Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 3.5e-65 251.5 132 100.0
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 3.8e-59 231.5 132 92.4
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.0e-19 100.5 118 50.8
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 6.5e-19 97.8 124 47.6
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 7.2e-18 94.4 118 48.3
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 7.2e-18 94.4 72 69.4
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 7.2e-18 94.4 113 49.6
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 1.2e-17 93.6 110 50.9
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 1.6e-17 93.2 75 60.0
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 1.6e-17 93.2 84 59.5
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 1.6e-17 93.2 62 74.2
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 1.6e-17 93.2 129 47.3
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 1.6e-17 93.2 100 47.0
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 2.1e-17 92.8 124 46.0
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 2.7e-17 92.4 75 60.0
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 2.7e-17 92.4 75 60.0
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 3.6e-17 92.0 99 48.5
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 3.6e-17 92.0 130 43.8
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 3.6e-17 92.0 134 47.8
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 8.0e-17 90.9 86 54.7
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 1.0e-16 90.5 63 66.7
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 1.0e-16 90.5 92 51.1
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 1.0e-16 90.5 104 50.0
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 1.4e-16 90.1 85 51.8
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.4e-16 90.1 85 51.8
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 1.4e-16 90.1 122 44.3
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 1.4e-16 90.1 123 44.7
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 1.4e-16 90.1 129 42.6
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 1.4e-16 90.1 95 51.6
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 1.8e-16 89.7 90 53.3
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 1.8e-16 89.7 63 68.3
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 2.3e-16 89.4 73 60.3
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 2.3e-16 89.4 79 54.4
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 3.0e-16 89.0 63 66.7
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 3.0e-16 89.0 63 66.7
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 3.9e-16 88.6 115 43.5
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 3.9e-16 88.6 119 44.5
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 3.9e-16 88.6 89 57.3
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 5.2e-16 88.2 125 48.8
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 8.8e-16 87.4 77 54.5
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 8.8e-16 87.4 63 66.7
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 8.8e-16 87.4 99 48.5
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 8.8e-16 87.4 99 50.5
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 8.8e-16 87.4 103 47.6
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 1.1e-15 87.0 63 65.1
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 1.1e-15 87.0 62 62.9
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 1.1e-15 87.0 120 44.2
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 2.0e-15 86.3 98 50.0
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 2.0e-15 86.3 120 45.0
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 2.0e-15 86.3 126 45.2
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 2.6e-15 85.9 99 47.5
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 2.6e-15 85.9 115 47.8
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 2.6e-15 85.9 115 48.7
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 3.3e-15 85.5 98 50.0
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 3.3e-15 85.5 98 50.0
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 4.4e-15 85.1 111 43.2
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 7.4e-15 84.3 123 43.1
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 7.4e-15 84.3 123 43.1
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 7.4e-15 84.3 128 41.4
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 9.7e-15 84.0 60 66.7
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 2.2e-14 82.8 79 55.7
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 2.2e-14 82.8 62 62.9
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 2.8e-14 82.4 99 46.5
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 2.8e-14 82.4 99 45.5
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 2.8e-14 82.4 77 58.4
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 3.7e-14 82.0 60 65.0
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 6.3e-14 81.3 77 57.1
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 8.2e-14 80.9 121 39.7
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 1.1e-13 80.5 49 75.5
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 1.4e-13 80.1 95 49.5
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 1.8e-13 79.7 61 60.7
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 1.8e-13 79.7 97 44.3
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 2.4e-13 79.3 115 39.1
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 2.4e-13 79.3 112 42.9
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 2.4e-13 79.3 72 52.8
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 3.1e-13 79.0 86 48.8
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 3.1e-13 79.0 51 70.6
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 4.1e-13 78.6 87 49.4
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 4.1e-13 78.6 105 47.6
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 5.3e-13 78.2 91 51.6
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 5.3e-13 78.2 62 56.5
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 7.0e-13 77.8 97 49.5
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 9.1e-13 77.4 80 50.0
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 1.6e-12 76.6 72 50.0
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 2.0e-12 76.3 96 43.8
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 2.0e-12 76.3 91 42.9
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 4.5e-12 75.1 54 66.7
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 7.7e-12 74.3 104 43.3
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 2.2e-11 72.8 117 41.0
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 2.9e-11 72.4 55 58.2
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 2.9e-11 72.4 69 47.8
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 3.8e-11 72.0 69 49.3
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 4.0e-08 62.0 55 50.9
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 4.4e-07 58.5 60 48.3
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 1.7e-06 56.6 95 34.7


User provided reference genes

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