Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 2.7e-178 629.0 437 100.0
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 1.6e-138 496.9 437 83.8
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.1e-46 191.8 389 39.8
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 3.2e-46 190.3 381 40.4
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 6.0e-45 186.0 378 40.2
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 1.9e-43 181.0 447 36.7
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 1.4e-41 174.9 445 44.0
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 1.8e-41 174.5 591 30.6
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 4.9e-39 166.4 499 33.9
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.4e-38 164.9 204 49.5
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 3.2e-38 163.7 468 32.7
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 9.3e-38 162.2 158 62.0
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 1.2e-37 161.8 157 62.4
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 1.2e-37 161.8 142 61.3
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 1.6e-37 161.4 386 35.2
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 2.7e-37 160.6 116 69.8
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 6.0e-37 159.5 453 39.3
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 1.0e-36 158.7 98 78.6
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 1.3e-36 158.3 99 75.8
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 3.0e-36 157.1 468 32.9
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 3.9e-36 156.8 96 79.2
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 6.7e-36 156.0 112 70.5
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 8.7e-36 155.6 407 36.4
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 8.7e-36 155.6 99 75.8
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 1.1e-35 155.2 388 39.9
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 1.9e-35 154.5 118 66.9
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 1.9e-35 154.5 101 74.3
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 1.9e-35 154.5 483 34.0
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 3.3e-35 153.7 445 33.7
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 3.3e-35 153.7 99 72.7
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 4.3e-35 153.3 434 34.8
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 4.3e-35 153.3 471 32.9
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 5.6e-35 152.9 114 67.5
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 5.6e-35 152.9 113 69.0
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 7.4e-35 152.5 492 31.9
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 7.4e-35 152.5 432 36.3
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 7.4e-35 152.5 153 56.2
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 9.6e-35 152.1 448 33.0
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 9.6e-35 152.1 476 34.0
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 9.6e-35 152.1 219 44.7
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 2.1e-34 151.0 442 39.8
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 2.1e-34 151.0 87 82.8
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 2.8e-34 150.6 490 31.8
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 3.7e-34 150.2 384 34.4
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 8.1e-34 149.1 392 41.1
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 8.1e-34 149.1 395 34.7
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 1.1e-33 148.7 439 39.9
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 2.4e-33 147.5 443 40.9
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 2.4e-33 147.5 152 56.6
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 2.4e-33 147.5 441 33.8
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 2.4e-33 147.5 435 40.9
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 2.4e-33 147.5 89 77.5
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 4.0e-33 146.7 378 38.6
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 4.0e-33 146.7 449 33.6
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 4.0e-33 146.7 388 34.8
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 5.3e-33 146.4 490 36.5
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 5.3e-33 146.4 437 33.9
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 6.9e-33 146.0 114 66.7
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 9.0e-33 145.6 378 39.4
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 9.0e-33 145.6 106 67.0
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 9.0e-33 145.6 494 34.8
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.2e-32 145.2 481 36.2
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 1.2e-32 145.2 159 50.9
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 2.0e-32 144.4 94 75.5
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 7.6e-32 142.5 534 30.3
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 1.3e-31 141.7 496 31.2
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 2.2e-31 141.0 458 30.8
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 2.9e-31 140.6 149 51.7
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 4.9e-31 139.8 114 61.4
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 8.4e-31 139.0 102 66.7
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 1.1e-30 138.7 118 65.3
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 1.1e-30 138.7 88 76.1
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.5e-30 137.5 441 29.7
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 2.5e-30 137.5 116 61.2
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 2.5e-30 137.5 116 61.2
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 4.2e-30 136.7 112 63.4
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 7.1e-30 136.0 454 32.2
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 7.1e-30 136.0 434 35.5
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 9.3e-30 135.6 456 35.1
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 1.2e-29 135.2 102 69.6
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 1.2e-29 135.2 99 67.7
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 1.6e-29 134.8 101 68.3
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 1.6e-29 134.8 101 68.3
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 1.6e-29 134.8 101 68.3
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 2.7e-29 134.0 101 68.3
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 2.7e-29 134.0 101 68.3
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 2.7e-29 134.0 143 55.2
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 7.9e-29 132.5 457 36.3
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 1.0e-28 132.1 99 69.7
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.3e-28 131.7 161 47.8
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 1.3e-28 131.7 114 62.3
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 1.8e-28 131.3 441 33.3
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.8e-28 131.3 507 34.7
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 1.8e-28 131.3 454 35.7
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 3.0e-28 130.6 130 55.4
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 3.0e-28 130.6 390 41.0
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 5.1e-28 129.8 100 66.0
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 5.1e-28 129.8 100 66.0
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 1.1e-27 128.6 552 30.4
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.1e-27 128.6 502 29.5
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 2.5e-27 127.5 386 33.7
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.5e-27 127.5 431 30.9
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 4.3e-27 126.7 149 56.4
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 7.4e-27 125.9 438 28.3
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 9.6e-27 125.6 542 33.0
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 1.3e-26 125.2 115 60.9
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.1e-25 122.1 430 33.0
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 1.4e-25 121.7 99 59.6
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 1.5e-24 118.2 157 47.8
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 5.9e-24 116.3 502 28.7
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-23 115.2 76 73.7
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 2.9e-23 114.0 100 58.0
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 5.0e-23 113.2 87 60.9
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 1.1e-22 112.1 468 40.4
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.0e-20 105.5 124 50.0
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 6.7e-20 102.8 100 57.0
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 2.5e-19 100.9 88 60.2
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 8.2e-18 95.9 62 74.2
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 1.1e-17 95.5 322 33.9
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.9e-15 87.4 61 67.2
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 3.8e-15 87.0 110 49.1
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 6.5e-15 86.3 598 28.3
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 3.9e-12 77.0 106 50.0
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 3.9e-12 77.0 418 30.6
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 4.3e-11 73.6 107 47.7
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 1.3e-10 72.0 52 67.3
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 4.8e-10 70.1 63 60.3
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 3.8e-07 60.5 388 29.6
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 1.9e-06 58.2 34 79.4
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 1.9e-06 58.2 34 79.4
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 5.5e-06 56.6 215 29.8


User provided reference genes

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