Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0483 Papaver somniferum HOM05D005606 ORTHO05D006446 1.5e-311 1072.0 543 100.0
PSO782G3878 Papaver somniferum HOM05D005606 ORTHO05D006446 4.2e-306 1053.9 544 98.3
Nn4g24861 Nelumbo nucifera HOM05D005606 ORTHO05D006446 2.2e-206 722.6 537 67.8
Aqoxy3G04204 Aquilegia oxysepala HOM05D005606 ORTHO05D006446 7.1e-197 691.0 537 65.7
Dinv09771 Davidia involucrata HOM05D005606 ORTHO05D006446 8.8e-179 630.9 541 61.9
PGSC0003DMG400025630 Solanum tuberosum HOM05D005606 ORTHO05D006446 1.9e-173 613.2 543 58.7
SalBow5G2126 Salvia bowleyana HOM05D005606 ORTHO05D006446 8.8e-171 604.4 542 58.3
Lj5A166G73 Lonicera japonica HOM05D005606 ORTHO05D006446 5.7e-170 601.7 541 59.0
Solyc03g098340.4 Solanum lycopersicum HOM05D005606 ORTHO05D006446 7.4e-170 601.3 543 58.0
Sopen03g029090 Solanum pennellii HOM05D005606 ORTHO05D006446 7.4e-170 601.3 543 58.0
Rhsim08G0124400 Rhododendron simsii HOM05D005606 ORTHO05D006446 1.3e-169 600.5 544 58.6
MD05G1278400 Malus domestica HOM05D005606 ORTHO05D006446 5.5e-165 585.1 550 58.9
TWI81G0505 Tripterygium wilfordii HOM05D005606 ORTHO05D006446 1.6e-164 583.6 547 58.0
Potri.001G013300 Populus trichocarpa HOM05D005606 ORTHO05D006446 2.7e-164 582.8 545 59.1
SGA_v2.0_scaffold90G27762 Striga asiatica HOM05D005606 ORTHO05D006446 8.8e-163 577.8 543 56.5
Prupe.4G086400 Prunus persica HOM05D005606 ORTHO05D006446 2.6e-162 576.2 553 58.6
Sabra01G0009700 Salix brachista HOM05D005606 ORTHO05D006446 1.7e-161 573.5 563 57.5
GSVIVG01012914001 Vitis vinifera HOM05D005606 ORTHO05D006446 8.3e-161 571.2 542 58.3
Atru.chr9.366 Acer truncatum HOM05D005606 ORTHO05D006446 1.8e-160 570.1 547 58.5
MSTRG.11550 Avicennia marina HOM05D005606 ORTHO05D006446 2.4e-160 569.7 542 56.3
CANSAT35G0050 Cannabis sativa HOM05D005606 ORTHO05D006446 3.5e-159 565.8 550 57.1
RcHm_v2.0_Chr5g0015011 Rosa chinensis HOM05D005606 ORTHO05D006446 3.5e-159 565.8 545 57.4
Manes.03G090364 Manihot esculenta HOM05D005606 ORTHO05D006446 5.9e-159 565.1 543 56.5
Ciclev10023713m.g Citrus clementina HOM05D005606 ORTHO05D006446 1.7e-158 563.5 545 59.1
CiPaw.09G118900 Carya illinoinensis HOM05D005606 ORTHO05D006446 3.8e-158 562.4 560 55.9
Actinidia37370 Actinidia chinensis HOM05D005606 ORTHO05D006446 3.2e-157 559.3 513 58.1
Cc04_g08790 Coffea canephora HOM05D005606 ORTHO05D006446 9.4e-157 557.8 543 55.1
CSS0018749 Camellia sinensis var. sinensis HOM05D005606 ORTHO05D006446 8.0e-156 554.7 548 56.2
Eucgr.K02306 Eucalyptus grandis HOM05D005606 ORTHO05D006446 8.0e-156 554.7 547 55.2
FvH4_3g04970 Fragaria vesca HOM05D005606 ORTHO05D006446 3.0e-155 552.7 543 56.4
Migut.O00253 Erythranthe guttata HOM05D005606 ORTHO05D006446 6.8e-155 551.6 544 54.0
Manes.15G103000 Manihot esculenta HOM05D005606 ORTHO05D006446 4.4e-154 548.9 543 55.6
FAN11G2201 Fragaria x ananassa HOM05D005606 ORTHO05D006446 5.7e-154 548.5 543 56.2
FAN21G0753 Fragaria x ananassa HOM05D005606 ORTHO05D006446 7.5e-154 548.1 545 55.4
