5
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 1.4e-119 434.1 368 61.1
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 2.6e-118 429.9 351 63.2
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 1.2e-115 421.0 350 63.4
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 2.1e-115 420.2 386 58.0
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 8.8e-114 414.8 481 47.4
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 4.8e-112 409.1 388 57.5
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.1e-103 381.3 372 54.3
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 2.6e-97 360.1 324 60.2
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 8.3e-96 355.1 309 59.2
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 2.0e-94 350.5 241 70.1
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 2.7e-86 323.6 270 62.2
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 3.6e-83 313.2 460 41.1
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 1.3e-77 294.7 514 34.8
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 2.7e-70 270.4 237 58.2
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 1.9e-60 237.7 143 75.5
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 7.6e-57 225.7 130 79.2
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 2.9e-56 223.8 360 35.6
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 5.8e-49 199.5 335 36.1
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 7.6e-49 199.1 212 51.4
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 2.9e-48 197.2 150 62.7
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 9.6e-44 182.2 375 37.9
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 2.6e-41 174.1 124 61.3
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 7.9e-38 162.5 95 76.8
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 8.7e-37 159.1 92 77.2
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 1.3e-35 155.2 94 75.5
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 2.4e-34 151.0 140 56.4
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 4.3e-20 103.6 83 61.4
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 4.2e-15 87.0 57 73.7
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.8e-13 81.6 43 81.4


User provided reference genes

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