Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 3.8e-238 827.8 420 100.0
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 6.8e-163 577.8 414 71.3
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 8.6e-158 560.8 408 67.6
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 2.8e-156 555.8 386 73.1
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 1.8e-155 553.1 413 67.6
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 2.6e-154 549.3 412 68.2
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 7.6e-154 547.7 426 67.4
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 5.4e-152 541.6 411 67.4
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 2.3e-150 536.2 418 66.0
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 1.9e-149 533.1 414 67.1
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 1.9e-144 516.5 372 70.7
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 2.5e-141 506.1 408 64.2
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 2.1e-140 503.1 402 63.4
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 2.8e-140 502.7 383 67.6
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 3.6e-140 502.3 398 64.6
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 4.8e-140 501.9 419 61.6
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 4.8e-140 501.9 421 62.5
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 1.1e-139 500.7 417 62.6
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 1.8e-139 500.0 424 61.8
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 4.0e-139 498.8 424 61.8
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 1.2e-138 497.3 382 66.0
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 2.0e-138 496.5 434 60.4
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 4.5e-138 495.4 429 61.1
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 4.5e-138 495.4 430 60.9
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 7.6e-138 494.6 413 62.7
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 2.9e-137 492.7 399 63.7
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 2.9e-137 492.7 383 66.6
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 4.9e-137 491.9 407 63.1
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 1.1e-136 490.7 430 60.2
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 2.4e-136 489.6 423 60.3
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 4.2e-136 488.8 420 60.7
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 4.2e-136 488.8 397 63.5
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 7.1e-136 488.0 428 60.3
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 7.1e-136 488.0 354 67.5
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 4.6e-135 485.3 420 61.0
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 4.6e-135 485.3 400 63.5
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 5.1e-134 481.9 431 61.3
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 1.5e-133 480.3 374 64.4
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 1.9e-133 479.9 429 58.7
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 4.3e-133 478.8 432 59.0
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 9.6e-133 477.6 387 63.6
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 9.6e-133 477.6 393 64.1
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 1.3e-132 477.2 415 59.0
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 1.3e-132 477.2 392 65.6
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 3.7e-132 475.7 415 58.8
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 4.8e-132 475.3 412 59.7
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 8.1e-132 474.6 402 63.9
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 1.4e-131 473.8 385 62.6
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 4.0e-131 472.2 423 58.6
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 4.0e-131 472.2 398 63.6
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 6.9e-131 471.5 435 58.2
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 1.5e-130 470.3 378 65.6
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 2.6e-130 469.5 415 58.8
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 5.8e-130 468.4 428 59.3
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 2.2e-129 466.5 444 57.0
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 3.8e-129 465.7 411 59.4
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 8.4e-129 464.5 421 58.9
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 1.2e-127 460.7 375 65.1
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 6.0e-127 458.4 411 58.4
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 7.9e-127 458.0 418 58.4
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.3e-126 457.2 384 63.3
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 1.3e-126 457.2 387 63.3
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 3.0e-126 456.1 418 58.6
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 6.7e-126 454.9 379 61.5
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 8.7e-126 454.5 382 62.3
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 1.9e-125 453.4 418 58.4
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 1.9e-125 453.4 418 58.4
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 4.3e-125 452.2 411 58.4
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 9.6e-125 451.1 414 58.5
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 2.8e-124 449.5 417 57.6
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 3.7e-124 449.1 418 57.4
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 4.8e-124 448.7 401 59.9
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 6.2e-124 448.4 418 57.7
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 8.2e-124 448.0 386 61.1
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 9.0e-123 444.5 418 58.1
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 9.0e-123 444.5 418 58.1
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 1.5e-122 443.7 420 57.6
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 2.0e-122 443.4 431 55.0
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 3.4e-122 442.6 411 56.7
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 1.7e-121 440.3 420 57.4
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 2.2e-121 439.9 380 61.1
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 8.4e-121 438.0 380 60.3
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 3.2e-120 436.0 381 58.8
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 5.5e-120 435.3 391 60.1
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 7.1e-120 434.9 387 59.7
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 3.5e-119 432.6 391 59.8
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 8.7e-118 427.9 371 60.9
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 1.5e-117 427.2 384 58.1
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 2.8e-116 422.9 380 60.3
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 3.1e-115 419.5 370 60.5
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 3.1e-115 419.5 351 61.5
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 4.1e-115 419.1 327 67.3
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 6.9e-115 418.3 472 51.9
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 1.2e-114 417.5 385 59.0
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 1.7e-113 413.7 382 60.2
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 1.7e-113 413.7 348 61.5
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 5.0e-113 412.1 397 55.7
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 1.8e-110 403.7 359 61.6
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 3.0e-110 402.9 338 63.0
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 1.8e-99 367.1 455 46.6
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 4.1e-99 365.9 402 51.0
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.8e-91 340.5 244 70.9
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 2.9e-89 333.2 437 48.1
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 2.1e-87 327.0 302 56.3
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 1.5e-85 320.9 435 45.7
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 3.5e-82 309.7 439 42.6
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 3.5e-82 309.7 439 42.6
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 3.1e-75 286.6 383 43.9
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 2.7e-66 256.9 157 80.3
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 4.4e-37 159.8 394 33.2
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 6.6e-33 146.0 121 58.7
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 6.6e-33 146.0 179 46.4
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 1.8e-30 137.9 300 34.7
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 1.2e-29 135.2 128 54.7
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 1.1e-16 92.0 77 57.1
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 3.3e-16 90.5 186 34.9
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 1.3e-15 88.6 141 37.6
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 4.9e-12 76.6 47 68.1
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 9.3e-11 72.4 47 66.0
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 9.3e-11 72.4 47 66.0
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 6.0e-10 69.7 49 61.2
MBI05_g08284_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 6.0e-10 69.7 73 47.9
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 2.3e-09 67.8 51 58.8
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.3e-08 63.9 150 40.7
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 2.8e-07 60.8 92 46.7
Cfa027053 Carpinus fangiana HOM05D006541 ORTHO05D124901 2.4e-06 57.8 322 23.9


User provided reference genes

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