FAN16G3646 Fragaria x ananassa HOM05D005606 ORTHO05D006446 2.8e-153 546.2 542 55.5
FAN25G1117 Fragaria x ananassa HOM05D005606 ORTHO05D006446 4.9e-153 545.4 542 55.7
arahy.Tifrunner.gnm1.ann1.XD6SW7 Arachis hypogaea HOM05D005606 ORTHO05D006446 1.2e-151 540.8 540 55.2
Cfa000886 Carpinus fangiana HOM05D005606 ORTHO05D006446 5.9e-151 538.5 560 56.4
MD10G1257000 Malus domestica HOM05D005606 ORTHO05D006446 1.7e-150 537.0 553 55.0
PGR044G1587 Punica granatum HOM05D005606 ORTHO05D006446 1.1e-149 534.3 548 55.7
ClCG01G024960 Citrullus lanatus HOM05D005606 ORTHO05D006446 7.2e-149 531.6 553 53.5
Cpa.g.sc111.40 Carica papaya HOM05D005606 ORTHO05D006446 9.5e-149 531.2 543 54.9
CsaV3_6G052120 Cucumis sativus L. HOM05D005606 ORTHO05D006446 1.2e-148 530.8 553 53.5
QL05p054675 Quercus lobata HOM05D005606 ORTHO05D006446 5.2e-147 525.4 695 47.8
CDE04G0503 Ceratophyllum demersum HOM05D005606 ORTHO05D006446 1.5e-146 523.9 487 55.9
Sed0004896 Sechium edule HOM05D005606 ORTHO05D006446 2.0e-146 523.5 553 53.3
Oeu023545.1 Olea europaea HOM05D005606 ORTHO05D006446 9.8e-146 521.2 544 52.6
Sed0002755 Sechium edule HOM05D005606 ORTHO05D006446 5.4e-144 515.4 549 52.6
arahy.Tifrunner.gnm1.ann1.KIB2TD Arachis hypogaea HOM05D000001 ORTHO05D006446 9.2e-144 514.6 525 54.7
Peaxi162Scf00171g00427 Petunia axillaris HOM05D005606 ORTHO05D006446 1.2e-143 514.2 540 51.7
Lalb_Chr20g0117701 Lupinus albus HOM05D005606 ORTHO05D006446 3.5e-143 512.7 540 53.5
DCAR_010217 Daucus carota HOM05D005606 ORTHO05D006446 5.9e-143 511.9 535 52.1
Gohir.A08G038700 Gossypium hirsutum HOM05D005606 ORTHO05D006446 1.0e-142 511.1 536 53.4
Thecc.03G071900 Theobroma cacao HOM05D005606 ORTHO05D006446 1.7e-142 510.4 536 53.0
Oeu038484.2 Olea europaea HOM05D005606 ORTHO05D006446 1.5e-141 507.3 579 48.4
arahy.Tifrunner.gnm1.ann1.J0D3J2 Arachis hypogaea HOM05D005606 ORTHO05D006446 3.3e-141 506.1 527 53.7
EL10Ac8g19487 Beta vulgaris HOM05D005606 ORTHO05D006446 5.6e-141 505.4 540 52.2
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 5.6e-141 505.4 444 59.5
Lj6g0007906 Lotus japonicus HOM05D005606 ORTHO05D006446 5.6e-141 505.4 542 53.7
Hund06728 Selenicereus undatus HOM05D005606 ORTHO05D006446 9.5e-141 504.6 543 52.1
Gorai.004G048400 Gossypium raimondii HOM05D005606 ORTHO05D006446 1.2e-140 504.2 536 52.8
Glyma.15G091800 Glycine max HOM05D005606 ORTHO05D006446 2.1e-140 503.4 536 53.0
TAR629G2351 Trochodendron aralioides HOM05D005606 ORTHO05D006446 2.3e-139 500.0 381 67.7
Gohir.D08G048900 Gossypium hirsutum HOM05D005606 ORTHO05D006446 4.0e-139 499.2 536 53.0
MELO3C007099.2 Cucumis melo HOM05D005606 ORTHO05D006446 8.9e-139 498.0 578 50.3
Lsat_1_v5_gn_8_221 Lactuca sativa HOM05D005606 ORTHO05D006446 2.6e-138 496.5 540 53.5
Nitab4.5_0004612g0090 Nicotiana tabacum HOM05D005606 ORTHO05D006446 4.4e-138 495.7 543 52.9
Duzib211G0450 Durio zibethinus HOM05D005606 ORTHO05D006446 5.8e-138 495.4 536 52.6
