Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 0.0e+00 1112.4 611 100.0
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 1.1e-206 723.8 438 95.4
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 7.9e-160 568.2 536 62.9
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 6.9e-156 555.1 544 61.8
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 3.8e-154 549.3 548 60.9
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 3.7e-149 532.7 499 62.7
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 1.0e-146 524.6 303 93.4
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 7.1e-145 518.5 526 59.3
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 3.4e-139 499.6 545 56.0
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.9e-137 493.8 501 58.9
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 6.7e-135 485.3 502 59.4
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 7.4e-134 481.9 546 55.5
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 9.7e-134 481.5 537 57.4
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 6.3e-133 478.8 547 54.5
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 5.9e-131 472.2 548 54.7
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.0e-130 471.5 515 56.1
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 2.9e-130 469.9 572 53.1
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 5.0e-130 469.2 502 57.8
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.6e-128 464.2 548 54.6
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 6.1e-128 462.2 548 54.2
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 6.7e-127 458.8 498 56.2
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 8.8e-127 458.4 507 56.0
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 1.5e-126 457.6 508 58.1
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 4.5e-123 446.0 573 50.3
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 3.8e-122 443.0 503 54.7
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 5.0e-122 442.6 504 55.6
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 1.4e-121 441.0 500 56.2
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.2e-121 439.9 502 54.2
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 9.4e-121 438.3 498 54.8
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 9.4e-121 438.3 500 53.8
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 9.4e-121 438.3 502 55.8
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 6.7e-119 432.2 500 53.8
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 1.7e-114 417.5 560 49.6
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 2.9e-114 416.8 470 56.2
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.7e-112 410.2 560 48.0
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.6e-112 409.8 562 47.9
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 6.1e-112 409.1 534 52.1
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.8e-111 407.5 561 48.1
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 1.2e-110 404.8 503 51.9
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 1.3e-109 401.4 580 46.9
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 4.8e-109 399.4 533 49.5
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 1.8e-108 397.5 504 50.8
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 2.4e-108 397.1 511 49.7
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 2.4e-108 397.1 510 51.0
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 1.2e-107 394.8 627 45.1
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.5e-105 387.9 503 51.5
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 5.5e-105 386.0 437 55.8
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 7.2e-105 385.6 499 51.7
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 1.6e-104 384.4 563 47.6
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 2.1e-104 384.0 505 49.7
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 2.1e-104 384.0 505 49.7
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 1.4e-103 381.3 501 49.9
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 8.3e-101 372.1 514 49.0
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 1.1e-100 371.7 508 48.4
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 3.1e-100 370.2 504 49.6
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 7.7e-99 365.5 499 48.9
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 2.9e-98 363.6 504 48.6
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 1.4e-95 354.8 506 47.4
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 3.0e-95 353.6 502 48.4
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 4.0e-95 353.2 506 47.2
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 4.0e-95 353.2 506 47.2
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 8.9e-95 352.1 473 49.0
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 1.5e-94 351.3 508 47.8
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 2.6e-94 350.5 441 52.8
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 4.4e-94 349.7 503 48.3
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 5.7e-94 349.4 499 46.1
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 9.8e-94 348.6 501 47.3
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 2.2e-93 347.4 508 49.2
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 8.3e-93 345.5 503 47.3
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 5.4e-92 342.8 544 45.0
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 5.0e-90 336.3 503 45.7
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 6.6e-90 335.9 492 45.9
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 2.8e-88 330.5 450 50.2
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 8.9e-87 325.5 362 58.0
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 5.8e-78 296.2 437 48.5
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.9e-74 283.5 427 45.7
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 3.6e-72 276.9 495 41.8
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 4.6e-67 260.0 376 48.9
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 7.1e-60 236.1 254 54.3
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 7.1e-60 236.1 397 41.1
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 6.9e-47 193.0 317 44.2
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 4.5e-38 163.7 320 41.6
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 5.8e-38 163.3 178 51.7
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 7.4e-33 146.4 323 36.5
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 1.3e-29 135.6 261 38.7
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 1.3e-26 125.6 538 28.8
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 4.3e-25 120.6 80 77.5
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.2e-24 118.2 76 82.9
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 6.9e-23 113.2 239 37.7
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 5.9e-22 110.2 166 47.0
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.9e-20 105.1 159 49.7
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 4.2e-20 104.0 108 52.8
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 1.0e-18 99.4 72 68.1
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 6.3e-16 90.1 53 90.6
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 5.3e-15 87.0 66 60.6
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 2.0e-14 85.1 674 26.7
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.0e-10 72.8 44 84.1
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 5.1e-10 70.5 40 87.5
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 3.7e-08 64.3 67 50.7
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 1.1e-07 62.8 61 59.0
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 1.1e-07 62.8 61 59.0


User provided reference genes

Program Settings