arahy.Tifrunner.gnm1.ann1.P0FE7Q Arachis hypogaea HOM05D005606 ORTHO05D006446 2.7e-135 486.5 471 55.4
Sc04g0004710 Simmondsia chinensis HOM05D005606 ORTHO05D006446 7.8e-135 485.0 541 51.6
Ca_00517_v3 Cicer arietinum L. HOM05D005606 ORTHO05D006446 1.1e-131 474.6 540 50.2
CDE02G0130 Ceratophyllum demersum HOM05D005606 ORTHO05D006446 3.1e-131 473.0 467 54.2
Medtr2g018830 Medicago truncatula HOM05D005606 ORTHO05D006446 4.0e-131 472.6 539 50.5
Glyma.13G220600 Glycine max HOM05D005606 ORTHO05D006446 8.9e-131 471.5 538 51.7
AUR62041591 Chenopodium quinoa HOM05D005606 ORTHO05D006446 9.8e-130 468.0 484 53.7
HanXRQChr05g0141141 Helianthus annuus HOM05D005606 ORTHO05D006446 6.4e-129 465.3 540 50.0
Thhalv10018404m.g Eutrema salsugineum HOM05D005606 ORTHO05D006446 1.6e-127 460.7 539 50.5
THA.LOC104810627 Tarenaya hassleriana HOM05D005606 ORTHO05D006446 4.3e-125 452.6 546 49.6
AL2G33010 Arabidopsis lyrata HOM05D005606 ORTHO05D006446 2.8e-124 449.9 539 48.8
Sp5g28210 Schrenkiella parvula HOM05D005606 ORTHO05D006446 2.8e-124 449.9 540 49.1
BcaC08g46742 Brassica carinata HOM05D005606 ORTHO05D006446 1.4e-123 447.6 541 49.5
AT1G73240 Arabidopsis thaliana HOM05D005606 ORTHO05D006446 1.8e-123 447.2 539 49.0
SEGI_11499 Sequoiadendron giganteum HOM05D005606 ORTHO05D006446 8.9e-123 444.9 549 45.9
VMungo0540G1265 Vigna mungo HOM05D005606 ORTHO05D006446 8.9e-123 444.9 524 49.6
BolC6t39777H Brassica oleracea HOM05D005606 ORTHO05D006446 1.2e-122 444.5 541 49.5
C06p47380 Brassica napus HOM05D005606 ORTHO05D006446 2.0e-122 443.7 541 49.2
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 7.6e-122 441.8 482 51.9
Phvul.006G167500 Phaseolus vulgaris HOM05D005606 ORTHO05D006446 1.1e-120 438.0 536 46.8
BcaB03g15036 Brassica carinata HOM05D005606 ORTHO05D006446 1.4e-120 437.6 541 48.1
BraA07t31468Z Brassica rapa HOM05D005606 ORTHO05D006446 3.2e-120 436.4 540 48.5
A07p39190 Brassica napus HOM05D005606 ORTHO05D006446 7.1e-120 435.3 540 48.3
Carub.0002s2004 Capsella rubella HOM05D005606 ORTHO05D006446 1.6e-119 434.1 539 47.3
CARHR066250 Cardamine hirsuta HOM05D005606 ORTHO05D006446 2.1e-119 433.7 540 46.7
Aa31LG4G3530 Aethionema arabicum HOM05D005606 ORTHO05D006446 1.3e-118 431.0 540 48.7
Psat1g191760 Pisum sativum HOM05D005606 ORTHO05D006446 1.4e-112 411.0 353 59.2
MBI06_g43804_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 6.2e-108 395.6 384 56.0
Medtr8g007580 Medicago truncatula HOM05D005606 ORTHO05D006446 1.1e-104 384.8 553 45.0
Nitab4.5_0001180g0240 Nicotiana tabacum HOM05D005606 ORTHO05D006446 1.0e-102 378.3 560 42.1
Zm00001eb250810 Zea mays HOM05D005606 ORTHO05D006446 3.6e-100 369.8 393 48.6
vmacro17739 Vaccinium macrocarpon HOM05D005606 ORTHO05D006446 2.2e-97 360.5 367 53.7
Medtr8g008810 Medicago truncatula HOM05D005606 ORTHO05D006446 5.1e-94 349.4 327 56.0
ATR0824G067 Amborella trichopoda HOM05D005606 ORTHO05D006446 3.3e-93 346.7 380 47.6
Potri.003G213050 Populus trichocarpa HOM05D005606 ORTHO05D006446 2.3e-86 323.9 280 59.6
Mapoly0061s0120 Marchantia polymorpha HOM05D005606 ORTHO05D006446 1.1e-85 321.6 575 37.9
Pp3c23_16320 Physcomitrium patens HOM05D005606 ORTHO05D006446 1.1e-85 321.6 560 37.5
AagrBONN_evm.TU.Sc2ySwM_228.2052 Anthoceros agrestis HOM05D005606 ORTHO05D006446 2.9e-81 307.0 564 36.7
MBI06_g39886_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 7.2e-80 302.4 279 58.8
AUR62042457 Chenopodium quinoa HOM05D005606 ORTHO05D006446 1.8e-78 297.7 327 52.0
Zm00001eb187400 Zea mays HOM05D005606 ORTHO05D006446 1.7e-73 281.2 398 41.2
Os02g0684300 Oryza sativa ssp. japonica HOM05D005606 ORTHO05D006446 4.2e-72 276.6 263 55.1
MBI06_g21907_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 2.7e-71 273.9 266 57.9
SMO358G0536 Selaginella moellendorffii HOM05D005606 ORTHO05D006446 1.8e-70 271.2 478 37.7
TPR.G7652 Trifolium pratense HOM05D005606 ORTHO05D006446 4.8e-68 263.1 209 61.7
CBR_g11193 Chara braunii HOM05D005606 ORTHO05D006446 6.7e-62 242.7 416 37.0
ATR0879G001 Amborella trichopoda HOM05D005606 ORTHO05D006446 3.1e-59 233.8 196 58.2
Lj9C350G3 Lonicera japonica HOM05D005606 ORTHO05D006446 3.1e-59 233.8 272 48.9
unitig_750.g28452 Utricularia gibba HOM05D005606 ORTHO05D006446 5.0e-57 226.5 345 42.9
Hma1.2p1_0403F.1_g145180 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 1.2e-55 221.9 165 66.1
Hma1.2p1_0403F.1_g145190 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 1.6e-50 204.9 159 64.2
Haze_05701 Corylus avellana HOM05D005606 ORTHO05D006446 6.5e-49 199.5 266 48.1
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 5.4e-43 179.9 151 60.9
ATR0824G212 Amborella trichopoda HOM05D005606 ORTHO05D006446 1.9e-40 171.4 163 55.2
Aqoxy3G04211 Aquilegia oxysepala HOM05D005606 ORTHO05D006446 1.5e-37 161.8 272 43.4
ECA233G5513 Erigeron canadensis HOM05D005606 ORTHO05D006446 9.8e-37 159.1 197 48.7
vmacro17738 Vaccinium macrocarpon HOM05D005606 ORTHO05D006446 2.8e-31 141.0 123 59.3
TPR.G20455 Trifolium pratense HOM05D005606 ORTHO05D006446 3.4e-29 134.0 119 59.7
Hma1.2p1_2967F.1_g331010 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 8.3e-28 129.4 243 38.3
Hma1.2p1_0403F.1_g145170 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 3.2e-27 127.5 243 37.9
Medtr8g008813 Medicago truncatula HOM05D005606 ORTHO05D006446 2.0e-26 124.8 137 49.6
Medtr0199s0020 Medicago truncatula HOM05D005606 ORTHO05D006446 3.2e-19 100.9 154 42.9
TPR.G26262 Trifolium pratense HOM05D005606 ORTHO05D006446 2.0e-13 81.6 181 35.9
Ah.15g099030 Amaranthus hybridus HOM05D002838 ORTHO05D002114 1.7e-12 78.6 114 43.9
Actinidia09048 Actinidia chinensis HOM05D005606 ORTHO05D006446 1.4e-06 58.9 81 39.5
Sabra03G0155900 Salix brachista HOM05D005606 ORTHO05D006446 5.2e-06 57.0 62 48.4
Sabra03G0159100 Salix brachista HOM05D005606 ORTHO05D006446 5.2e-06 57.0 62 48.4
Oeu061196.1 Olea europaea HOM05D005606 ORTHO05D006446 6.8e-06 56.6 96 36.5


User provided reference genes

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